AGICode | AT3G24760 |
Description | Galactose oxidase/kelch repeat superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G24760 | Galactose oxidase/kelch repeat superfamily protein | 1 | 0.31 | -0.31 | |||
2 | AT3G17700 | cyclic nucleotide-binding transporter 1 | CYCLIC NUCLEOTIDE-GATED CHANNEL 20, cyclic nucleotide-binding transporter 1, CNGC20 |
0.71 | 0.34 | -0.31 | ||
3 | AT5G44320 | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) |
-0.71 | 0.32 | -0.32 | |||
4 | AT1G09780 | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent |
2,3-biphosphoglycerate-independent phosphoglycerate mutase 1 |
-0.71 | 0.34 | -0.31 | ||
5 | AT3G13920 | eukaryotic translation initiation factor 4A1 | eukaryotic translation initiation factor 4A1, RH4, TIF4A1 |
-0.71 | 0.33 | -0.28 | ||
6 | AT1G14210 | Ribonuclease T2 family protein | -0.71 | 0.32 | -0.33 | |||
7 | AT1G56650 | production of anthocyanin pigment 1 | MYB DOMAIN PROTEIN 75, MYELOBLASTOSIS PROTEIN 75, production of anthocyanin pigment 1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 |
0.7 | 0.32 | -0.3 | ||
8 | AT4G24450 | phosphoglucan, water dikinase | ATGWD2, GWD3, phosphoglucan, water dikinase |
0.69 | 0.31 | -0.31 | ||
9 | AT1G11680 | CYTOCHROME P450 51G1 | CYTOCHROME P450 51, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1, embryo defective 1738 |
-0.69 | 0.33 | -0.3 | ||
10 | AT3G26580 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.69 | 0.3 | -0.31 | |||
11 | AT4G20840 | FAD-binding Berberine family protein | -0.69 | 0.31 | -0.32 | |||
12 | AT5G56950 | nucleosome assembly protein 1;3 | nucleosome assembly protein 1;3, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 03, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A3 |
-0.69 | 0.32 | -0.32 | ||
13 | AT5G47550 | Cystatin/monellin superfamily protein | -0.69 | 0.33 | -0.34 | |||
14 | AT1G24530 | Transducin/WD40 repeat-like superfamily protein | -0.69 | 0.31 | -0.29 | |||
15 | AT4G14090 | UDP-Glycosyltransferase superfamily protein | 0.68 | 0.31 | -0.31 | |||
16 | AT5G42800 | dihydroflavonol 4-reductase | dihydroflavonol 4-reductase, M318, TT3 |
0.68 | 0.29 | -0.33 | ||
17 | AT4G04750 | Major facilitator superfamily protein | 0.67 | 0.31 | -0.33 | |||
18 | AT5G66410 | phosducin-like protein 3 homolog | phosducin-like protein 3 homolog | -0.67 | 0.31 | -0.32 | ||
19 | AT1G62430 | CDP-diacylglycerol synthase 1 | CDP-diacylglycerol synthase 1, CDP-diacylglycerol synthase 1 |
0.67 | 0.31 | -0.34 | ||
20 | AT1G65930 | cytosolic NADP+-dependent isocitrate dehydrogenase | cytosolic NADP+-dependent isocitrate dehydrogenase |
-0.67 | 0.32 | -0.33 | ||
21 | AT1G55810 | uridine kinase-like 3 | uridine kinase-like 3 | -0.67 | 0.3 | -0.33 | ||
22 | AT5G02620 | ankyrin-like1 | ankyrin-like1, ATANK1 | 0.67 | 0.33 | -0.3 | ||
23 | AT1G19360 | Nucleotide-diphospho-sugar transferase family protein | reduced residual arabinose 3 | -0.66 | 0.32 | -0.32 | ||
24 | AT2G17670 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.66 | 0.32 | -0.34 | |||
25 | AT2G20340 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
0.66 | 0.3 | -0.3 | |||
26 | AT5G62000 | auxin response factor 2 | ARF1-BINDING PROTEIN, auxin response factor 2, HLS1 SUPPRESSOR, ORESARA 14 |
0.66 | 0.32 | -0.33 | ||
27 | AT3G23610 | dual specificity protein phosphatase 1 | dual specificity protein phosphatase 1 |
0.66 | 0.31 | -0.3 | ||
28 | AT2G43140 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.65 | 0.31 | -0.29 | |||
29 | AT3G10940 | dual specificity protein phosphatase (DsPTP1) family protein |
LIKE SEX4 2 | 0.65 | 0.32 | -0.32 | ||
30 | AT1G71400 | receptor like protein 12 | receptor like protein 12, receptor like protein 12 |
