AT3G20710 : -
Query Information
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AGICode AT3G20710
Description F-box family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G20710 F-box family protein 1 0.3 -0.32
2 AT2G35000 RING/U-box superfamily protein Arabidopsis toxicos en levadura 9 0.75 0.32 -0.31
3 AT5G26260 TRAF-like family protein 0.72 0.31 -0.32
4 AT2G34140 Dof-type zinc finger DNA-binding family protein 0.71 0.31 -0.31
5 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 0.71 0.32 -0.31
6 AT2G26290 root-specific kinase 1 root-specific kinase 1 0.7 0.32 -0.31
7 AT5G59090 subtilase 4.12 subtilase 4.12, subtilase 4.12 0.69 0.29 -0.33
8 AT2G21850 Cysteine/Histidine-rich C1 domain family protein 0.68 0.32 -0.32
9 AT4G30170 Peroxidase family protein 0.68 0.31 -0.33
10 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha -0.67 0.33 -0.31
11 ATCG00720 photosynthetic electron transfer B photosynthetic electron transfer B -0.66 0.3 -0.33
12 AT3G29760 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.66 0.32 -0.31
13 AT2G45220 Plant invertase/pectin methylesterase inhibitor superfamily 0.65 0.32 -0.31
14 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 -0.65 0.31 -0.32
15 AT3G12030 Protein of unknown function DUF106, transmembrane 0.65 0.31 -0.33
16 AT5G60530 late embryogenesis abundant protein-related / LEA
protein-related		 0.65 0.3 -0.31
17 AT4G26220 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.65 0.3 -0.29
18 AT2G04680 Cysteine/Histidine-rich C1 domain family protein 0.64 0.32 -0.32
19 AT2G18760 chromatin remodeling 8 chromatin remodeling 8 -0.64 0.32 -0.29
20 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB -0.64 0.3 -0.31
21 ATCG01040 Cytochrome C assembly protein YCF5 -0.63 0.32 -0.3
22 AT2G45210 SAUR-like auxin-responsive protein family 0.63 0.31 -0.31
23 AT1G31050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.63 0.3 -0.3
24 AT4G13660 pinoresinol reductase 2 ATPRR2, pinoresinol reductase 2 0.63 0.31 -0.32
25 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.62 0.32 -0.33
26 AT2G42350 RING/U-box superfamily protein 0.62 0.32 -0.3
27 AT4G18820 AAA-type ATPase family protein -0.62 0.32 -0.31
28 ATCG01100 NADH dehydrogenase family protein NDHA -0.61 0.31 -0.3
29 AT1G73340 Cytochrome P450 superfamily protein 0.61 0.33 -0.33
30 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 -0.61 0.32 -0.32
31 AT5G58550 ETO1-like 2 ETO1-like 2 -0.61 0.3 -0.3
32 ATCG00520 unfolded protein binding YCF4 -0.6 0.32 -0.31
33 AT3G19390 Granulin repeat cysteine protease family protein 0.6 0.31 -0.3
34 AT3G20370 TRAF-like family protein 0.59 0.32 -0.28
35 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.59 0.33 -0.33
36 ATCG00160 ribosomal protein S2 ribosomal protein S2 -0.59 0.31 -0.3
37 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 0.59 0.33 -0.33
38 AT3G02240 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 7 0.59 0.33 -0.3
39 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.59 0.3 -0.31
40 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.59 0.31 -0.32
41 AT5G02670 BEST Arabidopsis thaliana protein match is: poly(A)
polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.34 -0.31
42 AT4G13130 Cysteine/Histidine-rich C1 domain family protein 0.59 0.31 -0.3
43 AT1G23720 Proline-rich extensin-like family protein 0.59 0.32 -0.31
44 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 -0.59 0.31 -0.31
45 AT1G48690 Auxin-responsive GH3 family protein 0.58 0.33 -0.31
46 AT2G32640 Lycopene beta/epsilon cyclase protein -0.58 0.33 -0.3
47 AT2G29650 phosphate transporter 4;1 anion transporter 1, phosphate
transporter 4;1		 -0.58 0.28 -0.31
48 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 0.58 0.3 -0.3
49 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A -0.58 0.31 -0.31
50 AT3G06300 P4H isoform 2 P4H isoform 2, prolyl
4-hydroxylase 2		 0.58 0.3 -0.3
51 AT5G48000 cytochrome P450, family 708, subfamily A, polypeptide 2 CYTOCHROME P450, FAMILY 708,
