AGICode | AT3G27420 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G27420 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
1 | 0.29 | -0.31 | |||
2 | AT2G19380 | RNA recognition motif (RRM)-containing protein | -0.73 | 0.3 | -0.32 | |||
3 | AT3G01160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink). |
-0.72 | 0.33 | -0.3 | |||
4 | AT1G47340 | F-box and associated interaction domains-containing protein | 0.72 | 0.32 | -0.33 | |||
5 | AT5G23480 | SWIB/MDM2 domain;Plus-3;GYF | -0.71 | 0.32 | -0.32 | |||
6 | AT4G35310 | calmodulin-domain protein kinase 5 | ATCPK5, calmodulin-domain protein kinase 5 |
-0.71 | 0.34 | -0.3 | ||
7 | AT5G19860 | Protein of unknown function, DUF538 | 0.71 | 0.32 | -0.33 | |||
8 | AT1G19860 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.7 | 0.33 | -0.31 | |||
9 | AT2G15960 | unknown protein; Has 14 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.33 | -0.3 | |||
10 | AT1G56090 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.69 | 0.31 | -0.32 | |||
11 | AT3G10530 | Transducin/WD40 repeat-like superfamily protein | -0.68 | 0.31 | -0.3 | |||
12 | AT4G31790 | Tetrapyrrole (Corrin/Porphyrin) Methylases | -0.68 | 0.34 | -0.3 | |||
13 | AT1G02820 | Late embryogenesis abundant 3 (LEA3) family protein | -0.68 | 0.31 | -0.34 | |||
14 | AT5G39840 | ATP-dependent RNA helicase, mitochondrial, putative | -0.67 | 0.32 | -0.3 | |||
15 | AT5G12470 | Protein of unknown function (DUF3411) | -0.67 | 0.32 | -0.31 | |||
16 | AT2G27775 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.3 | -0.33 | |||
17 | AT1G03090 | methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) |
MCCA | 0.67 | 0.33 | -0.31 | ||
18 | AT3G58510 | DEA(D/H)-box RNA helicase family protein | -0.66 | 0.34 | -0.34 | |||
19 | AT2G36070 | translocase inner membrane subunit 44-2 | translocase inner membrane subunit 44-2, translocase inner membrane subunit 44-2 |
-0.66 | 0.31 | -0.31 | ||
20 | AT1G08960 | cation exchanger 11 | CATION EXCHANGER 11, Arabidopsis thaliana cation calcium exchanger 5, cation exchanger 11, cation calcium exchanger 5 |
-0.66 | 0.33 | -0.32 | ||
21 | AT5G38890 | Nucleic acid-binding, OB-fold-like protein | -0.66 | 0.31 | -0.31 | |||
22 | AT4G20350 | oxidoreductases | -0.66 | 0.34 | -0.33 | |||
23 | AT4G26980 | RNI-like superfamily protein | 0.66 | 0.32 | -0.31 | |||
24 | AT5G66540 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.65 | 0.32 | -0.32 | |||
25 | AT4G38760 | Protein of unknown function (DUF3414) | -0.65 | 0.31 | -0.31 | |||
26 | AT5G09900 | 26S proteasome regulatory subunit, putative (RPN5) | EMBRYO DEFECTIVE 2107, MARIPOSA, REGULATORY PARTICLE NON-ATPASE SUBUNIT 5A |
-0.65 | 0.3 | -0.31 | ||
27 | AT5G14760 | L-aspartate oxidase | L-aspartate oxidase | -0.65 | 0.33 | -0.31 | ||
28 | AT1G07230 | non-specific phospholipase C1 | non-specific phospholipase C1 | 0.64 | 0.33 | -0.33 | ||
29 | AT1G13880 | ELM2 domain-containing protein | 0.64 | 0.31 | -0.31 | |||
30 | AT4G26600 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.64 | 0.33 | -0.32 | |||
31 | AT4G07410 | Transducin family protein / WD-40 repeat family protein | POPCORN | -0.64 | 0.3 | -0.3 | ||
32 | AT3G15080 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.64 | 0.3 | -0.33 | |||
33 | AT1G52360 | Coatomer, beta' subunit | -0.64 | 0.33 | -0.3 | |||
34 | AT3G48710 | DEK domain-containing chromatin associated protein | 0.64 | 0.31 | -0.34 | |||
35 | AT3G26510 | Octicosapeptide/Phox/Bem1p family protein | 0.64 | 0.31 | -0.33 | |||
36 | AT5G62330 | BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.31 | -0.32 | |||
37 | AT3G01820 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.63 | 0.3 | -0.3 | |||
38 | AT4G12410 | SAUR-like auxin-responsive protein family | 0.63 | 0.29 | -0.32 | |||
39 | AT4G25270 | Tetratricopeptide repeat (TPR)-like superfamily protein | organelle transcript processing 70 | -0.63 | 0.34 | -0.31 | ||
40 | AT5G58370 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.63 | 0.31 | -0.35 | |||