-0.65 | 0.32 | -0.33 | ||
31 | AT5G54060 | UDP-glucose:flavonoid 3-o-glucosyltransferase | UDP-glucose:flavonoid 3-o-glucosyltransferase |
0.65 | 0.33 | -0.29 | ||
32 | AT2G21340 | MATE efflux family protein | 0.65 | 0.31 | -0.31 | |||
33 | AT1G36060 | Integrase-type DNA-binding superfamily protein | -0.65 | 0.32 | -0.32 | |||
34 | AT5G55140 | ribosomal protein L30 family protein | -0.65 | 0.3 | -0.32 | |||
35 | AT5G58660 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.65 | 0.31 | -0.34 | |||
36 | AT3G14230 | related to AP2 2 | related to AP2 2 | -0.65 | 0.32 | -0.3 | ||
37 | AT5G62600 | ARM repeat superfamily protein | modifier of snc1-1, 14 | -0.65 | 0.35 | -0.33 | ||
38 | AT4G15680 | Thioredoxin superfamily protein | -0.65 | 0.32 | -0.28 | |||
39 | AT2G28660 | Chloroplast-targeted copper chaperone protein | -0.65 | 0.3 | -0.33 | |||
40 | AT4G26720 | protein phosphatase X 1 | PROTEIN PHOSPHATASE X-1, protein phosphatase X 1 |
-0.65 | 0.32 | -0.29 | ||
41 | AT5G17220 | glutathione S-transferase phi 12 | ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GLUTATHIONE S-TRANSFERASE 26, glutathione S-transferase phi 12, TRANSPARENT TESTA 19 |
0.65 | 0.3 | -0.32 | ||
42 | AT1G78130 | Major facilitator superfamily protein | unfertilized embryo sac 2 | 0.65 | 0.31 | -0.31 | ||
43 | AT1G70190 | Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like |
-0.64 | 0.31 | -0.3 | |||
44 | AT5G05450 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.64 | 0.3 | -0.32 | |||
45 | AT3G15640 | Rubredoxin-like superfamily protein | -0.64 | 0.32 | -0.29 | |||
46 | AT5G65480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.33 | -0.31 | |||
47 | AT4G15690 | Thioredoxin superfamily protein | -0.64 | 0.3 | -0.32 | |||
48 | AT5G43520 | Cysteine/Histidine-rich C1 domain family protein | -0.64 | 0.31 | -0.31 | |||
49 | AT4G32390 | Nucleotide-sugar transporter family protein | -0.64 | 0.32 | -0.28 | |||
50 | AT5G26570 | catalytics;carbohydrate kinases;phosphoglucan, water dikinases |
ATGWD3, OK1, PHOSPHOGLUCAN WATER DIKINASE |
0.64 | 0.29 | -0.32 | ||
51 | AT2G27330 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.64 | 0.32 | -0.33 | |||
52 | AT1G27340 | Galactose oxidase/kelch repeat superfamily protein | -0.63 | 0.33 | -0.32 | |||
53 | AT5G60980 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain |
-0.63 | 0.3 | -0.29 | |||
54 | AT1G01100 | 60S acidic ribosomal protein family | -0.63 | 0.3 | -0.3 | |||
55 | AT4G00390 | DNA-binding storekeeper protein-related transcriptional regulator |
-0.63 | 0.32 | -0.31 | |||
56 | AT1G22570 | Major facilitator superfamily protein | -0.63 | 0.31 | -0.33 | |||
57 | AT4G27730 | oligopeptide transporter 1 | ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 6, oligopeptide transporter 1 |
-0.62 | 0.33 | -0.32 | ||
58 | AT3G60190 | DYNAMIN-like 1E | DYNAMIN-like 1E, ARABIDOPSIS DYNAMIN-LIKE 4, DYNAMIN-LIKE PROTEIN 2, DYNAMIN-like 1E, DYNAMIN-RELATED PROTEIN 1E, ENHANCED DISEASE RESISTANCE 3 |
0.62 | 0.34 | -0.33 | ||
59 | AT1G71430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.62 | 0.31 | -0.29 | |||
60 | AT4G08980 | F-BOX WITH WD-40 2 | F-BOX WITH WD-40 2 | 0.62 | 0.31 | -0.31 | ||
61 | AT1G10590 | Nucleic acid-binding, OB-fold-like protein | -0.62 | 0.31 | -0.32 | |||
62 | AT3G52950 | CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein |
-0.62 | 0.32 | -0.31 | |||
63 | AT3G25190 | Vacuolar iron transporter (VIT) family protein | -0.62 | 0.3 | -0.32 | |||
64 | AT2G23430 | Cyclin-dependent kinase inhibitor family protein | ICK1, KIP-RELATED PROTEIN 1 | 0.62 | 0.32 | -0.3 | ||
65 | AT4G04990 | Protein of unknown function (DUF761) | 0.62 | 0.32 | -0.32 | |||
