AT3G03040 : -
Query Information
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AGICode AT3G03040
Description F-box/RNI-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G03040 F-box/RNI-like superfamily protein 1 0.32 -0.28
2 AT3G49500 RNA-dependent RNA polymerase 6 RNA-dependent RNA polymerase 6,
SILENCING DEFECTIVE 1, SUPPRESSOR
OF GENE SILENCING 2		 0.83 0.33 -0.3
3 AT5G49360 beta-xylosidase 1 BETA-XYLOSIDASE 1, beta-xylosidase
1		 0.83 0.34 -0.31
4 AT3G07720 Galactose oxidase/kelch repeat superfamily protein -0.82 0.32 -0.32
5 AT3G48360 BTB and TAZ domain protein 2 ATBT2, BTB and TAZ domain protein
2		 0.81 0.31 -0.31
6 AT2G29990 alternative NAD(P)H dehydrogenase 2 alternative NAD(P)H dehydrogenase
2		 -0.8 0.33 -0.32
7 AT1G51090 Heavy metal transport/detoxification superfamily protein -0.8 0.3 -0.33
8 AT1G23050 hydroxyproline-rich glycoprotein family protein 0.8 0.29 -0.29
9 AT1G67360 Rubber elongation factor protein (REF) -0.8 0.32 -0.32
10 AT2G17990 BEST Arabidopsis thaliana protein match is:
kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to
6129 proteins in 783 species: Archae - 220; Bacteria -
1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses -
38; Other Eukaryotes - 1653 (source: NCBI BLink).		 -0.8 0.32 -0.31
11 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.8 0.3 -0.29
12 AT5G51770 Protein kinase superfamily protein -0.79 0.32 -0.32
13 AT2G38465 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; Has 16 Blast hits to 16 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.79 0.31 -0.31
14 AT4G22756 sterol C4-methyl oxidase 1-2 ATSMO1-2, sterol C4-methyl oxidase
1-2		 0.79 0.31 -0.29
15 AT2G29070 Ubiquitin fusion degradation UFD1 family protein -0.78 0.31 -0.33
16 AT2G21620 Adenine nucleotide alpha hydrolases-like superfamily
protein		 RD2 -0.78 0.3 -0.31
17 AT4G03400 Auxin-responsive GH3 family protein DWARF IN LIGHT 2, GH3-10 -0.78 0.32 -0.32
18 AT1G54730 Major facilitator superfamily protein 0.78 0.31 -0.31
19 AT4G27830 beta glucosidase 10 beta glucosidase 10 -0.78 0.32 -0.31
20 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.31 -0.32
21 AT1G37130 nitrate reductase 2 ARABIDOPSIS NITRATE REDUCTASE 2,
B29, CHLORATE RESISTANT 3, nitrate
reductase 2, NIA2-1, NITRATE
REDUCTASE, NITRATE REDUCTASE 2		 0.77 0.31 -0.32
22 AT1G62570 flavin-monooxygenase glucosinolate S-oxygenase 4 flavin-monooxygenase glucosinolate
S-oxygenase 4		 -0.77 0.31 -0.34
23 AT4G37300 maternal effect embryo arrest 59 maternal effect embryo arrest 59 0.77 0.31 -0.31
24 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 -0.77 0.33 -0.32
25 AT5G05420 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.77 0.32 -0.31
26 AT4G11600 glutathione peroxidase 6 glutathione peroxidase 6,
glutathione peroxidase 6, LSC803,
PHGPX		 -0.77 0.3 -0.31
27 AT1G78070 Transducin/WD40 repeat-like superfamily protein -0.77 0.33 -0.31
28 AT3G16800 Protein phosphatase 2C family protein -0.76 0.32 -0.31
29 AT5G24810 ABC1 family protein -0.76 0.3 -0.35
30 AT3G15180 ARM repeat superfamily protein -0.76 0.32 -0.33
31 AT1G73480 alpha/beta-Hydrolases superfamily protein -0.76 0.31 -0.32
32 AT5G13200 GRAM domain family protein -0.76 0.31 -0.33
33 AT5G24470 pseudo-response regulator 5 pseudo-response regulator 5,
pseudo-response regulator 5		 -0.76 0.32 -0.32
34 AT4G36830 GNS1/SUR4 membrane protein family HOS3-1 -0.76 0.3 -0.33
35 AT5G47120 BAX inhibitor 1 ARABIDOPSIS BAX INHIBITOR 1, BAX
inhibitor 1, BI-1, BAX inhibitor 1		 -0.76 0.34 -0.31
36 AT3G47560 alpha/beta-Hydrolases superfamily protein 0.76 0.29 -0.31
37 AT5G35460 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2838 (InterPro:IPR021261); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.76 0.3 -0.31
