AT1G27060 : -
Query Information
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AGICode AT1G27060
Description Regulator of chromosome condensation (RCC1) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G27060 Regulator of chromosome condensation (RCC1) family protein 1 0.34 -0.28
2 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.71 0.3 -0.3
3 AT1G79400 cation/H+ exchanger 2 cation/H+ exchanger 2, cation/H+
exchanger 2		 0.69 0.3 -0.31
4 AT3G47570 Leucine-rich repeat protein kinase family protein 0.69 0.32 -0.32
5 AT3G24840 Sec14p-like phosphatidylinositol transfer family protein -0.66 0.31 -0.33
6 AT2G16365 F-box family protein -0.66 0.3 -0.31
7 AT2G27170 Structural maintenance of chromosomes (SMC) family protein STRUCTURAL MAINTENANCE OF
CHROMOSOMES 3, TITAN7		 -0.65 0.3 -0.34
8 AT5G37380 Chaperone DnaJ-domain superfamily protein -0.65 0.31 -0.32
9 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.31
10 AT3G33064 transposable element gene -0.65 0.32 -0.32
11 AT3G18040 MAP kinase 9 MAP kinase 9 -0.64 0.32 -0.31
12 AT3G01310 Phosphoglycerate mutase-like family protein -0.64 0.34 -0.31
13 AT1G09060 Zinc finger, RING-type;Transcription factor
jumonji/aspartyl beta-hydroxylase		 -0.63 0.32 -0.32
14 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 0.63 0.32 -0.33
15 AT4G16680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.31 -0.31
16 AT2G39410 alpha/beta-Hydrolases superfamily protein 0.62 0.32 -0.32
17 AT5G59410 Rab5-interacting family protein 0.62 0.32 -0.31
18 AT5G13180 NAC domain containing protein 83 NAC domain containing protein 83,
NAC domain containing protein 83,
VND-interacting 2		 -0.62 0.3 -0.32
19 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 -0.62 0.3 -0.33
20 AT1G03040 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.62 0.31 -0.32
21 AT1G04600 myosin XI A ATXIA, myosin XI A 0.62 0.31 -0.3
22 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.61 0.31 -0.32
23 AT1G63830 PLAC8 family protein -0.61 0.31 -0.31
24 AT1G77600 ARM repeat superfamily protein -0.61 0.3 -0.29
25 AT2G35150 EXORDIUM like 1 EXORDIUM LIKE 7 0.61 0.29 -0.3
26 AT5G04240 Zinc finger (C2H2 type) family protein / transcription
factor jumonji (jmj) family protein		 EARLY FLOWERING 6 -0.61 0.31 -0.32
27 AT3G44700 Plant protein of unknown function 0.6 0.32 -0.35
28 AT1G69340 appr-1-p processing enzyme family protein -0.6 0.31 -0.31
29 AT1G22670 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.6 0.31 -0.31
30 AT1G66830 Leucine-rich repeat protein kinase family protein -0.6 0.31 -0.3
31 AT5G01260 Carbohydrate-binding-like fold -0.6 0.31 -0.3
32 AT3G45830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi
- 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131
(source: NCBI BLink).		 -0.6 0.31 -0.32
33 AT1G61680 terpene synthase 14 TERPENE SYNTHASE 14, terpene
synthase 14		 0.59 0.33 -0.34
34 AT2G20580 26S proteasome regulatory subunit S2 1A 26S PROTEASOME REGULATORY SUBUNIT
S2 1A, 26S proteasome regulatory
subunit S2 1A		 -0.59 0.33 -0.31
35 AT2G15830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G33960.1); Has 18 Blast hits to 18 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.34 -0.32
36 AT1G56300 Chaperone DnaJ-domain superfamily protein -0.59 0.31 -0.31
37 AT4G10490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.3 -0.29
38 AT1G04330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.59 0.33 -0.31
39 AT5G27080 Transducin family protein / WD-40 repeat family protein AtCDC20.3, cell division cycle
20.3		 0.58 0.33 -0.32
40 AT1G34545 transposable element gene 0.58 0.31 -0.31
41 AT2G39320 Cysteine proteinases superfamily protein 0.58 0.32 -0.32
42 AT1G12930 ARM repeat superfamily protein -0.58 0.31 -0.35
43 AT1G14910 ENTH/ANTH/VHS superfamily protein -0.58 0.3 -0.31
44 AT2G40316 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 27
(InterPro:IPR018939); Has 138 Blast hits to 138 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi -
62; Plants - 33; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.58 0.33 -0.34
45 AT3G05510 Phospholipid/glycerol acyltransferase family protein -0.58 0.31 -0.33
46 AT3G43040 transposable element gene -0.58 0.31 -0.33
