AGICode | AT3G18380 |
Description | sequence-specific DNA binding transcription factors;sequence-specific DNA binding |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G18380 | sequence-specific DNA binding transcription factors;sequence-specific DNA binding |
SAWADEE homeodomain homolog 2 | 1 | 0.31 | -0.31 | ||
2 | AT2G40540 | potassium transporter 2 | ATKT2, ATKUP2, potassium transporter 2, KUP2, SHY3, TRK2 |
0.79 | 0.33 | -0.31 | ||
3 | AT4G08940 | Ubiquitin carboxyl-terminal hydrolase family protein | 0.79 | 0.31 | -0.3 | |||
4 | AT1G68765 | Putative membrane lipoprotein | INFLORESCENCE DEFICIENT IN ABSCISSION |
-0.76 | 0.3 | -0.31 | ||
5 | AT5G01390 | DNAJ heat shock family protein | 0.75 | 0.31 | -0.32 | |||
6 | AT5G12440 | CCCH-type zinc fingerfamily protein with RNA-binding domain | 0.75 | 0.3 | -0.33 | |||
7 | AT3G59810 | Small nuclear ribonucleoprotein family protein | 0.74 | 0.32 | -0.32 | |||
8 | AT2G01300 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.31 | -0.33 | |||
9 | AT2G42760 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
-0.72 | 0.31 | -0.29 | |||
10 | AT2G32590 | LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). |
EMBRYO DEFECTIVE 2795 | 0.72 | 0.3 | -0.32 | ||
11 | AT3G04550 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.71 | 0.3 | -0.3 | |||
12 | AT2G27500 | Glycosyl hydrolase superfamily protein | -0.71 | 0.31 | -0.32 | |||
13 | AT3G62300 | DOMAIN OF UNKNOWN FUNCTION 724 7 | DOMAIN OF UNKNOWN FUNCTION 724 7, DOMAIN OF UNKNOWN FUNCTION 724 7 |
0.7 | 0.31 | -0.3 | ||
14 | AT2G30620 | winged-helix DNA-binding transcription factor family protein |
0.7 | 0.29 | -0.32 | |||
15 | AT1G35350 | EXS (ERD1/XPR1/SYG1) family protein | -0.7 | 0.33 | -0.34 | |||
16 | AT1G28480 | Thioredoxin superfamily protein | GRX480, roxy19 | -0.7 | 0.33 | -0.32 | ||
17 | AT3G54950 | patatin-like protein 6 | patatin-like protein 6, PATATIN-LIKE PROTEIN 7, patatin-related phospholipase IIIbeta |
-0.69 | 0.32 | -0.32 | ||
18 | AT5G15440 | EID1-like 1 | EID1-like 1 | 0.69 | 0.32 | -0.31 | ||
19 | AT1G73710 | Pentatricopeptide repeat (PPR) superfamily protein | 0.69 | 0.31 | -0.32 | |||
20 | AT1G06080 | delta 9 desaturase 1 | delta 9 desaturase 1 | 0.68 | 0.33 | -0.31 | ||
21 | AT1G56180 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). |
0.68 | 0.34 | -0.32 | |||
22 | AT2G21000 | transposable element gene | 0.68 | 0.32 | -0.35 | |||
23 | AT1G32920 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.31 | -0.33 | |||
24 | AT3G02400 | SMAD/FHA domain-containing protein | 0.67 | 0.32 | -0.32 | |||
25 | AT1G47530 | MATE efflux family protein | 0.67 | 0.33 | -0.3 | |||
26 | AT2G22760 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.67 | 0.31 | -0.32 | |||
27 | AT1G22380 | UDP-glucosyl transferase 85A3 | UDP-glucosyl transferase 85A3, UDP-glucosyl transferase 85A3 |
-0.66 | 0.3 | -0.33 | ||
28 | AT4G38240 | alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative |
COMPLEX GLYCAN LESS, COMPLEX GLYCAN LESS 1, N-ACETYLGLUCOSAMINYLTRANSFERASE I |
-0.66 | 0.32 | -0.31 | ||
29 | AT1G32340 | NDR1/HIN1-like 8 | NDR1/HIN1-like 8 | -0.66 | 0.31 | -0.32 | ||
30 | AT3G16860 | COBRA-like protein 8 precursor | COBRA-like protein 8 precursor | -0.66 | 0.3 | -0.32 | ||
31 | AT4G35880 | Eukaryotic aspartyl protease family protein | 0.66 | 0.32 | -0.32 | |||
