AT3G20400 : EMBRYO DEFECTIVE 2743
Query Information
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AGICode AT3G20400
Description F-box associated ubiquitination effector family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G20400 F-box associated ubiquitination effector family protein EMBRYO DEFECTIVE 2743 1 0.31 -0.31
2 AT3G03690 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 unfertilized embryo sac 7 0.76 0.32 -0.32
3 AT3G61530 Phosphoenolpyruvate carboxylase family protein PANB2 -0.72 0.33 -0.32
4 AT4G16500 Cystatin/monellin superfamily protein -0.71 0.33 -0.32
5 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.71 0.3 -0.34
6 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 -0.7 0.32 -0.31
7 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 0.69 0.3 -0.31
8 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 -0.68 0.31 -0.31
9 AT4G39910 ubiquitin-specific protease 3 ubiquitin-specific protease 3,
ubiquitin-specific protease 3		 -0.68 0.32 -0.33
10 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 0.67 0.32 -0.31
11 AT1G08770 prenylated RAB acceptor 1.E prenylated RAB acceptor 1.E -0.67 0.34 -0.31
12 AT4G34400 AP2/B3-like transcriptional factor family protein 0.67 0.32 -0.32
13 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 -0.66 0.31 -0.32
14 AT1G18510 tetraspanin 16 tetraspanin 16 0.66 0.32 -0.3
15 AT3G56490 HIS triad family protein 3 HISTIDINE TRIAD NUCLEOTIDE-BINDING
1, HIS triad family protein 3		 -0.66 0.32 -0.34
16 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.66 0.31 -0.31
17 AT5G58640 Selenoprotein, Rdx type -0.66 0.3 -0.3
18 AT3G57390 AGAMOUS-like 18 AGAMOUS-like 18 -0.65 0.32 -0.31
19 AT2G46490 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits
to 34 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.32
20 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 -0.65 0.31 -0.31
21 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.65 0.33 -0.31
22 AT1G69760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26920.1); Has 51 Blast hits
to 51 proteins in 15 species: Archae - 0; Bacteria - 2;
Metazoa - 2; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.65 0.31 -0.33
23 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.65 0.29 -0.33
24 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 -0.65 0.3 -0.31
25 AT2G15780 Cupredoxin superfamily protein -0.65 0.3 -0.32
26 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.65 0.33 -0.31
27 AT3G14350 STRUBBELIG-receptor family 7 STRUBBELIG-receptor family 7 0.65 0.33 -0.3
28 AT3G12440 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.64 0.31 -0.33
29 AT2G19570 cytidine deaminase 1 AT-CDA1, cytidine deaminase 1,
DESZ		 -0.64 0.32 -0.31
30 AT5G43990 SET-domain containing protein lysine methyltransferase
family protein		 SET DOMAIN PROTEIN 18, SUVR2 0.64 0.32 -0.32
31 AT1G18210 Calcium-binding EF-hand family protein -0.64 0.32 -0.33
32 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.64 0.31 -0.32
33 AT1G77310 BEST Arabidopsis thaliana protein match is:
wound-responsive family protein (TAIR:AT1G21610.1); Has 493
Blast hits to 482 proteins in 163 species: Archae - 0;
Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65;
Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink).		 0.64 0.31 -0.32
34 AT2G01410 NHL domain-containing protein -0.63 0.3 -0.3
35 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.33 -0.32
36 AT5G10040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65207.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.3 -0.28
37 AT1G21210 wall associated kinase 4 wall associated kinase 4 0.63 0.29 -0.31
38 AT5G22030 ubiquitin-specific protease 8 ubiquitin-specific protease 8 0.63 0.35 -0.3
39 AT2G20330 Transducin/WD40 repeat-like superfamily protein -0.63 0.33 -0.32
40 AT2G45980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ATG8-interacting protein 1 -0.63 0.33 -0.31
41 AT5G55530 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.63 0.31 -0.31
42 AT3G25910 Protein of unknown function (DUF1644) -0.63 0.31 -0.33
43 AT4G29530 Pyridoxal phosphate phosphatase-related protein -0.62 0.3 -0.31
44 AT1G02750 Drought-responsive family protein -0.62 0.32 -0.32
45 AT2G01310 BEST Arabidopsis thaliana protein match is:
cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.1); Has
37 Blast hits to 37 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.33
46 AT5G39870 Protein of unknown function (DUF1216) 0.62 0.31 -0.32
47 AT5G18110 novel cap-binding protein novel cap-binding protein -0.62 0.33 -0.33
48 AT1G50250 FTSH protease 1 FTSH protease 1 0.62 0.3 -0.33
49 AT1G18610 Galactose oxidase/kelch repeat superfamily protein 0.62 0.33 -0.32
50 AT3G14410 Nucleotide/sugar transporter family protein -0.62 0.31 -0.31
51 AT2G20420 ATP citrate lyase (ACL) family protein -0.62 0.3 -0.33
52 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.62 0.32 -0.31
53 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.61 0.32 -0.33
54 AT5G62910 RING/U-box superfamily protein -0.61 0.31 -0.33
55 AT5G05100 Single-stranded nucleic acid binding R3H protein -0.61 0.3 -0.29
56 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.33 -0.32
57 AT5G42690 Protein of unknown function, DUF547 0.61 0.31 -0.3
58 AT3G29200 chorismate mutase 1 ARABIDOPSIS THALIANA CHORISMATE
MUTASE 1, chorismate mutase 1		 -0.61 0.32 -0.3
59 AT5G44730 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.61 0.32 -0.32
