AGICode | AT1G22910 |
Description | RNA-binding (RRM/RBD/RNP motifs) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G22910 | RNA-binding (RRM/RBD/RNP motifs) family protein | 1 | 0.33 | -0.28 | |||
2 | AT5G51810 | gibberellin 20 oxidase 2 | AT2353, ATGA20OX2, gibberellin 20 oxidase 2 |
-0.63 | 0.34 | -0.3 | ||
3 | AT4G20910 | double-stranded RNA binding protein-related / DsRBD protein-related |
CORYMBOSA 2, HUA ENHANCER 1 | -0.62 | 0.32 | -0.32 | ||
4 | AT3G17120 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.3 | -0.34 | |||
5 | AT2G26960 | myb domain protein 81 | myb domain protein 81, myb domain protein 81 |
0.6 | 0.31 | -0.32 | ||
6 | AT5G48530 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07440.1); Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.33 | -0.32 | |||
7 | AT1G55330 | arabinogalactan protein 21 | arabinogalactan protein 21, ARABINOGALACTAN PROTEIN 21 |
0.59 | 0.32 | -0.31 | ||
8 | AT1G22140 | unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.58 | 0.33 | -0.33 | |||
9 | AT5G43360 | phosphate transporter 1;3 | ATPT4, phosphate transporter 1;3, PHOSPHATE TRANSPORTER 3 |
0.57 | 0.32 | -0.3 | ||
10 | AT2G44770 | ELMO/CED-12 family protein | 0.57 | 0.3 | -0.32 | |||
11 | AT1G36000 | LOB domain-containing protein 5 | LOB domain-containing protein 5 | 0.56 | 0.31 | -0.32 | ||
12 | AT2G47490 | NAD+ transporter 1 | ARABIDOPSIS THALIANA NAD+ TRANSPORTER 1, NAD+ transporter 1 |
0.56 | 0.32 | -0.31 | ||
13 | AT4G00050 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
unfertilized embryo sac 10 | 0.55 | 0.31 | -0.34 | ||
14 | AT1G48950 | C3HC zinc finger-like | -0.54 | 0.3 | -0.32 | |||
15 | AT4G39753 | Galactose oxidase/kelch repeat superfamily protein | 0.54 | 0.32 | -0.32 | |||
16 | AT1G27130 | glutathione S-transferase tau 13 | glutathione S-transferase tau 13, GLUTATHIONE S-TRANSFERASE 12, glutathione S-transferase tau 13 |
0.54 | 0.32 | -0.34 | ||
17 | AT1G77140 | vacuolar protein sorting 45 | ATVPS45, vacuolar protein sorting 45 |
0.53 | 0.29 | -0.3 | ||
18 | AT1G55960 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.53 | 0.31 | -0.33 | |||
19 | AT3G55020 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.53 | 0.33 | -0.31 | |||
20 | AT5G62950 | RNA polymerase II, Rpb4, core protein | 0.52 | 0.3 | -0.33 | |||
21 | AT1G16800 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.52 | 0.27 | -0.31 | |||
22 | AT2G47300 | ribonuclease Ps | -0.52 | 0.31 | -0.31 | |||
23 | AT3G28870 | CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Sec63 domain (InterPro:IPR004179); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24260.1); Has 531 Blast hits to 527 proteins in 118 species: Archae - 0; Bacteria - 10; Metazoa - 251; Fungi - 29; Plants - 170; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). |
0.52 | 0.32 | -0.32 | |||
24 | AT5G57310 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.52 | 0.32 | -0.31 | |||
25 | AT5G05680 | nuclear pore complex protein-related | EMBRYO DEFECTIVE 2789, MODIFIER OF SNC1,7 |
-0.52 | 0.32 | -0.32 | ||
26 | AT3G04590 | AT hook motif DNA-binding family protein | 0.52 | 0.34 | -0.3 | |||
27 | AT1G58340 | MATE efflux family protein | BUSH-AND-CHLOROTIC-DWARF 1, ZF14, ZRIZI |
-0.52 | 0.3 | -0.29 | ||
28 | AT4G22400 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18320.2); Has 44 Blast hits to 44 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.3 | -0.31 | |||