66 | AT5G44450 | methyltransferases | -0.62 | 0.34 | -0.29 | |||
67 | AT3G29590 | HXXXD-type acyl-transferase family protein | AT5MAT | 0.62 | 0.31 | -0.34 | ||
68 | AT5G62850 | Nodulin MtN3 family protein | AtSWEET5, VEGETATIVE CELL EXPRESSED1, SWEET5 |
0.62 | 0.32 | -0.3 | ||
69 | AT4G13940 | S-adenosyl-L-homocysteine hydrolase | S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1, EMBRYO DEFECTIVE 1395, HOMOLOGY-DEPENDENT GENE SILENCING 1, MATERNAL EFFECT EMBRYO ARREST 58, S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1 |
-0.61 | 0.29 | -0.33 | ||
70 | AT4G11240 | Calcineurin-like metallo-phosphoesterase superfamily protein |
TOPP7 | -0.61 | 0.32 | -0.32 | ||
71 | AT3G22320 | Eukaryotic rpb5 RNA polymerase subunit family protein | ATRPABC24.3, NRPB5, NRPD5, RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A |
-0.61 | 0.32 | -0.31 | ||
72 | AT2G32070 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.61 | 0.31 | -0.31 | |||
73 | AT2G42950 | Magnesium transporter CorA-like family protein | 0.61 | 0.32 | -0.29 | |||
74 | AT1G79380 | Ca(2)-dependent phospholipid-binding protein (Copine) family |
0.6 | 0.3 | -0.32 | |||
75 | AT1G78790 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.31 | -0.31 | |||
76 | AT1G30160 | Protein of unknown function (DUF295) | 0.6 | 0.33 | -0.3 | |||
77 | AT2G19780 | Leucine-rich repeat (LRR) family protein | 0.6 | 0.33 | -0.31 | |||
78 | AT1G19630 | cytochrome P450, family 722, subfamily A, polypeptide 1 | cytochrome P450, family 722, subfamily A, polypeptide 1 |
0.6 | 0.31 | -0.3 | ||
79 | AT2G25850 | poly(A) polymerase 2 | poly(A) polymerase 2 | 0.6 | 0.35 | -0.33 | ||
80 | AT3G52180 | dual specificity protein phosphatase (DsPTP1) family protein |
ATPTPKIS1, ATSEX4, DUAL-SPECIFICITY PROTEIN PHOSPHATASE 4, STARCH-EXCESS 4 |
0.6 | 0.32 | -0.31 | ||
81 | AT4G39190 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits to 3562 proteins in 401 species: Archae - 12; Bacteria - 497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses - 22; Other Eukaryotes - 3119 (source: NCBI BLink). |
0.6 | 0.33 | -0.32 | |||
82 | AT4G31820 | Phototropic-responsive NPH3 family protein | ENHANCER OF PINOID, MACCHI-BOU 4, NAKED PINS IN YUC MUTANTS 1 |
0.59 | 0.34 | -0.32 | ||
83 | AT5G22600 | FBD / Leucine Rich Repeat domains containing protein | 0.59 | 0.32 | -0.32 | |||
84 | AT5G22760 | PHD finger family protein | 0.59 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
85 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
0.79 | 0.46 | -0.45 | ||
86 | C0071 | Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside | - | - | - | 0.78 | 0.45 | -0.48 | ||
87 | C0072 | Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside | - | - | - | 0.77 | 0.46 | -0.44 | ||
88 | C0003 | α-Tocopherol | - | alpha-Tocopherol | vitamin E biosynthesis | 0.76 | 0.45 | -0.47 | ||
89 | C0176 | MST_2406.9 | - | - | - | 0.75 | 0.46 | -0.46 | ||
90 | C0109 | Guanine | - | Guanine | guanine and guanosine salvage II, guanosine nucleotides degradation II |
0.75 | 0.44 | -0.47 | ||
91 | C0010 | myo-Inositol-1-phosphate | D,L-myo-Inositol-1-phosphate | 1D-myo-Inositol (3)-phosphate | myo-inositol biosynthesis, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) |
0.74 | 0.46 | -0.44 | ||
92 | C0210 | Phytol | E-Phytol | Phytol | chlorophyll a degradation II, chlorophyll a degradation, phytol salvage pathway |
0.74 | 0.45 | -0.47 | ||
93 | C0169 | MST_2105.7 | - | - | - | 0.73 | 0.44 | -0.46 | ||
94 | C0031 | 3-Methylthio-n-propylglucosinolate | - | 3-Methylthiopropylglucosinolate | glucosinolate biosynthesis from homomethionine | -0.69 | 0.43 | -0.42 | ||
95 | C0180 | MST_2539.9 | - | - | - | 0.69 | 0.46 | -0.45 |