AT1G71850 : -
Query Information
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AGICode AT1G71850
Description Ubiquitin carboxyl-terminal hydrolase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G71850 Ubiquitin carboxyl-terminal hydrolase family protein 1 0.32 -0.32
2 AT5G09840 Putative endonuclease or glycosyl hydrolase 0.86 0.32 -0.35
3 AT4G25730 FtsJ-like methyltransferase family protein 0.86 0.32 -0.31
4 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.85 0.34 -0.33
5 AT1G79150 binding 0.85 0.31 -0.31
6 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.85 0.29 -0.33
7 AT1G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 40 Blast hits to 40 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.85 0.34 -0.33
8 AT2G34357 ARM repeat superfamily protein 0.84 0.31 -0.29
9 AT3G13940 DNA binding;DNA-directed RNA polymerases 0.84 0.33 -0.32
10 AT5G12220 las1-like family protein 0.83 0.33 -0.33
11 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.83 0.32 -0.32
12 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.83 0.34 -0.31
13 AT3G21540 transducin family protein / WD-40 repeat family protein 0.83 0.31 -0.33
14 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 0.82 0.3 -0.32
15 AT1G13160 ARM repeat superfamily protein 0.82 0.32 -0.32
16 AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.31 -0.28
17 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.82 0.3 -0.31
18 AT5G11240 transducin family protein / WD-40 repeat family protein 0.82 0.32 -0.3
19 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 0.82 0.34 -0.31
20 AT3G11964 RNA binding;RNA binding 0.82 0.31 -0.31
21 AT3G61240 DEA(D/H)-box RNA helicase family protein 0.81 0.33 -0.33
22 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.81 0.31 -0.29
23 AT4G04940 transducin family protein / WD-40 repeat family protein 0.81 0.32 -0.33
24 AT4G15770 RNA binding 0.81 0.32 -0.32
25 AT3G58660 Ribosomal protein L1p/L10e family 0.81 0.29 -0.31
26 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.81 0.3 -0.3
27 AT5G50315 transposable element gene 0.81 0.32 -0.32
28 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.81 0.31 -0.32
29 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.81 0.33 -0.3
30 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).		 0.81 0.3 -0.31
31 AT1G30960 GTP-binding family protein 0.81 0.31 -0.32
32 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.8 0.31 -0.3
33 AT1G15740 Leucine-rich repeat family protein -0.8 0.31 -0.3
34 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.8 0.32 -0.32
35 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8 0.32 -0.32
36 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.8 0.31 -0.3
37 AT5G52820 WD-40 repeat family protein / notchless protein, putative 0.8 0.29 -0.3
38 AT5G16930 AAA-type ATPase family protein 0.8 0.33 -0.3
39 AT3G15000 cobalt ion binding 0.8 0.31 -0.31
40 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.8 0.29 -0.3
41 AT4G25340 FK506 BINDING PROTEIN 53 ATFKBP53, FK506 BINDING PROTEIN 53 0.8 0.32 -0.32
42 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 0.8 0.29 -0.34
43 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.79 0.31 -0.31
44 AT5G59980 Polymerase/histidinol phosphatase-like 0.79 0.32 -0.33
45 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.3 -0.31
46 AT3G15460 Ribosomal RNA processing Brix domain protein 0.79 0.32 -0.3
47 AT3G06530 ARM repeat superfamily protein 0.79 0.32 -0.31
48 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.79 0.32 -0.3
49 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.79 0.32 -0.31
50 AT1G69250 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.79 0.31 -0.32
51 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.79 0.31 -0.31
52 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.33 -0.3
53 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.78 0.31 -0.3
54 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 0.78 0.31 -0.32
55 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein -0.78 0.33 -0.31
56 AT4G23540 ARM repeat superfamily protein 0.78 0.31 -0.33
57 AT5G05210 Surfeit locus protein 6 0.77 0.31 -0.32
58 AT3G26782 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.34 -0.32
59 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.77 0.31 -0.32
60 AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.33 -0.32
61 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.77 0.33 -0.32
62 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10		 0.77 0.32 -0.31
63 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 0.77 0.31 -0.3
64 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.32 -0.31
65 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 0.77 0.31 -0.31
66 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.76 0.32 -0.33
67 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f -0.76 0.31 -0.29
68 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 0.76 0.33 -0.31
69 AT5G46920 Intron maturase, type II family protein 0.76 0.33 -0.32
70 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 0.76 0.31 -0.32