SUBFAMILY A, POLYPEPTIDE 2,
cytochrome P450, family 708,
subfamily A, polypeptide 2,
THALIANOL HYDROXYLASE, THALIANOL
HYDROXYLASE 1		 0.57 0.31 -0.31
52 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 0.57 0.32 -0.33
53 AT2G36810 ARM repeat superfamily protein -0.57 0.29 -0.35
54 AT1G77640 Integrase-type DNA-binding superfamily protein 0.57 0.3 -0.34
55 AT4G11650 osmotin 34 osmotin 34, osmotin 34 0.57 0.32 -0.29
56 AT2G15530 RING/U-box superfamily protein -0.57 0.32 -0.33
57 AT1G21700 SWITCH/sucrose nonfermenting 3C SWITCH/sucrose nonfermenting 3C,
CHB4, SWITCH/sucrose nonfermenting
3C		 -0.57 0.32 -0.31
58 ATCG01090 NADPH dehydrogenases NDHI -0.57 0.32 -0.33
59 AT3G09290 telomerase activator1 telomerase activator1 0.56 0.3 -0.31
60 AT3G29250 NAD(P)-binding Rossmann-fold superfamily protein AtSDR4, short-chain dehydrogenase
reductase 4		 0.56 0.32 -0.33
61 AT3G45750 Nucleotidyltransferase family protein -0.56 0.3 -0.33
62 AT1G36060 Integrase-type DNA-binding superfamily protein 0.56 0.31 -0.33
63 AT3G01460 methyl-CPG-binding domain 9 ATMBD9, methyl-CPG-binding domain
9		 -0.56 0.3 -0.31
64 AT5G10580 Protein of unknown function, DUF599 0.56 0.29 -0.32
65 AT1G60680 NAD(P)-linked oxidoreductase superfamily protein 0.56 0.31 -0.34
66 AT3G51150 ATP binding microtubule motor family protein -0.56 0.32 -0.31
67 AT2G30950 FtsH extracellular protease family FTSH2, VARIEGATED 2 -0.56 0.33 -0.33
68 AT5G58870 FTSH protease 9 FTSH protease 9 -0.56 0.31 -0.31
69 ATCG00750 ribosomal protein S11 ribosomal protein S11 -0.56 0.34 -0.3
70 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD -0.56 0.32 -0.34
71 AT5G66940 Dof-type zinc finger DNA-binding family protein -0.56 0.3 -0.3
72 AT1G05280 Protein of unknown function (DUF604) 0.55 0.31 -0.33
73 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 0.55 0.32 -0.3
74 AT4G22250 RING/U-box superfamily protein 0.55 0.29 -0.31
75 AT2G03770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.55 0.3 -0.31
76 AT1G77740 phosphatidylinositol-4-phosphate 5-kinase 2 phosphatidylinositol-4-phosphate
5-kinase 2		 -0.55 0.31 -0.33
77 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.33 -0.35
78 AT3G54500 BEST Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183
Blast hits to 175 proteins in 44 species: Archae - 0;
Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).		 -0.54 0.29 -0.31
79 AT5G38700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible, LP.12 twelve leaves visible; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.32 -0.33
80 AT1G19190 alpha/beta-Hydrolases superfamily protein 0.54 0.32 -0.31
81 AT3G11000 DCD (Development and Cell Death) domain protein -0.54 0.31 -0.31
82 ATCG00440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
protein		 NDHC -0.54 0.31 -0.31
83 ATCG01070 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDHE -0.54 0.29 -0.32
84 AT1G50840 polymerase gamma 2 polymerase gamma 2, polymerase I A -0.54 0.29 -0.33
85 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.53 0.31 -0.31
86 AT2G20400 myb-like HTH transcriptional regulator family protein -0.53 0.3 -0.33
87 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 0.53 0.3 -0.33
88 AT1G75210 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase -0.53 0.3 -0.31
89 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 -0.52 0.3 -0.33
90 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 -0.52 0.32 -0.33
91 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 -0.52 0.29 -0.3
92 AT1G60450 galactinol synthase 7 galactinol synthase 7, galactinol
synthase 7		 -0.52 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.69 0.47 -0.41 C0035
94 C0121 Isoheptylglucosinolate - - - 0.68 0.42 -0.43
95 C0184 MST_3110.4 - - - -0.67 0.49 -0.43
96 C0185 MST_3139.9 - - - 0.61 0.43 -0.43
97 C0025 2-Hydroxy-3-butenylglucosinolate (R),(S)-2-Hydroxy-3-butenylglucosinolate 2-hydroxy-3-butenylglucosinolate glucosinolate biosynthesis from dihomomethionine 0.61 0.43 -0.44 C0025