38 AT3G23280 XB3 ortholog 5 in Arabidopsis thaliana XB3 ortholog 5 in Arabidopsis
thaliana		 -0.75 0.31 -0.32
39 AT1G71950 Proteinase inhibitor, propeptide -0.75 0.3 -0.32
40 AT2G47890 B-box type zinc finger protein with CCT domain -0.75 0.31 -0.31
41 AT3G23880 F-box and associated interaction domains-containing protein 0.75 0.31 -0.32
42 AT1G15520 pleiotropic drug resistance 12 ATP-binding cassette G40,
Arabidopsis thaliana ATP-binding
cassette G40, PLEIOTROPIC DRUG
RESISTANCE 12, pleiotropic drug
resistance 12		 -0.75 0.31 -0.32
43 AT1G76890 Duplicated homeodomain-like superfamily protein AT-GT2, GT2 0.75 0.33 -0.33
44 AT3G52740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits
to 65 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.33 -0.29
45 AT1G28050 B-box type zinc finger protein with CCT domain -0.75 0.32 -0.34
46 AT3G08710 thioredoxin H-type 9 thioredoxin H-type 9, thioredoxin
H-type 9, THIOREDOXIN TYPE H 9		 -0.75 0.32 -0.33
47 AT4G02880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03290.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.74 0.34 -0.32
48 AT3G53230 ATPase, AAA-type, CDC48 protein -0.74 0.29 -0.31
49 AT4G25640 detoxifying efflux carrier 35 detoxifying efflux carrier 35,
detoxifying efflux carrier 35,
FLOWER FLAVONOID TRANSPORTER		 -0.74 0.33 -0.33
50 AT4G30600 signal recognition particle receptor alpha subunit family
protein		 -0.74 0.32 -0.31
51 AT2G30750 cytochrome P450, family 71, subfamily A, polypeptide 12 cytochrome P450, family 71,
subfamily A, polypeptide 12		 -0.74 0.32 -0.32
52 AT5G23850 Arabidopsis thaliana protein of unknown function (DUF821) -0.74 0.35 -0.33
53 AT5G48540 receptor-like protein kinase-related family protein -0.74 0.32 -0.29
54 AT2G40460 Major facilitator superfamily protein -0.74 0.31 -0.3
55 AT4G32940 gamma vacuolar processing enzyme gamma vacuolar processing enzyme,
GAMMAVPE		 -0.74 0.31 -0.33
56 AT5G19970 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.74 0.31 -0.32
57 AT1G63260 tetraspanin10 tetraspanin10 0.74 0.32 -0.3
58 AT2G47180 galactinol synthase 1 galactinol synthase 1, galactinol
synthase 1		 -0.74 0.3 -0.31
59 AT1G09390 GDSL-like Lipase/Acylhydrolase superfamily protein 0.74 0.31 -0.33
60 AT3G22370 alternative oxidase 1A alternative oxidase 1A, ATAOX1A,
AtHSR3, hyper-sensitivity-related
3		 -0.73 0.3 -0.33
61 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A -0.73 0.31 -0.32
62 AT4G02340 alpha/beta-Hydrolases superfamily protein -0.73 0.33 -0.32
63 AT5G14120 Major facilitator superfamily protein 0.73 0.29 -0.3
64 AT1G26380 FAD-binding Berberine family protein -0.73 0.31 -0.33
65 AT1G78210 alpha/beta-Hydrolases superfamily protein -0.73 0.33 -0.31
66 AT1G62430 CDP-diacylglycerol synthase 1 CDP-diacylglycerol synthase 1,
CDP-diacylglycerol synthase 1		 -0.73 0.32 -0.32
67 AT5G13160 Protein kinase superfamily protein avrPphB susceptible 1 -0.73 0.29 -0.31
68 AT5G50800 Nodulin MtN3 family protein AtSWEET13, SWEET13 -0.73 0.32 -0.31
69 AT3G49940 LOB domain-containing protein 38 LOB domain-containing protein 38 0.73 0.31 -0.32
70 AT4G22570 adenine phosphoribosyl transferase 3 adenine phosphoribosyl transferase
3		 0.73 0.33 -0.34
71 AT5G40850 urophorphyrin methylase 1 urophorphyrin methylase 1 0.73 0.33 -0.32
72 AT4G03410 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.73 0.31 -0.31
73 AT3G21560 UDP-Glycosyltransferase superfamily protein UGT84A2 -0.72 0.3 -0.32
74 AT1G75040 pathogenesis-related gene 5 PR-5, pathogenesis-related gene 5 -0.72 0.32 -0.33
75 AT1G21560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G01170.1); Has 76 Blast hits
