AT3G12670 : embryo defective 2742
Query Information
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AGICode AT3G12670
Description CTP synthase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12670 CTP synthase family protein embryo defective 2742 1 0.34 -0.32
2 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.82 0.29 -0.32
3 AT5G27540 MIRO-related GTP-ase 1 embryo defective 2473,
MIRO-related GTP-ase 1		 0.77 0.31 -0.3
4 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 0.77 0.33 -0.32
5 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.75 0.3 -0.3
6 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5		 0.75 0.31 -0.33
7 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.75 0.3 -0.31
8 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 0.75 0.33 -0.34
9 AT4G09510 cytosolic invertase 2 alkaline/neutral invertase I,
cytosolic invertase 2		 0.75 0.33 -0.31
10 AT4G12240 zinc finger (C2H2 type) family protein 0.74 0.3 -0.33
11 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 -0.74 0.33 -0.31
12 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.73 0.33 -0.32
13 AT2G19450 membrane bound O-acyl transferase (MBOAT) family protein ABX45, AS11, Arabidopsis thaliana
acyl-CoA:diacylglycerol
acyltransferase,
acyl-CoA:diacylglycerol
acyltransferase 1, RDS1,
TRIACYLGLYCEROL BIOSYNTHESIS
DEFECT 1		 0.73 0.31 -0.32
14 AT4G29840 Pyridoxal-5'-phosphate-dependent enzyme family protein METHIONINE OVER-ACCUMULATOR 2,
THREONINE SYNTHASE		 0.73 0.32 -0.3
15 AT2G24500 Zinc finger protein 622 FZF 0.73 0.32 -0.3
16 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.73 0.31 -0.32
17 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.73 0.32 -0.32
18 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.73 0.3 -0.3
19 AT1G55500 evolutionarily conserved C-terminal region 4 evolutionarily conserved
C-terminal region 4		 0.73 0.31 -0.29
20 AT2G07180 Protein kinase superfamily protein -0.73 0.33 -0.34
21 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.72 0.31 -0.31
22 AT5G42920 THO complex, subunit 5 AtTHO5, THO5 0.72 0.3 -0.33
23 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.3 -0.32
24 AT2G42390 protein kinase C substrate, heavy chain-related -0.72 0.31 -0.31
25 AT3G07310 Protein of unknown function (DUF760) -0.72 0.31 -0.32
26 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 -0.72 0.32 -0.34
27 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 0.72 0.33 -0.32
28 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.72 0.3 -0.33
29 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.72 0.29 -0.32
30 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.72 0.31 -0.33
31 AT1G73177 bonsai anaphase-promoting complex 13,
BONSAI		 0.71 0.31 -0.31
32 AT2G46520 cellular apoptosis susceptibility protein, putative /
importin-alpha re-exporter, putative		 0.71 0.32 -0.32
33 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.71 0.3 -0.33
34 AT5G48120 ARM repeat superfamily protein 0.71 0.32 -0.32
35 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.71 0.31 -0.33
36 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.71 0.32 -0.3
37 AT3G18860 transducin family protein / WD-40 repeat family protein 0.71 0.32 -0.31
38 AT1G66260 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.3 -0.32
39 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein 0.7 0.3 -0.32
40 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis		 0.7 0.3 -0.33
41 AT3G10050 L-O-methylthreonine resistant 1 L-O-methylthreonine resistant 1 0.69 0.31 -0.33
42 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein -0.69 0.29 -0.3
43 AT2G46220 Uncharacterized conserved protein (DUF2358) -0.69 0.32 -0.3
