AT3G27400 : -
Query Information
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AGICode AT3G27400
Description Pectin lyase-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G27400 Pectin lyase-like superfamily protein 1 0.33 -0.32
2 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 0.84 0.31 -0.3
3 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC -0.82 0.32 -0.32
4 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 -0.81 0.33 -0.33
5 AT4G39320 microtubule-associated protein-related 0.79 0.31 -0.31
6 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 -0.78 0.3 -0.32
7 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 0.78 0.31 -0.31
8 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 -0.76 0.31 -0.31
9 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.76 0.31 -0.32
10 AT3G25100 cell division cycle 45 cell division cycle 45 0.76 0.33 -0.3
11 AT1G50030 target of rapamycin target of rapamycin -0.76 0.31 -0.33
12 AT5G27720 Small nuclear ribonucleoprotein family protein embryo defective 1644, SM-like
protein 4		 0.75 0.32 -0.31
13 AT4G11380 Adaptin family protein -0.75 0.32 -0.31
14 AT5G59580 UDP-glucosyl transferase 76E1 UDP-glucosyl transferase 76E1 -0.75 0.31 -0.33
15 AT2G36570 Leucine-rich repeat protein kinase family protein 0.75 0.3 -0.33
16 AT5G05570 transducin family protein / WD-40 repeat family protein -0.74 0.3 -0.27
17 AT1G68820 Transmembrane Fragile-X-F-associated protein -0.74 0.3 -0.3
18 AT5G43190 Galactose oxidase/kelch repeat superfamily protein -0.74 0.3 -0.29
19 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 -0.74 0.32 -0.32
20 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 -0.74 0.3 -0.31
21 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein 0.73 0.32 -0.32
22 AT2G45820 Remorin family protein 0.73 0.32 -0.33
23 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B
protein		 -0.73 0.31 -0.31
24 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 -0.72 0.32 -0.3
25 AT5G51950 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 0.72 0.33 -0.31
26 AT5G60160 Zn-dependent exopeptidases superfamily protein -0.72 0.32 -0.29
27 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h -0.72 0.3 -0.32
28 AT1G78290 Protein kinase superfamily protein SNF1-RELATED PROTEIN KINASE 2-8,
SNF1-RELATED PROTEIN KINASE 2.8,
SNF1-RELATED PROTEIN KINASE 2C		 0.72 0.3 -0.3
29 AT4G13345 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 maternal effect embryo arrest 55 -0.72 0.32 -0.31
30 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 -0.71 0.31 -0.31
31 AT3G19450 GroES-like zinc-binding alcohol dehydrogenase family
protein		 ATCAD4, CAD, CAD-C, CINNAMYL
ALCOHOL DEHYDROGENASE 4		 0.71 0.31 -0.32
32 AT5G48800 Phototropic-responsive NPH3 family protein 0.71 0.32 -0.32
33 AT5G65620 Zincin-like metalloproteases family protein -0.71 0.31 -0.32
34 AT2G20010 Protein of unknown function (DUF810) -0.71 0.3 -0.33
35 AT2G15900 Phox-associated domain;Phox-like;Sorting nexin, C-terminal -0.71 0.31 -0.33
36 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 -0.71 0.33 -0.31
37 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 -0.71 0.3 -0.32
38 AT1G78530 Protein kinase superfamily protein 0.7 0.3 -0.29
39 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 -0.69 0.31 -0.31
40 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.32 -0.3
41 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.69 0.32 -0.31
42 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 -0.69 0.3 -0.32
43 AT1G70750 Protein of unknown function, DUF593 -0.69 0.3 -0.3
44 AT1G72230 Cupredoxin superfamily protein 0.69 0.31 -0.31
45 AT1G29660 GDSL-like Lipase/Acylhydrolase superfamily protein 0.68 0.32 -0.32
46 AT5G40210 nodulin MtN21 /EamA-like transporter family protein -0.68 0.31 -0.33
47 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS 0.68 0.31 -0.33
48 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein -0.67 0.34 -0.32
49 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.67 0.33 -0.29
50 AT1G70720 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.67 0.32 -0.32
51 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 -0.67 0.32 -0.31
52 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 -0.67 0.31 -0.31
53 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 0.67 0.32 -0.31
54 AT5G19860 Protein of unknown function, DUF538 -0.67 0.31 -0.28
55 AT1G71530 Protein kinase superfamily protein -0.67 0.32 -0.31
56 AT3G03570 Protein of unknown function (DUF3550/UPF0682) -0.67 0.3 -0.3
57 AT5G55860 Plant protein of unknown function (DUF827) -0.67 0.32 -0.29
58 AT3G51460 Phosphoinositide phosphatase family protein ROOT HAIR DEFECTIVE4 -0.67 0.32 -0.33
59 AT4G29940 pathogenesis related homeodomain protein A pathogenesis related homeodomain
protein A		 -0.67 0.32 -0.32
60 AT1G34065 S-adenosylmethionine carrier 2 S-adenosylmethionine carrier 2 0.66 0.28 -0.33
61 AT5G18770 F-box/FBD-like domains containing protein 0.66 0.32 -0.36
62 AT1G67320 DNA primase, large subunit family EMBRYO DEFECTIVE 2813 0.66 0.32 -0.33
63 AT1G32480 isocitrate dehydrogenase IV isocitrate dehydrogenase IV -0.66 0.33 -0.3
64 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 -0.66 0.32 -0.34
65 AT5G06260 TLD-domain containing nucleolar protein -0.66 0.32 -0.33
66 AT5G47480 RGPR-related -0.66 0.32 -0.32
67 AT5G43560 TRAF-like superfamily protein -0.66 0.32 -0.32
68 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 0.66 0.32 -0.31
69 AT1G80950 Phospholipid/glycerol acyltransferase family protein -0.66 0.31 -0.33
70 AT1G68810 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.66 0.33 -0.31
71 AT3G21640 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 ATFKBP42, FK506-BINDING PROTEIN
42, TWISTED DWARF 1, ULTRACURVATA
2		 0.65 0.34 -0.29
72 AT3G26320 cytochrome P450, family 71, subfamily B, polypeptide 36 cytochrome P450, family 71,
subfamily B, polypeptide 36		 0.65 0.31 -0.3
73 AT5G64720 Protein of unknown function (DUF1278) 0.65 0.31 -0.32
74 AT2G23230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.65 0.33 -0.33
75 AT5G02220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.32 -0.31
76 AT5G03970 F-box associated ubiquitination effector family protein 0.64 0.32 -0.34
77 AT5G44010 unknown protein; Has 28 Blast hits to 26 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.32 -0.3
78 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 0.64 0.33 -0.33
79 AT5G15460 membrane-anchored ubiquitin-fold protein 2 membrane-anchored ubiquitin-fold
protein 2		 0.64 0.3 -0.34
80 AT5G41000 YELLOW STRIPE like 4 YELLOW STRIPE like 4 0.63 0.31 -0.33
81 AT4G01390 TRAF-like family protein 0.62 0.35 -0.32
82 AT1G08090 nitrate transporter 2:1 ACH1, NITRATE TRANSPORTER 2.1,
nitrate transporter 2:1, LATERAL
ROOT INITIATION 1, NITRATE
TRANSPORTER 2, NITRATE TRANSPORTER
2.1, nitrate transporter 2:1,
NRT2;1AT		 0.62 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.82 0.41 -0.45 C0067