to 76 proteins in 15 species: Archae - 0; Bacteria - 4;
Metazoa - 3; Fungi - 2; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.3 -0.33
76 AT5G49900 Beta-glucosidase, GBA2 type family protein -0.72 0.31 -0.3
77 AT5G07820 Plant calmodulin-binding protein-related 0.72 0.32 -0.31
78 AT3G47550 RING/FYVE/PHD zinc finger superfamily protein -0.72 0.3 -0.3
79 AT1G59710 Protein of unknown function (DUF569) -0.72 0.32 -0.29
80 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 0.72 0.31 -0.32
81 AT1G47710 Serine protease inhibitor (SERPIN) family protein -0.72 0.31 -0.32
82 AT5G59480 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.3 -0.3
83 AT1G25550 myb-like transcription factor family protein 0.72 0.3 -0.29
84 AT1G60960 iron regulated transporter 3 IRON REGULATED TRANSPORTER 3, iron
regulated transporter 3		 0.72 0.33 -0.29
85 AT5G52890 AT hook motif-containing protein 0.71 0.32 -0.3
86 AT4G15420 Ubiquitin fusion degradation UFD1 family protein -0.71 0.31 -0.32
87 AT3G46460 ubiquitin-conjugating enzyme 13 ubiquitin-conjugating enzyme 13 -0.71 0.33 -0.31
88 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.71 0.31 -0.32
89 AT3G50910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits
to 75 proteins in 28 species: Archae - 0; Bacteria - 10;
Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.71 0.31 -0.32
90 AT3G11280 Duplicated homeodomain-like superfamily protein 0.71 0.3 -0.28
91 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 -0.71 0.3 -0.3
92 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.71 0.32 -0.29
93 AT2G37580 RING/U-box superfamily protein -0.71 0.31 -0.31
94 AT1G06790 RNA polymerase Rpb7 N-terminal domain-containing protein 0.71 0.32 -0.31
95 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a -0.71 0.3 -0.33
96 AT1G75370 Sec14p-like phosphatidylinositol transfer family protein -0.71 0.31 -0.29
97 AT5G56100 glycine-rich protein / oleosin 0.71 0.31 -0.28
98 AT5G51970 GroES-like zinc-binding alcohol dehydrogenase family
protein		 0.71 0.33 -0.3
99 AT5G40470 RNI-like superfamily protein 0.71 0.32 -0.32
100 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.71 0.3 -0.31
101 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 -0.71 0.3 -0.35
102 AT2G47730 glutathione S-transferase phi 8 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, Arabidopsis thaliana
glutathione S-transferase phi 8,
GST6, glutathione S-transferase
phi 8		 -0.71 0.32 -0.31
103 AT4G11220 VIRB2-interacting protein 2 VIRB2-interacting protein 2,
Reticulan like protein B2		 -0.71 0.31 -0.34
104 AT3G26020 Protein phosphatase 2A regulatory B subunit family protein -0.71 0.31 -0.32
105 AT5G39850 Ribosomal protein S4 0.71 0.28 -0.32
106 AT1G77760 nitrate reductase 1 GNR1, nitrate reductase 1, NITRATE
REDUCTASE 1		 0.71 0.32 -0.33
107 AT1G16350 Aldolase-type TIM barrel family protein 0.71 0.32 -0.31
108 AT3G13030 hAT transposon superfamily protein 0.71 0.32 -0.31
109 AT4G23630 VIRB2-interacting protein 1 VIRB2-interacting protein 1,
Reticulan like protein B1		 -0.7 0.31 -0.3
110 AT3G57090 Tetratricopeptide repeat (TPR)-like superfamily protein BIGYIN, FISSION 1A -0.7 0.3 -0.31
111 AT2G42530 cold regulated 15b cold regulated 15b -0.7 0.32 -0.33
112 AT1G33970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.31 -0.31
113 AT1G73670 MAP kinase 15 MAP kinase 15, MAP kinase 15 -0.7 0.3 -0.31
114 AT1G10970 zinc transporter 4 precursor ATZIP4, zinc transporter 4
precursor		 0.7 0.3 -0.31
115 AT4G12000 SNARE associated Golgi protein family -0.7 0.34 -0.32
116 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 0.7 0.32 -0.31
117 AT4G22270 Protein of unknown function (DUF3537) ARABIDOPSIS MEMBRANE RELATED