44 AT3G44680 histone deacetylase 9 HDA09, histone deacetylase 9 0.69 0.31 -0.32
45 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.69 0.34 -0.32
46 AT1G55930 CBS domain-containing protein / transporter associated
domain-containing protein		 0.69 0.32 -0.31
47 AT1G47720 Primosome PriB/single-strand DNA-binding Organellar Single-stranded 0.69 0.31 -0.34
48 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.34 -0.34
49 AT5G46210 cullin4 ATCUL4, cullin4 0.69 0.3 -0.32
50 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.69 0.31 -0.31
51 AT3G06480 DEAD box RNA helicase family protein 0.69 0.33 -0.33
52 AT1G13120 embryo defective 1745 0.69 0.34 -0.31
53 AT5G05520 Outer membrane OMP85 family protein 0.68 0.32 -0.31
54 AT2G04450 nudix hydrolase homolog 6 nudix hydrolase homolog 6,
Arabidopsis thaliana nucleoside
diphosphate linked to some moiety
X 6, nudix hydrolase homolog 6,
nucleoside diphosphates linked to
some moiety X 6		 -0.68 0.32 -0.31
55 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 0.68 0.32 -0.33
56 AT1G50140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.31 -0.33
57 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.68 0.29 -0.32
58 AT4G19610 nucleotide binding;nucleic acid binding;RNA binding 0.68 0.31 -0.32
59 AT5G66040 sulfurtransferase protein 16 sulfurtransferase protein 16 -0.68 0.32 -0.32
60 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B 0.68 0.33 -0.35
61 AT1G03400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.68 0.3 -0.31
62 AT1G10390 Nucleoporin autopeptidase 0.68 0.34 -0.32
63 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1		 0.68 0.33 -0.32
64 AT3G52720 alpha carbonic anhydrase 1 alpha carbonic anhydrase 1, A.
THALIANA ALPHA CARBONIC ANHYDRASE
1, CARBONIC ANHYDRASE 1		 -0.67 0.31 -0.29
65 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein 0.67 0.32 -0.33
66 AT4G31330 Protein of unknown function, DUF599 -0.67 0.3 -0.33
67 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 0.67 0.31 -0.28
68 AT1G74250 DNAJ heat shock N-terminal domain-containing protein 0.67 0.33 -0.3
69 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 0.66 0.34 -0.31
70 AT4G34500 Protein kinase superfamily protein -0.66 0.31 -0.31
71 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.66 0.32 -0.3
72 AT5G25240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.35 -0.3
73 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 -0.66 0.31 -0.31
74 AT2G11000 MAK10 homologue MAK10 homologue, MAK10, MAK10
homologue		 0.66 0.3 -0.32
75 AT3G47836 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.33 -0.32
76 AT3G58570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.29 -0.34
77 AT3G46540 ENTH/VHS family protein -0.66 0.3 -0.31
78 AT5G01290 mRNA capping enzyme family protein 0.66 0.29 -0.33
79 AT2G14560 Protein of unknown function (DUF567) LATE UPREGULATED IN RESPONSE TO
HYALOPERONOSPORA PARASITICA		 -0.66 0.33 -0.3
80 AT1G19000 Homeodomain-like superfamily protein -0.65 0.31 -0.31
81 AT1G78930 Mitochondrial transcription termination factor family
protein		 0.65 0.3 -0.34
82 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.32 -0.33
83 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.65 0.32 -0.3
84 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.65 0.33 -0.33
85 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.65 0.31 -0.31
86 AT1G04860 ubiquitin-specific protease 2 ATUBP2, ubiquitin-specific
protease 2		 0.65 0.33 -0.32
87 AT1G74710 ADC synthase superfamily protein ARABIDOPSIS ISOCHORISMATE SYNTHASE
1, ENHANCED DISEASE SUSCEPTIBILITY
TO ERYSIPHE ORONTII 16,
ISOCHORISMATE SYNTHASE 1,
SALICYLIC ACID INDUCTION DEFICIENT
2		 -0.65 0.31 -0.31
