AT3G20440 : BRANCHING ENZYME 1
Query Information
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AGICode AT3G20440
Description Alpha amylase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G20440 Alpha amylase family protein BRANCHING ENZYME 1, EMBRYO
DEFECTIVE 2729		 1 0.32 -0.32
2 AT4G31210 DNA topoisomerase, type IA, core 0.81 0.31 -0.3
3 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.79 0.3 -0.32
4 AT5G16620 hydroxyproline-rich glycoprotein family protein translocon at the inner envelope
membrane of chloroplasts 40,
pigment defective embryo 120,
translocon at the inner envelope
membrane of chloroplasts 40		 0.78 0.31 -0.3
5 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.78 0.32 -0.3
6 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.77 0.32 -0.34
7 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.77 0.32 -0.31
8 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 0.76 0.31 -0.34
9 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.76 0.32 -0.33
10 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.76 0.32 -0.31
11 AT3G57430 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 84 0.76 0.33 -0.32
12 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.75 0.3 -0.31
13 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.31 -0.32
14 AT5G52860 ABC-2 type transporter family protein ATP-binding cassette G8 0.75 0.31 -0.31
15 AT5G51120 polyadenylate-binding protein 1 POLYADENYLATE-BINDING PROTEIN 1,
polyadenylate-binding protein 1		 0.74 0.32 -0.3
16 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.74 0.34 -0.33
17 AT5G62990 Ubiquitin carboxyl-terminal hydrolase family protein embryo defective 1692 0.73 0.33 -0.3
18 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.73 0.33 -0.34
19 AT2G40110 Yippee family putative zinc-binding protein -0.73 0.3 -0.31
20 AT1G24440 RING/U-box superfamily protein -0.73 0.29 -0.33
21 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.73 0.32 -0.31
22 AT1G76400 Ribophorin I 0.72 0.31 -0.33
23 AT1G24310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 2922 Blast hits to 2454
proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa
- 1043; Fungi - 654; Plants - 388; Viruses - 11; Other
Eukaryotes - 769 (source: NCBI BLink).		 0.72 0.29 -0.31
24 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.71 0.3 -0.31
25 AT5G64150 RNA methyltransferase family protein 0.71 0.34 -0.29
26 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.71 0.31 -0.33
27 AT3G14900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: embryo development; LOCATED IN: chloroplast;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13
growth stages; Has 17135 Blast hits to 10204 proteins in
644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536;
Fungi - 2506; Plants - 1043; Viruses - 361; Other
Eukaryotes - 5958 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3120 0.71 0.3 -0.32
28 AT3G06200 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.31
29 AT5G44785 organellar single-stranded DNA binding protein 3 organellar single-stranded DNA
binding protein 3		 0.7 0.32 -0.32
30 AT5G06810 Mitochondrial transcription termination factor family
protein		 0.7 0.31 -0.33
31 AT5G58900 Homeodomain-like transcriptional regulator 0.7 0.32 -0.33
32 AT1G62085 Mitochondrial transcription termination factor family
protein		 0.69 0.32 -0.33
33 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.69 0.32 -0.32
34 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.31 -0.32
35 AT3G10690 DNA GYRASE A DNA GYRASE A 0.68 0.31 -0.3
36 AT5G65900 DEA(D/H)-box RNA helicase family protein 0.68 0.31 -0.3
37 AT5G66250 kinectin-related -0.67 0.31 -0.29
38 AT1G03320 unknown protein; Has 1038 Blast hits to 683 proteins in 112
species: Archae - 4; Bacteria - 14; Metazoa - 318; Fungi -
117; Plants - 86; Viruses - 8; Other Eukaryotes - 491
(source: NCBI BLink).		 0.67 0.33 -0.3
39 AT4G19610 nucleotide binding;nucleic acid binding;RNA binding 0.67 0.33 -0.31
40 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.66 0.32 -0.32
41 AT1G04960 Protein of unknown function (DUF1664) -0.64 0.31 -0.3
42 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.63 0.31 -0.31
43 AT1G35330 RING/U-box superfamily protein -0.62 0.3 -0.32
44 AT5G14650 Pectin lyase-like superfamily protein -0.62 0.3 -0.34
45 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.31 -0.31
46 AT4G10500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.3 -0.33
47 AT1G30200 F-box family protein -0.61 0.3 -0.32
48 AT4G14060 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.6 0.31 -0.3
49 AT2G15535 low-molecular-weight cysteine-rich 10 low-molecular-weight cysteine-rich
10		 -0.6 0.3 -0.32
50 AT2G18620 Terpenoid synthases superfamily protein -0.59 0.31 -0.3
51 AT4G00940 Dof-type zinc finger DNA-binding family protein -0.59 0.32 -0.32
52 AT4G15120 VQ motif-containing protein -0.59 0.34 -0.32
53 AT1G49710 fucosyltransferase 12 ATFUT12, FUCT2, FUCTB,
fucosyltransferase 12		 -0.57 0.3 -0.32
54 AT3G55980 salt-inducible zinc finger 1 ATSZF1, salt-inducible zinc finger
1		 -0.56 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
55 C0134 Kaempferol-7-O-neohesperidoside - - - 0.82 0.46 -0.44