BIGGER1, MEMBRANE RELATED BIGGER1		 -0.7 0.32 -0.34
118 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 -0.7 0.33 -0.33
119 AT3G51240 flavanone 3-hydroxylase F3'H, flavanone 3-hydroxylase,
TRANSPARENT TESTA 6		 -0.7 0.31 -0.3
120 AT4G04900 ROP-interactive CRIB motif-containing protein 10 ROP-interactive CRIB
motif-containing protein 10		 0.7 0.28 -0.3
121 AT3G07390 auxin-responsive family protein Auxin-Induced in Root cultures 12 -0.7 0.31 -0.31
122 AT1G43620 UDP-Glycosyltransferase superfamily protein TRANSPARENT TESTA 15, UGT80B1 -0.7 0.32 -0.3
123 AT1G69640 sphingoid base hydroxylase 1 sphingoid base hydroxylase 1 -0.7 0.33 -0.32
124 AT5G44990 Glutathione S-transferase family protein -0.7 0.3 -0.33
125 AT2G23290 myb domain protein 70 myb domain protein 70, myb domain
protein 70		 0.7 0.31 -0.32
126 AT4G27940 manganese tracking factor for mitochondrial SOD2 ARABIDOPSIS MANGANESE TRACKING
FACTOR FOR MITOCHONDRIAL SOD2,
manganese tracking factor for
mitochondrial SOD2		 -0.7 0.3 -0.33
127 AT4G36010 Pathogenesis-related thaumatin superfamily protein -0.69 0.32 -0.31
128 AT5G18960 FAR1-related sequence 12 FAR1-related sequence 12 0.69 0.3 -0.31
129 AT5G17450 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 21		 -0.69 0.32 -0.33
130 AT3G55740 proline transporter 2 PROLINE TRANSPORTER 2, proline
transporter 2		 -0.69 0.32 -0.32
131 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.32 -0.35
132 AT3G62930 Thioredoxin superfamily protein 0.69 0.31 -0.28
133 AT5G22300 nitrilase 4 NITRILASE 4, nitrilase 4 -0.69 0.31 -0.3
134 AT2G16990 Major facilitator superfamily protein -0.69 0.31 -0.3
135 AT3G62860 alpha/beta-Hydrolases superfamily protein 0.69 0.31 -0.34
136 AT3G27580 Protein kinase superfamily protein ATPK7, D6 PROTEIN KINASE LIKE 3 0.69 0.31 -0.32
137 AT5G27930 Protein phosphatase 2C family protein -0.69 0.3 -0.33
138 AT1G16170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G79660.1); Has 55 Blast hits to 55 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.3 -0.31
139 AT1G31280 Argonaute family protein argonaute 2 -0.69 0.31 -0.32
140 AT1G25230 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.69 0.3 -0.32
141 AT4G34990 myb domain protein 32 myb domain protein 32, myb domain
protein 32		 -0.69 0.31 -0.33
142 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 -0.69 0.3 -0.3
143 AT1G72820 Mitochondrial substrate carrier family protein 0.69 0.32 -0.29
144 AT2G35700 ERF family protein 38 ERF FAMILY PROTEIN 38, ERF family
protein 38		 -0.69 0.31 -0.31
145 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 0.69 0.32 -0.34
146 AT1G64890 Major facilitator superfamily protein -0.69 0.31 -0.32
147 AT1G66410 calmodulin 4 CALMODULIN 4, calmodulin 4 -0.69 0.32 -0.32
148 AT5G27280 Zim17-type zinc finger protein -0.69 0.31 -0.32
149 AT3G52480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; Has 28 Blast
hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.33
150 AT5G15830 basic leucine-zipper 3 basic leucine-zipper 3, basic
leucine-zipper 3		 0.68 0.3 -0.32
151 AT4G39780 Integrase-type DNA-binding superfamily protein 0.68 0.31 -0.3
152 AT3G14770 Nodulin MtN3 family protein AtSWEET2, SWEET2 0.68 0.3 -0.34
153 AT5G53160 regulatory components of ABA receptor 3 PYR1-like 8, regulatory components
of ABA receptor 3		 0.68 0.33 -0.29
154 AT4G25835 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.3 -0.33
155 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 0.67 0.31 -0.3
156 AT2G35820 ureidoglycolate hydrolases 0.67 0.31 -0.32
157 AT1G29980 Protein of unknown function, DUF642 0.67 0.31 -0.3
158 AT3G14240 Subtilase family protein 0.67 0.31 -0.32