32 | AT5G11150 | vesicle-associated membrane protein 713 | vesicle-associated membrane protein 713, VAMP713, vesicle-associated membrane protein 713 |
0.66 | 0.32 | -0.31 | ||
33 | AT1G04020 | breast cancer associated RING 1 | ATBARD1, breast cancer associated RING 1, ROW1 |
0.65 | 0.3 | -0.31 | ||
34 | AT2G10620 | transposable element gene | 0.65 | 0.32 | -0.31 | |||
35 | AT3G16010 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.65 | 0.31 | -0.33 | |||
36 | AT2G10400 | transposable element gene | 0.65 | 0.33 | -0.31 | |||
37 | AT3G06590 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.65 | 0.33 | -0.3 | |||
38 | AT3G57530 | calcium-dependent protein kinase 32 | ATCPK32, CDPK32, calcium-dependent protein kinase 32 |
-0.64 | 0.33 | -0.3 | ||
39 | AT4G00190 | pectin methylesterase 38 | A. THALIANA PECTIN METHYLESTERASE 38, pectin methylesterase 38 |
0.64 | 0.31 | -0.31 | ||
40 | AT4G37340 | cytochrome P450, family 81, subfamily D, polypeptide 3 | cytochrome P450, family 81, subfamily D, polypeptide 3 |
-0.64 | 0.31 | -0.31 | ||
41 | AT5G49945 | Protein of unknown function (DUF1682) | 0.64 | 0.31 | -0.34 | |||
42 | AT3G53390 | Transducin/WD40 repeat-like superfamily protein | -0.64 | 0.31 | -0.37 | |||
43 | AT5G45110 | NPR1-like protein 3 | ATNPR3, NPR1-like protein 3 | -0.64 | 0.32 | -0.32 | ||
44 | AT5G44350 | ethylene-responsive nuclear protein -related | -0.64 | 0.29 | -0.32 | |||
45 | AT2G03680 | spiral1 | SKU6, SPIRAL1 | 0.63 | 0.32 | -0.3 | ||
46 | AT4G29000 | Tesmin/TSO1-like CXC domain-containing protein | 0.63 | 0.33 | -0.32 | |||
47 | AT1G70560 | tryptophan aminotransferase of Arabidopsis 1 | cytokinin induced root curling 1, SHADE AVOIDANCE 3, tryptophan aminotransferase of Arabidopsis 1, WEAK ETHYLENE INSENSITIVE 8 |
0.63 | 0.34 | -0.32 | ||
48 | AT3G44550 | fatty acid reductase 5 | fatty acid reductase 5 | -0.63 | 0.31 | -0.29 | ||
49 | AT4G28940 | Phosphorylase superfamily protein | -0.63 | 0.33 | -0.32 | |||
50 | AT4G37470 | alpha/beta-Hydrolases superfamily protein | 0.63 | 0.31 | -0.31 | |||
51 | AT4G16442 | Uncharacterised protein family (UPF0497) | 0.63 | 0.3 | -0.31 | |||
52 | AT5G04020 | calmodulin binding | -0.63 | 0.32 | -0.28 | |||
53 | AT2G30650 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
0.63 | 0.29 | -0.31 | |||
54 | AT2G42360 | RING/U-box superfamily protein | -0.62 | 0.33 | -0.33 | |||
55 | AT1G30300 | Metallo-hydrolase/oxidoreductase superfamily protein | -0.62 | 0.31 | -0.29 | |||
56 | AT4G34310 | alpha/beta-Hydrolases superfamily protein | -0.62 | 0.32 | -0.34 | |||
57 | AT3G01490 | Protein kinase superfamily protein | 0.62 | 0.31 | -0.32 | |||
58 | AT1G66160 | CYS, MET, PRO, and GLY protein 1 | ATCMPG1, CYS, MET, PRO, and GLY protein 1 |
-0.62 | 0.32 | -0.31 | ||
59 | AT2G30040 | mitogen-activated protein kinase kinase kinase 14 | mitogen-activated protein kinase kinase kinase 14 |
-0.62 | 0.31 | -0.33 | ||
60 | AT4G37010 | centrin 2 | centrin 2 | -0.62 | 0.33 | -0.31 | ||
61 | AT2G27080 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.62 | 0.31 | -0.29 | |||
62 | AT1G66220 | Subtilase family protein | 0.62 | 0.32 | -0.3 | |||
63 | AT3G11340 | UDP-Glycosyltransferase superfamily protein | UDP-dependent glycosyltransferase 76B1 |
-0.62 | 0.3 | -0.31 | ||
64 | AT1G08970 | nuclear factor Y, subunit C9 | HEME ACTIVATED PROTEIN 5C, nuclear factor Y, subunit C9 |