47 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.31 -0.32
48 AT5G63640 ENTH/VHS/GAT family protein -0.57 0.31 -0.34
49 AT2G06510 replication protein A 1A ARABIDOPSIS THALIANA REPLICATION
PROTEIN A 1A, ARABIDOPSIS THALIANA
RPA70-KDA SUBUNIT A, replication
protein A 1A, RPA70-KDA SUBUNIT A		 -0.57 0.3 -0.3
50 AT1G20735 F-box and associated interaction domains-containing protein 0.57 0.3 -0.32
51 AT5G51610 Ribosomal protein L11 family protein 0.57 0.32 -0.33
52 AT2G26020 plant defensin 1.2b plant defensin 1.2b 0.57 0.31 -0.34
53 AT4G25520 SEUSS-like 1 SEUSS-like 1 -0.57 0.33 -0.31
54 AT1G73760 RING/U-box superfamily protein -0.57 0.31 -0.3
55 ATMG01240 hypothetical protein ORF100C -0.57 0.32 -0.34
56 AT4G22790 MATE efflux family protein 0.57 0.32 -0.31
57 AT1G64210 Leucine-rich repeat protein kinase family protein -0.57 0.33 -0.33
58 AT5G35410 Protein kinase superfamily protein SALT OVERLY SENSITIVE 2,
CBL-INTERACTING PROTEIN KINASE 24,
SNF1-RELATED PROTEIN KINASE 3.11,
SALT OVERLY SENSITIVE 2		 -0.56 0.32 -0.32
59 AT4G30070 low-molecular-weight cysteine-rich 59 low-molecular-weight cysteine-rich
59		 0.56 0.33 -0.31
60 AT2G47020 Peptide chain release factor 1 0.56 0.33 -0.33
61 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.33 -0.34
62 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.32 -0.3
63 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 0.56 0.32 -0.28
64 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.32 -0.31
65 AT1G37537 transposable element gene 0.56 0.3 -0.31
66 AT2G04300 Leucine-rich repeat protein kinase family protein -0.55 0.33 -0.35
67 AT1G18700 DNAJ heat shock N-terminal domain-containing protein -0.55 0.31 -0.3
68 AT1G27630 cyclin T 1;3 cyclin T 1;3 -0.55 0.33 -0.31
69 AT1G80040 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system
component Cue (InterPro:IPR003892); BEST Arabidopsis
thaliana protein match is: Ubiquitin system component Cue
protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.29 -0.33
70 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein 0.54 0.33 -0.32
71 AT2G01080 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.54 0.31 -0.33
72 AT2G30800 helicase in vascular tissue and tapetum ATVT-1, helicase in vascular
tissue and tapetum		 -0.54 0.32 -0.32
73 AT3G01750 Ankyrin repeat family protein -0.54 0.31 -0.3
74 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.54 0.31 -0.35
75 AT1G19170 Pectin lyase-like superfamily protein 0.54 0.33 -0.32
76 AT2G47980 sister-chromatid cohesion protein 3 SISTER-CHROMATID COHESION PROTEIN
3, sister-chromatid cohesion
protein 3		 -0.54 0.29 -0.29
77 AT4G39790 Protein of unknown function (DUF630 and DUF632) 0.54 0.32 -0.32
78 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.32 -0.33
79 AT3G17280 F-box and associated interaction domains-containing protein 0.53 0.31 -0.3
80 AT3G55300 transposable element gene 0.53 0.32 -0.32
81 AT2G33480 NAC domain containing protein 41 NAC domain containing protein 41,
NAC domain containing protein 41		 0.53 0.31 -0.3
82 AT3G60730 Plant invertase/pectin methylesterase inhibitor superfamily 0.53 0.34 -0.32
83 AT1G61920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; Has 3 Blast hits to 3 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.53 0.34 -0.31
84 AT5G07520 glycine-rich protein 18 ATGRP-8, ATGRP18, glycine-rich
protein 18		 0.52 0.32 -0.32
85 AT5G44420 plant defensin 1.2 LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
77, plant defensin 1.2, PLANT
DEFENSIN 1.2A		 0.52 0.31 -0.3
86 AT3G06280 F-box associated ubiquitination effector family protein 0.52 0.32 -0.31
87 AT5G28680 Malectin/receptor-like protein kinase family protein ANXUR2 0.52 0.29 -0.33
88 AT2G17430 Seven transmembrane MLO family protein ATMLO7, MILDEW RESISTANCE LOCUS O
7, NORTIA		 0.52 0.28 -0.33
89 AT3G23350 ENTH/VHS family protein 0.51 0.33 -0.28
90 AT4G33310 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.31 -0.34
91 AT1G02720 galacturonosyltransferase 5 galacturonosyltransferase 5 0.51 0.32 -0.32
92 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 0.51 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0173 MST_2301.7 - - - -0.68 0.42 -0.42
94 C0213 PR_MST_2410.2 - - - -0.6 0.44 -0.42