88 AT5G13280 aspartate kinase 1 ASPARTATE KINASE, aspartate kinase
1, ASPARTATE KINASE 1		 0.64 0.32 -0.32
89 AT4G02480 AAA-type ATPase family protein 0.64 0.3 -0.32
90 AT3G15980 Coatomer, beta' subunit 0.64 0.33 -0.31
91 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 -0.64 0.32 -0.32
92 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 -0.64 0.32 -0.3
93 AT5G17020 exportin 1A ATCRM1, ARABIDOPSIS THALIANA
EXPORTIN 1, HEAT-INTOLERANT 2,
EXPORTIN 1, exportin 1A		 0.64 0.29 -0.34
94 AT4G21180 DnaJ / Sec63 Brl domains-containing protein ATERDJ2B 0.64 0.31 -0.3
95 AT5G58210 hydroxyproline-rich glycoprotein family protein 0.64 0.34 -0.32
96 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 0.64 0.31 -0.3
97 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 -0.64 0.31 -0.33
98 AT1G07160 Protein phosphatase 2C family protein 0.64 0.32 -0.31
99 AT3G01690 alpha/beta-Hydrolases superfamily protein -0.63 0.33 -0.29
100 AT1G26110 decapping 5 decapping 5 0.63 0.3 -0.32
101 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.63 0.28 -0.31
102 AT2G45720 ARM repeat superfamily protein -0.63 0.31 -0.31
103 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.63 0.3 -0.29
104 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.63 0.31 -0.31
105 AT5G54660 HSP20-like chaperones superfamily protein -0.63 0.29 -0.31
106 AT5G25130 cytochrome P450, family 71, subfamily B, polypeptide 12 cytochrome P450, family 71,
subfamily B, polypeptide 12		 -0.63 0.31 -0.29
107 AT2G20670 Protein of unknown function (DUF506) -0.62 0.31 -0.3
108 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 -0.62 0.32 -0.32
109 AT1G13610 alpha/beta-Hydrolases superfamily protein -0.62 0.32 -0.29
110 AT5G59720 heat shock protein 18.2 heat shock protein 18.2 -0.62 0.32 -0.31
111 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 -0.62 0.31 -0.32
112 AT1G12550 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 hydroxypyruvate reductase 3 -0.62 0.3 -0.31
113 AT5G07080 HXXXD-type acyl-transferase family protein -0.61 0.31 -0.32
114 AT3G10150 purple acid phosphatase 16 ATPAP16, purple acid phosphatase
16		 -0.61 0.32 -0.31
115 AT3G16990 Haem oxygenase-like, multi-helical -0.61 0.32 -0.31
116 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.61 0.32 -0.31
117 AT1G13470 Protein of unknown function (DUF1262) -0.61 0.29 -0.29
118 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.61 0.3 -0.3
119 AT5G24530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DOWNY MILDEW RESISTANT 6 -0.6 0.3 -0.31
120 AT5G22460 alpha/beta-Hydrolases superfamily protein -0.6 0.31 -0.34
121 AT1G35710 Protein kinase family protein with leucine-rich repeat
domain		 -0.6 0.31 -0.32
122 AT2G28630 3-ketoacyl-CoA synthase 12 3-ketoacyl-CoA synthase 12 -0.6 0.32 -0.31
123 AT1G11380 PLAC8 family protein -0.6 0.33 -0.32
124 AT4G02075 RING/FYVE/PHD zinc finger superfamily protein pitchoun 1 -0.6 0.31 -0.3
125 AT1G64620 Dof-type zinc finger DNA-binding family protein -0.59 0.31 -0.33
126 AT1G67870 glycine-rich protein -0.59 0.3 -0.3
127 AT4G26070 MAP kinase/ ERK kinase 1 ATMEK1, MAP kinase/ ERK kinase 1,
MITOGEN ACTIVATED PROTEIN KINASE
KINASE 1, NMAPKK		 -0.59 0.31 -0.33
128 AT2G02580 cytochrome P450, family 71, subfamily B, polypeptide 9 cytochrome P450, family 71,
subfamily B, polypeptide 9		 -0.59 0.31 -0.32
129 AT1G54740 Protein of unknown function (DUF3049) -0.59 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0215 PR_MST_2527.1 - - - 0.8 0.44 -0.44
131 C0065 Cellobiose D-(+)-Cellobiose Cellobiose xyloglucan biosynthesis,
starch degradation I 		0.68 0.3 -0.33 C0065
132 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		-0.62 0.47 -0.47 C0108