AT3G13235 : DNA-damage inducible 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G13235
Description ubiquitin family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13235 ubiquitin family protein DNA-damage inducible 1 1 0.31 -0.31
2 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b 0.83 0.32 -0.3
3 AT2G17130 isocitrate dehydrogenase subunit 2 isocitrate dehydrogenase II,
isocitrate dehydrogenase subunit 2		 0.81 0.34 -0.31
4 AT4G39980 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1		 0.81 0.35 -0.34
5 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 0.81 0.33 -0.33
6 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 0.8 0.32 -0.31
7 AT5G61790 calnexin 1 ATCNX1, calnexin 1 0.78 0.31 -0.31
8 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 0.78 0.3 -0.34
9 AT1G29310 SecY protein transport family protein 0.78 0.33 -0.32
10 AT5G58290 regulatory particle triple-A ATPase 3 regulatory particle triple-A
ATPase 3		 0.77 0.32 -0.3
11 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 0.77 0.3 -0.31
12 AT1G30630 Coatomer epsilon subunit 0.76 0.31 -0.3
13 AT5G50960 nucleotide binding protein 35 NUCLEOTIDE BINDING PROTEIN 35,
nucleotide binding protein 35		 0.76 0.31 -0.31
14 AT5G23540 Mov34/MPN/PAD-1 family protein 0.75 0.34 -0.3
15 AT3G60450 Phosphoglycerate mutase family protein 0.75 0.31 -0.28
16 AT3G54960 PDI-like 1-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 1, PDI-like
1-3, PROTEIN DISULFIDE ISOMERASE
1, PDI-like 1-3		 0.74 0.31 -0.32
17 AT5G63700 zinc ion binding;DNA binding -0.73 0.32 -0.34
18 AT3G12700 Eukaryotic aspartyl protease family protein 0.73 0.32 -0.32
19 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 0.73 0.32 -0.31
20 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.72 0.32 -0.3
21 AT3G18760 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.72 0.32 -0.31
22 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.72 0.33 -0.32
23 AT5G10780 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP017207, transmembrane protein 85
(InterPro:IPR016687), Protein of unknown function DUF1077
(InterPro:IPR009445); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.71 0.31 -0.3
24 AT4G37670 N-acetyl-l-glutamate synthase 2 N-acetyl-l-glutamate synthase 2 0.71 0.32 -0.31
25 AT1G13650 BEST Arabidopsis thaliana protein match is: 18S
pre-ribosomal assembly protein gar2-related
(TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in
255 species: Archae - 22; Bacteria - 222; Metazoa - 684;
Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes -
2392 (source: NCBI BLink).		 -0.7 0.33 -0.31
26 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.31 -0.32
27 AT1G27450 adenine phosphoribosyl transferase 1 adenine phosphoribosyl transferase
1, ARABIDOPSIS THALIANA ADENINE
PHOSPHORIBOSYLTRANSFERASE 1		 0.7 0.33 -0.32
28 AT1G71810 Protein kinase superfamily protein -0.7 0.31 -0.31
29 AT2G30990 Protein of unknown function (DUF688) 0.69 0.33 -0.32
30 AT2G22980 serine carboxypeptidase-like 13 serine carboxypeptidase-like 13 -0.69 0.32 -0.31
31 AT2G34250 SecY protein transport family protein 0.69 0.32 -0.32
32 AT5G67420 LOB domain-containing protein 37 ASYMMETRIC LEAVES2-LIKE 39, LOB
domain-containing protein 37		 -0.69 0.31 -0.29
33 AT1G22410 Class-II DAHP synthetase family protein 0.68 0.33 -0.31
34 AT3G43240 ARID/BRIGHT DNA-binding domain-containing protein 0.68 0.34 -0.32
35 AT3G30300 O-fucosyltransferase family protein -0.67 0.34 -0.31
36 AT1G28680 HXXXD-type acyl-transferase family protein 0.67 0.31 -0.32
37 AT3G05230 Signal peptidase subunit 0.67 0.31 -0.32
38 AT1G29240 Protein of unknown function (DUF688) -0.66 0.29 -0.31
39 AT4G02030 Vps51/Vps67 family (components of vesicular transport)
protein		 0.66 0.28 -0.31
40 AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.32 -0.32
41 AT4G24830 arginosuccinate synthase family 0.66 0.33 -0.34
42 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 -0.65 0.31 -0.34
43 AT3G04450 Homeodomain-like superfamily protein -0.64 0.31 -0.32
44 AT4G37970 cinnamyl alcohol dehydrogenase 6 ATCAD6, cinnamyl alcohol
dehydrogenase 6		 -0.63 0.32 -0.32
45 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 -0.63 0.31 -0.31
46 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 -0.62 0.34 -0.32
47 AT5G13770 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.31 -0.32
48 AT2G17970 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.34 -0.33
49 AT1G54870 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.32 -0.29
50 AT5G40420 oleosin 2 OLEOSIN 2, oleosin 2 -0.61 0.32 -0.31
51 AT3G30460 RING/U-box superfamily protein -0.6 0.33 -0.3
52 AT5G22750 DNA/RNA helicase protein RAD5, RAD5A -0.6 0.31 -0.33
53 AT1G07485 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex,
embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis,
D bilateral stage; Has 5 Blast hits to 5 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.29
54 AT4G13450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.59 0.31 -0.34
55 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.33 -0.29
56 AT2G20670 Protein of unknown function (DUF506) -0.59 0.32 -0.34
57 AT5G51080 RNase H family protein -0.59 0.31 -0.31