AT3G13840 : -
Query Information
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AGICode AT3G13840
Description GRAS family transcription factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13840 GRAS family transcription factor 1 0.33 -0.3
2 AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.32
3 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.68 0.31 -0.31
4 AT2G20650 RING/U-box superfamily protein 0.66 0.33 -0.3
5 AT1G51300 alpha/beta-Hydrolases superfamily protein 0.66 0.32 -0.34
6 AT4G00760 pseudo-response regulator 8 pseudo-response regulator 8,
PSEUDO-RESPONSE REGULATOR 8		 0.65 0.32 -0.31
7 AT5G36090 transposable element gene -0.65 0.3 -0.33
8 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.64 0.31 -0.33
9 AT2G38300 myb-like HTH transcriptional regulator family protein 0.63 0.3 -0.29
10 AT4G35170 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.62 0.31 -0.33
11 AT4G02490 transposable element gene -0.61 0.33 -0.3
12 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 0.61 0.3 -0.33
13 AT5G28620 protein kinase C-related -0.61 0.3 -0.31
14 AT3G61690 nucleotidyltransferases 0.59 0.32 -0.31
15 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein 0.59 0.34 -0.33
16 AT2G29100 glutamate receptor 2.9 glutamate receptor 2.9, GLUTAMATE
RECEPTOR 2.9, glutamate receptor
2.9		 -0.59 0.31 -0.3
17 AT5G61320 cytochrome P450, family 89, subfamily A, polypeptide 3 cytochrome P450, family 89,
subfamily A, polypeptide 3		 -0.59 0.32 -0.33
18 AT5G26880 AGAMOUS-like 26 AGAMOUS-like 26 0.59 0.3 -0.29
19 AT3G53690 RING/U-box superfamily protein -0.58 0.3 -0.32
20 AT1G64490 DEK, chromatin associated protein -0.58 0.31 -0.29
21 AT1G58330 transcription factor-related ZW2 -0.58 0.34 -0.34
22 AT1G54370 sodium hydrogen exchanger 5 NA+/H+ ANTIPORTER 5, sodium
hydrogen exchanger 5		 0.58 0.33 -0.31
23 AT3G61160 Protein kinase superfamily protein 0.57 0.32 -0.33
24 AT5G27020 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.3 -0.31
25 AT1G48640 Transmembrane amino acid transporter family protein -0.55 0.3 -0.32
26 AT4G26620 Sucrase/ferredoxin-like family protein -0.55 0.31 -0.34
27 AT5G28420 Pentatricopeptide repeat (PPR) superfamily protein -0.55 0.3 -0.3
28 AT5G59120 subtilase 4.13 subtilase 4.13, subtilase 4.13 -0.55 0.32 -0.31
29 AT5G25950 Protein of Unknown Function (DUF239) 0.54 0.31 -0.32
30 AT1G09155 phloem protein 2-B15 phloem protein 2-B15, phloem
protein 2-B15		 -0.54 0.31 -0.31
31 AT1G68420 Class II aaRS and biotin synthetases superfamily protein 0.54 0.33 -0.32
32 AT3G54230 suppressor of abi3-5 suppressor of abi3-5 0.54 0.31 -0.33
33 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 0.54 0.29 -0.31
34 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein -0.54 0.31 -0.31
35 AT5G34830 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.31 -0.31
36 AT1G23600 Domain of unknown function DUF220 -0.53 0.31 -0.31
37 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.32 -0.31
38 AT4G33970 Leucine-rich repeat (LRR) family protein 0.53 0.3 -0.32
39 AT1G14970 O-fucosyltransferase family protein 0.53 0.32 -0.32
40 AT2G33690 Late embryogenesis abundant protein, group 6 0.53 0.33 -0.31
41 AT5G19490 Histone superfamily protein -0.53 0.33 -0.32
42 AT2G35585 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits
to 67 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.32 -0.29
43 AT2G34230 Protein with domains of unknown function (DUF627 and
DUF629)		 0.52 0.33 -0.3
44 AT1G62340 PA-domain containing subtilase family protein ABNORMAL LEAF-SHAPE, ABNORMAL
LEAF-SHAPE 1		 -0.52 0.3 -0.31
45 AT2G13970 transposable element gene 0.52 0.32 -0.3
46 AT5G43790 Pentatricopeptide repeat (PPR) superfamily protein 0.52 0.3 -0.33
47 AT2G04710 transposable element gene 0.52 0.34 -0.31
48 AT2G41930 Protein kinase superfamily protein -0.52 0.31 -0.31
49 AT5G65560 Pentatricopeptide repeat (PPR) superfamily protein 0.51 0.3 -0.32
50 AT5G25880 NADP-malic enzyme 3 Arabidopsis thaliana NADP-malic
enzyme 3, NADP-malic enzyme 3		 -0.51 0.33 -0.31
51 AT4G32730 Homeodomain-like protein ATMYB3R-1, ARABIDOOSIS THALIANA
MYB DOMAIN PROTEIN 3R1, MYB DOMAIN
PROTEIN 3R1, C-MYB-LIKE
TRANSCRIPTION FACTOR 3R-1, PC-MYB1		 0.51 0.32 -0.32
52 AT1G09410 pentatricopeptide (PPR) repeat-containing protein -0.51 0.33 -0.3
53 AT2G09910 transposable element gene -0.51 0.35 -0.32
54 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 0.51 0.34 -0.31
55 AT5G05750 DNAJ heat shock N-terminal domain-containing protein -0.5 0.33 -0.32
56 AT1G74320 Protein kinase superfamily protein -0.5 0.3 -0.32
57 AT5G51630 Disease resistance protein (TIR-NBS-LRR class) family 0.5 0.32 -0.33
58 AT3G22180 DHHC-type zinc finger family protein -0.5 0.31 -0.34
59 AT4G23840 Leucine-rich repeat (LRR) family protein 0.5 0.32 -0.31
60 AT2G20430 ROP-interactive CRIB motif-containing protein 6 ROP-interactive CRIB
motif-containing protein 6		 0.5 0.3 -0.34
61 AT5G39340 histidine-containing phosphotransmitter 3 histidine-containing
phosphotransmitter 3, ARABIDOPSIS
THALIANA HISTIDINE-CONTAINING
PHOSPHOTRANSMITTER 2		 -0.49 0.31 -0.3
62 AT1G47885 Ribonuclease inhibitor 0.49 0.31 -0.31
63 AT3G13630 unknown protein; Has 21 Blast hits to 21 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.49 0.32 -0.32
64 AT1G67635 BEST Arabidopsis thaliana protein match is:
phosphatidylinositol 3- and 4-kinase family protein
(TAIR:AT1G27570.1); Has 50 Blast hits to 50 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.31 -0.3
65 AT1G15360 Integrase-type DNA-binding superfamily protein SHINE 1, WAX INDUCER 1 -0.48 0.32 -0.29
66 AT1G13150 cytochrome P450, family 86, subfamily C, polypeptide 4 cytochrome P450, family 86,
subfamily C, polypeptide 4		 -0.48 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.64 0.45 -0.44
68 C0224 Quercetin-3-O-[6''-O-(α-rhamnosyl)β-glucoside]-7-O-α-rhamnoside Quercetin-3-O-[6''-O-(α-L-rhamnosyl)β-D-glucoside]-7-O-α-L-rhamnoside Quercetin 3-O-[6''-O-rhamnosyl)glucoside] 7-O-rhamnoside quercetin glucoside biosynthesis (Arabidopsis) -0.48 0.32 -0.3