0.62 | 0.35 | -0.32 | ||
65 | AT5G67160 | HXXXD-type acyl-transferase family protein | ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 |
-0.62 | 0.33 | -0.3 | ||
66 | AT2G41640 | Glycosyltransferase family 61 protein | -0.61 | 0.33 | -0.31 | |||
67 | AT5G12390 | Tetratricopeptide repeat (TPR)-like superfamily protein | FISSION 1B | -0.61 | 0.32 | -0.32 | ||
68 | AT4G11090 | TRICHOME BIREFRINGENCE-LIKE 23 | TRICHOME BIREFRINGENCE-LIKE 23 | 0.61 | 0.33 | -0.31 | ||
69 | AT5G10550 | global transcription factor group E2 | global transcription factor group E2 |
0.61 | 0.31 | -0.3 | ||
70 | AT5G04120 | Phosphoglycerate mutase family protein | -0.61 | 0.33 | -0.3 | |||
71 | AT1G32680 | transposable element gene | 0.61 | 0.31 | -0.3 | |||
72 | AT4G23440 | Disease resistance protein (TIR-NBS class) | 0.61 | 0.31 | -0.31 | |||
73 | AT3G18910 | EIN2 targeting protein2 | EIN2 targeting protein2 | 0.61 | 0.31 | -0.3 | ||
74 | AT1G64590 | NAD(P)-binding Rossmann-fold superfamily protein | -0.6 | 0.3 | -0.31 | |||
75 | AT2G45930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to 161 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.32 | |||
76 | AT3G27960 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.59 | 0.3 | -0.31 | |||
77 | AT1G26900 | Pentatricopeptide repeat (PPR) superfamily protein | -0.59 | 0.34 | -0.31 | |||
78 | AT1G03410 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
2A6 | -0.59 | 0.3 | -0.32 | ||
79 | AT3G04370 | plasmodesmata-located protein 4 | plasmodesmata-located protein 4 | -0.59 | 0.34 | -0.32 | ||
80 | AT3G27810 | myb domain protein 21 | myb domain protein 21, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, myb domain protein 21 |
-0.59 | 0.3 | -0.33 | ||
81 | AT1G70740 | Protein kinase superfamily protein | -0.59 | 0.32 | -0.32 | |||
82 | AT2G15240 | UNC-50 family protein | -0.58 | 0.31 | -0.33 | |||
83 | AT4G21230 | cysteine-rich RLK (RECEPTOR-like protein kinase) 27 | cysteine-rich RLK (RECEPTOR-like protein kinase) 27 |
-0.58 | 0.32 | -0.32 | ||
84 | AT1G53165 | Protein kinase superfamily protein | ATMAP4K ALPHA1 | -0.58 | 0.33 | -0.3 | ||
85 | AT1G22810 | Integrase-type DNA-binding superfamily protein | -0.58 | 0.29 | -0.33 | |||
86 | AT5G44570 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, hypocotyl, sepal, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage, LP.08 eight leaves visible; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.34 | -0.3 | |||
87 | AT4G11170 | Disease resistance protein (TIR-NBS-LRR class) family | -0.58 | 0.28 | -0.31 | |||
88 | AT3G54610 | histone acetyltransferase of the GNAT family 1 | BIG TOP, general control non-repressible 5, HAC3, HAG01, histone acetyltransferase of the GNAT family 1, HISTONE ACETYLTRANSFERASE 1 |
-0.58 | 0.32 | -0.32 | ||
89 | AT5G05980 | DHFS-FPGS homolog B | DHFS-FPGS homolog B, DHFS-FPGS homolog B, folylpolyglutamate synthetase 1 |
-0.58 | 0.3 | -0.31 | ||
90 | AT3G28890 | receptor like protein 43 | receptor like protein 43, receptor like protein 43 |
-0.57 | 0.3 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
91 | C0134 | Kaempferol-7-O-neohesperidoside | - | - | - | 0.78 | 0.42 | -0.44 | ||
92 | C0008 | γ-Aminobutyric acid | - | 4-Aminobutyrate | glutamate degradation IV, 4-aminobutyrate degradation IV, putrescine degradation IV |
-0.61 | 0.32 | -0.32 |