71 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE 0.76 0.32 -0.31
72 AT4G03430 pre-mRNA splicing factor-related EMBRYO DEFECTIVE 2770, STABILIZED
1		 0.76 0.31 -0.31
73 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 0.76 0.29 -0.32
74 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.76 0.34 -0.33
75 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.76 0.3 -0.3
76 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 0.75 0.31 -0.3
77 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.3 -0.33
78 AT5G14580 polyribonucleotide nucleotidyltransferase, putative 0.75 0.3 -0.32
79 AT1G51380 DEA(D/H)-box RNA helicase family protein 0.75 0.32 -0.33
80 AT4G28480 DNAJ heat shock family protein 0.75 0.29 -0.32
81 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.75 0.33 -0.33
82 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.31 -0.32
83 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 0.75 0.32 -0.31
84 AT3G53950 glyoxal oxidase-related protein -0.74 0.32 -0.31
85 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.31 -0.32
86 AT1G28060 Pre-mRNA-splicing factor 3 0.74 0.31 -0.31
87 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.3 -0.31
88 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.74 0.34 -0.31
89 AT5G53400 HSP20-like chaperones superfamily protein BOBBER1 0.74 0.3 -0.31
90 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.74 0.33 -0.3
91 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.74 0.32 -0.32
92 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.73 0.31 -0.32
93 AT1G09415 NIM1-interacting 3 NIM1-interacting 3 -0.72 0.31 -0.32
94 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.72 0.34 -0.31
95 AT5G37930 Protein with RING/U-box and TRAF-like domains -0.72 0.33 -0.32
96 AT4G31270 sequence-specific DNA binding transcription factors -0.71 0.33 -0.31
97 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.71 0.33 -0.33
98 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12		 -0.71 0.29 -0.31
99 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.71 0.32 -0.33
100 AT4G29890 choline monooxygenase, putative (CMO-like) -0.7 0.32 -0.31
101 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.69 0.32 -0.32
102 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.34 -0.32
103 AT3G18270 cytochrome P450, family 77, subfamily A, polypeptide 5
pseudogene		 cytochrome P450, family 77,
subfamily A, polypeptide 5
pseudogene		 -0.68 0.31 -0.3
104 AT5G54980 Uncharacterised protein family (UPF0497) -0.68 0.33 -0.32
105 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.68 0.33 -0.33
106 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein -0.68 0.34 -0.3
107 AT1G33780 Protein of unknown function (DUF179) -0.68 0.34 -0.29
108 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4		 -0.67 0.34 -0.31
109 AT4G02120 CTP synthase family protein -0.67 0.32 -0.31
110 AT1G27290 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.33
111 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.31 -0.33
112 AT5G52420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.3 -0.32
113 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.3 -0.29
114 AT2G25350 Phox (PX) domain-containing protein -0.66 0.32 -0.32
115 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.31 -0.31
116 AT1G16730 unknown protein 6 unknown protein 6 -0.66 0.35 -0.33
117 AT2G23780 RING/U-box superfamily protein -0.66 0.3 -0.32
118 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 -0.66 0.31 -0.34
119 AT2G38820 Protein of unknown function (DUF506) -0.65 0.32 -0.32
120 AT1G77930 Chaperone DnaJ-domain superfamily protein -0.65 0.3 -0.32
121 AT4G01330 Protein kinase superfamily protein -0.65 0.31 -0.31
122 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.34 -0.29
123 AT3G11620 alpha/beta-Hydrolases superfamily protein -0.64 0.3 -0.32
124 AT3G19800 Protein of unknown function (DUF177) -0.64 0.31 -0.31
125 AT3G13672 TRAF-like superfamily protein -0.64 0.32 -0.34
126 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 -0.63 0.31 -0.3
127 AT5G47720 Thiolase family protein -0.63 0.33 -0.32
128 AT5G03230 Protein of unknown function, DUF584 -0.63 0.32 -0.33
129 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.63 0.31 -0.34
130 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family -0.63 0.33 -0.32
131 AT1G56280 drought-induced 19 drought-induced 19,
drought-induced 19		 -0.62 0.33 -0.33
132 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.62 0.31 -0.3
133 AT2G41760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function WDYHV (InterPro:IPR019161); Has 201 Blast
hits to 201 proteins in 90 species: Archae - 0; Bacteria -
2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 -0.62 0.32 -0.35
134 AT1G28320 protease-related DEG15 -0.61 0.32 -0.32
135 AT2G45740 peroxin 11D peroxin 11D -0.61 0.31 -0.33
136 AT3G02700 NC domain-containing protein-related -0.6 0.32 -0.31
137 AT3G44280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.33 -0.33
138 AT2G18670 RING/U-box superfamily protein -0.6 0.31 -0.3
139 AT3G18295 Protein of unknown function (DUF1639) -0.6 0.3 -0.31
140 AT4G01510 Arv1-like protein ARV2 -0.6 0.3 -0.34