41 | AT3G10690 | DNA GYRASE A | DNA GYRASE A | -0.63 | 0.28 | -0.33 | ||
42 | AT3G22480 | prefoldin 2 | prefoldin 2 | -0.63 | 0.31 | -0.33 | ||
43 | AT3G44850 | Protein kinase superfamily protein | -0.63 | 0.31 | -0.31 | |||
44 | AT1G30960 | GTP-binding family protein | -0.63 | 0.3 | -0.33 | |||
45 | AT3G11964 | RNA binding;RNA binding | -0.63 | 0.32 | -0.32 | |||
46 | AT1G10150 | Carbohydrate-binding protein | 0.62 | 0.32 | -0.32 | |||
47 | AT2G46550 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.31 | -0.32 | |||
48 | AT1G17690 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). |
nucleolar factor 1 | -0.62 | 0.31 | -0.31 | ||
49 | AT5G11090 | serine-rich protein-related | 0.62 | 0.32 | -0.31 | |||
50 | AT2G37780 | Cysteine/Histidine-rich C1 domain family protein | -0.62 | 0.31 | -0.34 | |||
51 | AT1G70290 | trehalose-6-phosphatase synthase S8 | ATTPS8, ATTPSC, trehalose-6-phosphatase synthase S8 |
0.62 | 0.31 | -0.32 | ||
52 | AT5G51210 | oleosin3 | oleosin3 | 0.62 | 0.32 | -0.3 | ||
53 | AT5G47455 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.31 | -0.33 | |||
54 | AT1G06560 | NOL1/NOP2/sun family protein | -0.61 | 0.32 | -0.33 | |||
55 | AT5G51720 | 2 iron, 2 sulfur cluster binding | -0.61 | 0.32 | -0.33 | |||
56 | AT3G44450 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.28 | -0.33 | |||
57 | AT3G14790 | rhamnose biosynthesis 3 | ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 3, rhamnose biosynthesis 3 |
-0.61 | 0.3 | -0.33 | ||
58 | AT3G19100 | Protein kinase superfamily protein | 0.61 | 0.3 | -0.33 | |||
59 | AT3G60180 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.61 | 0.34 | -0.32 | |||
60 | AT5G24610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.6 | 0.3 | -0.33 | |||
61 | AT5G24850 | cryptochrome 3 | cryptochrome 3 | -0.6 | 0.31 | -0.32 | ||
62 | AT1G21770 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.6 | 0.31 | -0.32 | |||
63 | AT3G48810 | Pentatricopeptide repeat (PPR) superfamily protein | -0.6 | 0.32 | -0.34 | |||
64 | AT3G43590 | zinc knuckle (CCHC-type) family protein | -0.6 | 0.32 | -0.32 | |||
65 | AT3G26940 | Protein kinase superfamily protein | CONSTITUTIVE DIFFERENTIAL GROWTH 1 | -0.6 | 0.3 | -0.33 | ||
66 | AT2G04240 | RING/U-box superfamily protein | XERICO | 0.6 | 0.31 | -0.33 | ||
67 | AT3G63000 | NPL4-like protein 1 | NPL4-like protein 1 | 0.6 | 0.3 | -0.35 | ||
68 | AT3G03060 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.6 | 0.33 | -0.31 | |||
69 | AT5G10960 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.6 | 0.33 | -0.3 | |||
70 | AT2G44850 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast hits to 138 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.6 | 0.3 | -0.33 | |||
71 | AT2G04038 | basic leucine-zipper 48 | basic leucine-zipper 48, basic leucine-zipper 48 |
0.59 | 0.31 | -0.3 | ||
72 | AT1G42420 | transposable element gene | 0.59 | 0.33 | -0.29 | |||
73 | AT2G26070 | Protein of unknown function (DUF778) | REVERSION-TO-ETHYLENE SENSITIVITY1 | 0.58 | 0.32 | -0.31 | ||
74 | AT1G11270 | F-box and associated interaction domains-containing protein | 0.58 | 0.31 | -0.31 | |||
75 | AT1G28330 | dormancy-associated protein-like 1 | DORMANCY-ASSOCIATED PROTEIN 1, dormancy-associated protein-like 1 |
0.58 | 0.3 | -0.33 | ||
76 | AT3G54380 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3C, yeast Sac3 homolog C | 0.58 | 0.33 | -0.32 | ||
77 | AT2G30540 | Thioredoxin superfamily protein | 0.58 | 0.31 | -0.32 | |||
78 | AT1G55590 | RNI-like superfamily protein | 0.56 | 0.32 | -0.32 | |||
79 | AT1G79420 | Protein of unknown function (DUF620) | 0.55 | 0.34 | -0.29 | |||
80 | AT5G25900 | GA requiring 3 | ARABIDOPSIS THALIANA ENT-KAURENE OXIDASE 1, CYTOCHROME P450 701 A3, GA requiring 3 |
0.55 | 0.3 | -0.31 | ||
81 | AT5G53830 | VQ motif-containing protein | 0.55 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
82 | C0180 | MST_2539.9 | - | - | - | 0.67 | 0.45 | -0.48 |