AT3G26350 : -
Query Information
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AGICode AT3G26350
Description LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 1 0.31 -0.33
2 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.83 0.32 -0.33
3 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.78 0.34 -0.32
4 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 0.78 0.33 -0.31
5 AT2G23310 Rer1 family protein ATRER1C1 -0.75 0.32 -0.33
6 ATCG01100 NADH dehydrogenase family protein NDHA 0.72 0.33 -0.35
7 ATCG01040 Cytochrome C assembly protein YCF5 0.72 0.29 -0.35
8 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.72 0.31 -0.32
9 ATCG00760 ribosomal protein L36 ribosomal protein L36 0.7 0.32 -0.3
10 AT5G63400 adenylate kinase 1 adenylate kinase 1 -0.7 0.3 -0.31
11 ATCG01090 NADPH dehydrogenases NDHI 0.7 0.31 -0.31
12 AT2G37120 S1FA-like DNA-binding protein -0.69 0.3 -0.3
13 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.69 0.32 -0.32
14 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha 0.69 0.31 -0.33
15 AT2G21490 dehydrin LEA dehydrin LEA 0.69 0.33 -0.32
16 AT3G45420 Concanavalin A-like lectin protein kinase family protein 0.69 0.3 -0.33
17 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 -0.68 0.32 -0.31
18 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 0.68 0.3 -0.32
19 AT2G02660 F-box associated ubiquitination effector family protein -0.68 0.31 -0.33
20 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.68 0.31 -0.31
21 AT1G02360 Chitinase family protein -0.68 0.32 -0.31
22 AT3G32060 transposable element gene -0.68 0.3 -0.33
23 AT3G04780 Protein of unknown function (DUF1000) -0.67 0.3 -0.31
24 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.67 0.33 -0.31
25 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.67 0.31 -0.32
26 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 -0.67 0.32 -0.34
27 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB 0.67 0.3 -0.34
28 AT2G17975 zinc finger (Ran-binding) family protein 0.66 0.32 -0.29
29 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 0.66 0.3 -0.3
30 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD 0.66 0.32 -0.33
31 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.66 0.33 -0.31
32 AT1G23830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.3 -0.32
33 AT3G17290 transposable element gene 0.65 0.32 -0.32
34 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 0.65 0.33 -0.31
35 AT1G53090 SPA1-related 4 SPA1-related 4 0.65 0.3 -0.31
36 AT3G05150 Major facilitator superfamily protein -0.65 0.29 -0.3
37 AT4G14695 Uncharacterised protein family (UPF0041) -0.65 0.34 -0.32
38 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 -0.65 0.3 -0.3
39 AT5G20840 Phosphoinositide phosphatase family protein 0.65 0.3 -0.31
40 AT2G30050 transducin family protein / WD-40 repeat family protein -0.65 0.31 -0.31
41 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.65 0.32 -0.31
42 AT4G33870 Peroxidase superfamily protein 0.65 0.32 -0.33
43 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.32
44 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.64 0.32 -0.32
45 AT3G12030 Protein of unknown function DUF106, transmembrane -0.64 0.33 -0.3
46 AT5G39390 Leucine-rich repeat protein kinase family protein -0.64 0.31 -0.3
47 AT1G05720 selenoprotein family protein -0.64 0.31 -0.33
48 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 0.64 0.3 -0.31
49 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.3 -0.3
50 AT1G61500 S-locus lectin protein kinase family protein 0.63 0.3 -0.32
51 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.63 0.29 -0.3
52 AT3G59920 RAB GDP dissociation inhibitor 2 RAB GDP dissociation inhibitor 2,
RAB GDP dissociation inhibitor 2		 -0.63 0.33 -0.31
53 AT5G57500 Galactosyltransferase family protein -0.63 0.32 -0.33
54 AT2G43600 Chitinase family protein -0.63 0.29 -0.31
55 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.63 0.3 -0.31
56 ATCG00590 electron carriers ORF31 0.63 0.32 -0.32
57 ATCG01120 chloroplast ribosomal protein S15 chloroplast ribosomal protein S15 0.63 0.29 -0.31
58 AT1G42250 transposable element gene 0.63 0.32 -0.31
59 AT3G48370 transposable element gene -0.62 0.31 -0.29
60 AT3G14710 RNI-like superfamily protein 0.62 0.31 -0.31
61 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.62 0.35 -0.32
62 AT4G34040 RING/U-box superfamily protein 0.62 0.3 -0.31
63 AT5G22720 F-box/RNI-like superfamily protein 0.62 0.3 -0.35
64 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 0.62 0.32 -0.3
65 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.62 0.32 -0.32
66 AT1G71940 SNARE associated Golgi protein family -0.62 0.31 -0.32
67 ATCG00040 maturase K maturase K 0.62 0.31 -0.33
68 AT2G43880 Pectin lyase-like superfamily protein -0.61 0.29 -0.32