29 | AT1G11880 | transferases, transferring hexosyl groups | 0.51 | 0.28 | -0.31 | |||
30 | AT5G28490 | Protein of unknown function (DUF640) | LIGHT-DEPENDENT SHORT HYPOCOTYLS 1, ORGAN BOUNDARY 2 |
0.51 | 0.33 | -0.3 | ||
31 | AT3G05080 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.31 | -0.32 | |||
32 | AT1G58160 | Mannose-binding lectin superfamily protein | 0.5 | 0.29 | -0.31 | |||
33 | AT1G69080 | Adenine nucleotide alpha hydrolases-like superfamily protein |
0.5 | 0.3 | -0.34 | |||
34 | AT3G25020 | receptor like protein 42 | receptor like protein 42, receptor like protein 42 |
0.5 | 0.31 | -0.32 | ||
35 | AT2G18070 | unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2); Has 27 Blast hits to 27 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.3 | -0.31 | |||
36 | AT2G35670 | VEFS-Box of polycomb protein | FERTILIZATION-INDEPENDENT ENDOSPERM 2, FERTILIZATION INDEPENDENT SEED 2 |
-0.49 | 0.32 | -0.33 | ||
37 | AT2G24340 | sequence-specific DNA binding transcription factors | 0.49 | 0.31 | -0.3 | |||
38 | AT2G16160 | transposable element gene | -0.49 | 0.3 | -0.31 | |||
39 | AT1G52770 | Phototropic-responsive NPH3 family protein | -0.48 | 0.32 | -0.3 | |||
40 | AT1G68580 | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein |
-0.48 | 0.3 | -0.31 | |||
41 | AT2G46310 | cytokinin response factor 5 | cytokinin response factor 5 | -0.48 | 0.31 | -0.32 | ||
42 | AT2G23460 | extra-large G-protein 1 | ATXLG1, extra-large G-protein 1 | -0.48 | 0.29 | -0.29 | ||
43 | AT3G11020 | DRE/CRT-binding protein 2B | DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DRE/CRT-binding protein 2B |
-0.48 | 0.32 | -0.31 | ||
44 | AT2G18880 | vernalization5/VIN3-like | vernalization5/VIN3-like 2, VIN3-like 3 |
0.47 | 0.32 | -0.32 | ||
45 | AT5G01980 | RING/U-box superfamily protein | -0.47 | 0.31 | -0.33 | |||
46 | AT3G50730 | Protein kinase superfamily protein | -0.47 | 0.3 | -0.32 | |||
47 | AT5G11300 | mitotic-like cyclin 3B from Arabidopsis | CYC2BAT, mitotic-like cyclin 3B from Arabidopsis, CYCLIN A2;2 |
0.47 | 0.33 | -0.33 | ||
48 | AT4G36450 | mitogen-activated protein kinase 14 | mitogen-activated protein kinase 14, MPK14, mitogen-activated protein kinase 14 |
-0.47 | 0.33 | -0.33 | ||
49 | AT4G36290 | compromised recognition of TCV 1 | compromised recognition of TCV 1 | -0.47 | 0.31 | -0.29 | ||
50 | AT2G37820 | Cysteine/Histidine-rich C1 domain family protein | 0.47 | 0.33 | -0.34 | |||
51 | AT5G07200 | gibberellin 20-oxidase 3 | ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, gibberellin 20-oxidase 3, YAP169 |
-0.46 | 0.29 | -0.32 | ||
52 | AT5G62160 | zinc transporter 12 precursor | zinc transporter 12 precursor, zinc transporter 12 precursor |
-0.45 | 0.34 | -0.31 | ||
53 | AT3G52270 | Transcription initiation factor IIF, beta subunit | -0.45 | 0.31 | -0.33 | |||
54 | AT5G41540 | Disease resistance protein (TIR-NBS-LRR class) family | -0.44 | 0.31 | -0.32 | |||
55 | AT5G60820 | RING/U-box superfamily protein | -0.44 | 0.32 | -0.31 | |||
56 | AT2G42030 | RING/U-box superfamily protein | -0.44 | 0.32 | -0.3 | |||
57 | AT2G01510 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.43 | 0.31 | -0.32 | |||
58 | AT2G28640 | exocyst subunit exo70 family protein H5 | exocyst subunit exo70 family protein H5, exocyst subunit exo70 family protein H5 |
-0.42 | 0.31 | -0.31 |