60 AT1G64160 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.61 0.32 -0.31
61 AT3G58160 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATMYOS3, MYOSIN XI J, MYOSIN A3,
MYOSIN XI-16, XIJ		 0.6 0.31 -0.31
62 AT3G62440 F-box/RNI-like superfamily protein secondary wall
thickening-associated F-box 1		 0.6 0.31 -0.32
63 AT1G55940 cytochrome P450, family 708, subfamily A, polypeptide 1 cytochrome P450, family 708,
subfamily A, polypeptide 1		 0.6 0.3 -0.32
64 AT3G55690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits
to 69 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.29
65 AT1G05720 selenoprotein family protein -0.6 0.3 -0.31
66 AT2G34520 mitochondrial ribosomal protein S14 mitochondrial ribosomal protein
S14		 -0.6 0.32 -0.29
67 AT1G19530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl,
root, flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 47 Blast hits to 47 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.34 -0.33
68 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.6 0.33 -0.32
69 AT3G12630 A20/AN1-like zinc finger family protein stress associated protein 5 -0.6 0.3 -0.32
70 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 0.59 0.3 -0.34
71 AT4G17486 PPPDE putative thiol peptidase family protein -0.59 0.33 -0.32
72 AT1G17530 translocase of inner mitochondrial membrane 23 translocase of inner mitochondrial
membrane 23, translocase of inner
mitochondrial membrane 23		 -0.59 0.32 -0.31
73 AT5G67530 plant U-box 49 PLANT U-BOX 49, plant U-box 49 -0.59 0.32 -0.31
74 AT3G29630 UDP-Glycosyltransferase superfamily protein 0.59 0.3 -0.32
75 AT4G30050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.31 -0.3
76 AT4G15430 ERD (early-responsive to dehydration stress) family protein 0.59 0.33 -0.31
77 AT2G27990 BEL1-like homeodomain 8 BEL1-like homeodomain 8,
POUND-FOOLISH		 0.59 0.31 -0.31
78 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 -0.59 0.31 -0.3
79 AT1G57540 unknown protein; Has 29 Blast hits to 29 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.28
80 AT4G27540 prenylated RAB acceptor 1.H prenylated RAB acceptor 1.H -0.58 0.32 -0.31
81 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.32 -0.31
82 AT5G44480 NAD(P)-binding Rossmann-fold superfamily protein DEFECTIVE UGE IN ROOT -0.58 0.31 -0.3
83 AT5G39250 F-box family protein -0.58 0.32 -0.32
84 AT5G56770 BEST Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 41 Blast hits to 41
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.31 -0.32
85 AT4G23960 F-box family protein 0.58 0.33 -0.27
86 AT5G63260 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.58 0.3 -0.3
87 AT2G14595 transposable element gene 0.58 0.32 -0.32
88 AT4G10750 Phosphoenolpyruvate carboxylase family protein -0.58 0.31 -0.31
89 AT1G53460 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF
zinc finger-like superfamily protein (TAIR:AT1G70650.2);
Has 485 Blast hits to 413 proteins in 88 species: Archae -
11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101;
Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).		 -0.57 0.31 -0.31
90 AT1G38950 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.57 0.32 -0.33
91 AT4G33720 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.57 0.31 -0.31
92 AT2G31340 embryo defective 1381 embryo defective 1381 0.57 0.31 -0.31
93 AT4G37340 cytochrome P450, family 81, subfamily D, polypeptide 3 cytochrome P450, family 81,
subfamily D, polypeptide 3		 0.57 0.32 -0.31
94 AT3G19770 Vacuolar sorting protein 9 (VPS9) domain ARABIDOPSIS THALIANA VACUOLAR
PROTEIN SORTING 9A, VPS9, VPS9A		 -0.57 0.3 -0.33
95 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 -0.57 0.31 -0.29
96 AT3G43900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43910.1); Has 15 Blast hits
to 15 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.35 -0.31
97 AT1G07460 Concanavalin A-like lectin family protein -0.57 0.31 -0.32
98 AT1G68340 Protein of unknown function (DUF1639) -0.57 0.31 -0.3
99 AT1G07485 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex,
embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis,
D bilateral stage; Has 5 Blast hits to 5 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.31 -0.31
100 AT1G50160 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT2G04420.1); Has 34 Blast hits to 34 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.3 -0.29
101 AT3G12900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.57 0.31 -0.31
102 AT1G77730 Pleckstrin homology (PH) domain superfamily protein 0.57 0.31 -0.32
103 AT2G38830 Ubiquitin-conjugating enzyme/RWD-like protein -0.57 0.32 -0.31
104 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.33
105 AT1G58100 TCP family transcription factor TCP domain protein 8 -0.57 0.31 -0.32
106 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.56 0.32 -0.31
107 AT4G13570 histone H2A 4 histone H2A 4 0.56 0.31 -0.32
108 AT1G41870 transposable element gene 0.56 0.3 -0.32
109 AT3G28630 Protein of unknown function (DUF569) 0.56 0.31 -0.34
110 AT2G27395 pseudogene of cysteine protease-related 0.56 0.31 -0.29
111 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 0.55 0.33 -0.3
112 AT5G52260 myb domain protein 19 myb domain protein 19, myb domain
protein 19		 0.55 0.31 -0.3
113 AT4G05620 Galactose oxidase/kelch repeat superfamily protein 0.55 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0192 Oxalic acid - Oxalate ascorbate degradation 0.74 0.43 -0.49 C0192