69 AT4G16160 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-2, ATOEP16-S 0.61 0.29 -0.32
70 AT1G49240 actin 8 actin 8, FRIZZY AND KINKED SHOOTS -0.61 0.31 -0.32
71 AT5G07050 nodulin MtN21 /EamA-like transporter family protein 0.61 0.31 -0.31
72 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.61 0.29 -0.28
73 AT2G45620 Nucleotidyltransferase family protein 0.61 0.31 -0.32
74 AT3G19770 Vacuolar sorting protein 9 (VPS9) domain ARABIDOPSIS THALIANA VACUOLAR
PROTEIN SORTING 9A, VPS9, VPS9A		 -0.61 0.32 -0.31
75 ATCG00600 PETG PETG 0.61 0.31 -0.32
76 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.3 -0.33
77 AT1G43970 unknown protein; Has 10 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.31
78 AT1G74840 Homeodomain-like superfamily protein -0.61 0.33 -0.34
79 AT3G05530 regulatory particle triple-A ATPase 5A ATS6A.2, regulatory particle
triple-A ATPase 5A		 -0.61 0.32 -0.29
80 AT4G22320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits
to 5363 proteins in 542 species: Archae - 33; Bacteria -
806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses -
151; Other Eukaryotes - 4399 (source: NCBI BLink).		 -0.61 0.32 -0.32
81 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF 0.6 0.31 -0.31
82 AT2G36320 A20/AN1-like zinc finger family protein -0.6 0.31 -0.32
83 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 0.6 0.33 -0.33
84 AT5G18110 novel cap-binding protein novel cap-binding protein -0.6 0.33 -0.3
85 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 0.6 0.33 -0.3
86 AT4G31320 SAUR-like auxin-responsive protein family -0.6 0.3 -0.32
87 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.6 0.31 -0.29
88 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 -0.6 0.31 -0.31
89 AT5G15900 TRICHOME BIREFRINGENCE-LIKE 19 TRICHOME BIREFRINGENCE-LIKE 19 -0.59 0.32 -0.35
90 AT3G08910 DNAJ heat shock family protein -0.59 0.33 -0.32
91 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.59 0.32 -0.29
92 AT5G67430 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.59 0.34 -0.33
93 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.31
94 ATCG00510 photsystem I subunit I photsystem I subunit I 0.59 0.32 -0.3
95 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.59 0.32 -0.28
96 AT5G07040 RING/U-box superfamily protein -0.59 0.3 -0.29
97 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.59 0.31 -0.32
98 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 -0.59 0.32 -0.31
99 AT2G18590 Major facilitator superfamily protein 0.59 0.29 -0.33
100 AT1G52070 Mannose-binding lectin superfamily protein -0.58 0.33 -0.33
101 AT1G68920 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.31 -0.33
102 AT5G57230 Thioredoxin superfamily protein -0.58 0.33 -0.29
103 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.58 0.34 -0.31
104 AT4G22250 RING/U-box superfamily protein -0.58 0.32 -0.31
105 AT2G32120 heat-shock protein 70T-2 heat-shock protein 70T-2 0.58 0.33 -0.32
106 AT2G19660 Cysteine/Histidine-rich C1 domain family protein -0.58 0.31 -0.31
107 AT5G59000 RING/FYVE/PHD zinc finger superfamily protein 0.58 0.31 -0.31
108 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.33 -0.32
109 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.3 -0.35
110 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 0.58 0.3 -0.31
111 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.58 0.32 -0.31
112 ATMG00470 hypothetical protein ORF122A 0.57 0.31 -0.31
113 AT2G29130 laccase 2 ATLAC2, laccase 2 0.57 0.33 -0.31
114 AT1G75360 unknown protein; Has 74 Blast hits to 71 proteins in 15
species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).		 0.57 0.32 -0.33
115 AT2G30630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.31 -0.32
116 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.32 -0.33
117 AT3G62560 Ras-related small GTP-binding family protein -0.57 0.32 -0.33
118 AT1G52990 thioredoxin family protein 0.57 0.32 -0.33
119 AT1G21050 Protein of unknown function, DUF617 -0.57 0.32 -0.33
120 AT3G17090 Protein phosphatase 2C family protein -0.57 0.31 -0.33
121 AT1G71070 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.56 0.31 -0.31
122 AT4G19185 nodulin MtN21 /EamA-like transporter family protein -0.56 0.3 -0.29
123 AT2G20780 Major facilitator superfamily protein -0.56 0.3 -0.29
124 AT1G28160 Integrase-type DNA-binding superfamily protein -0.56 0.32 -0.33
125 AT3G20950 cytochrome P450, family 705, subfamily A, polypeptide 32 cytochrome P450, family 705,
subfamily A, polypeptide 32		 -0.56 0.3 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		-0.79 0.48 -0.44 C0228
127 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		0.75 0.46 -0.47 C0105
128 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.72 0.45 -0.46 C0136
129 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.68 0.44 -0.47 C0131