AT3G18710 : ARABIDOPSIS THALIANA PLANT U-BOX 29
Query Information
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AGICode AT3G18710
Description plant U-box 29
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 1 0.33 -0.33
2 AT2G17040 NAC domain containing protein 36 NAC domain containing protein 36,
NAC domain containing protein 36		 0.74 0.3 -0.34
3 AT3G44940 Protein of unknown function (DUF1635) 0.74 0.31 -0.31
4 AT4G39570 Galactose oxidase/kelch repeat superfamily protein 0.72 0.31 -0.3
5 AT2G32010 CVP2 like 1 CVP2 like 1 0.72 0.31 -0.32
6 AT4G03020 transducin family protein / WD-40 repeat family protein -0.71 0.31 -0.31
7 AT1G80520 Sterile alpha motif (SAM) domain-containing protein 0.7 0.31 -0.33
8 AT1G21750 PDI-like 1-1 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 5, PDI-like
1-1, PROTEIN DISULFIDE ISOMERASE
5, PDI-like 1-1		 -0.7 0.32 -0.31
9 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 -0.69 0.32 -0.31
10 AT5G65720 nitrogen fixation S (NIFS)-like 1 ARABIDOPSIS THALIANA NITROGEN
FIXATION S (NIFS)-LIKE 1, NITROGEN
FIXATION S HOMOLOG 1, nitrogen
fixation S (NIFS)-like 1, NITROGEN
FIXATION S HOMOLOG 1		 -0.69 0.3 -0.3
11 AT4G27500 proton pump interactor 1 proton pump interactor 1 -0.69 0.31 -0.32
12 AT5G11210 glutamate receptor 2.5 ARABIDOPSIS THALIANA GLU,
glutamate receptor 2.5		 -0.68 0.33 -0.3
13 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.31 -0.31
14 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 0.68 0.3 -0.31
15 AT1G20630 catalase 1 catalase 1 -0.68 0.3 -0.31
16 AT2G20410 RNA-binding ASCH domain protein -0.68 0.3 -0.32
17 AT3G56430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in
196 species: Archae - 12; Bacteria - 170; Metazoa - 996;
Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes -
1428 (source: NCBI BLink).		 -0.68 0.32 -0.32
18 AT1G67960 CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV
receptor (InterPro:IPR008010); Has 447 Blast hits to 428
proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa
- 190; Fungi - 133; Plants - 49; Viruses - 0; Other
Eukaryotes - 75 (source: NCBI BLink).		 POLLEN DEFECTIVE IN GUIDANCE 1 -0.67 0.32 -0.32
19 AT4G19660 NPR1-like protein 4 ATNPR4, NPR1-like protein 4 0.67 0.3 -0.29
20 AT1G53570 mitogen-activated protein kinase kinase kinase 3 mitogen-activated protein kinase
kinase kinase 3, MAP KINASE KINASE
KINASE 3		 -0.67 0.31 -0.3
21 AT2G26190 calmodulin-binding family protein 0.67 0.31 -0.34
22 AT5G59080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G46880.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.67 0.31 -0.33
23 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein 0.66 0.32 -0.32
24 AT4G25490 C-repeat/DRE binding factor 1 ATCBF1, C-repeat/DRE binding
factor 1, DRE BINDING PROTEIN 1B		 0.66 0.29 -0.31
25 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 -0.66 0.31 -0.32
26 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain -0.66 0.31 -0.3
27 AT4G32640 Sec23/Sec24 protein transport family protein -0.66 0.33 -0.31
28 AT3G60380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in
424 species: Archae - 6; Bacteria - 372; Metazoa - 2603;
Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes -
2147 (source: NCBI BLink).		 0.66 0.32 -0.33
29 AT3G02420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0121
(InterPro:IPR005344); Has 72 Blast hits to 71 proteins in
25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.65 0.32 -0.31
30 AT5G64440 fatty acid amide hydrolase fatty acid amide hydrolase, fatty
acid amide hydrolase		 -0.65 0.31 -0.32
31 AT5G54780 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.65 0.31 -0.29
32 AT5G09400 K+ uptake permease 7 K+ uptake permease 7 -0.65 0.32 -0.31
33 AT1G74790 catalytics -0.65 0.29 -0.3
34 AT3G13360 WPP domain interacting protein 3 WPP domain interacting protein 3 0.65 0.32 -0.31
35 AT1G43160 related to AP2 6 related to AP2 6 -0.64 0.3 -0.3
36 AT1G27285 transposable element gene 0.64 0.31 -0.31
37 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 0.64 0.31 -0.3
38 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 -0.64 0.33 -0.33
39 AT4G03320 translocon at the inner envelope membrane of chloroplasts
20-IV		 translocon at the inner envelope
membrane of chloroplasts 20-IV,
translocon at the inner envelope
membrane of chloroplasts 20-IV		 -0.64 0.3 -0.34
40 AT3G60980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.31 -0.3
41 AT1G20640 Plant regulator RWP-RK family protein 0.63 0.32 -0.31
42 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 -0.63 0.32 -0.34
43 AT4G21200 gibberellin 2-oxidase 8 ARABIDOPSIS THALIANA GIBBERELLIN
2-OXIDASE 8, gibberellin 2-oxidase
8		 -0.63 0.3 -0.3
44 AT5G58410 HEAT/U-box domain-containing protein -0.63 0.33 -0.32
45 AT1G69230 SPIRAL1-like2 SPIRAL1-like2 0.63 0.3 -0.34
46 AT4G13250 NAD(P)-binding Rossmann-fold superfamily protein NON-YELLOW COLORING 1 -0.63 0.3 -0.3
47 AT2G01660 plasmodesmata-located protein 6 plasmodesmata-located protein 6 0.63 0.31 -0.31
48 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 -0.62 0.3 -0.32
49 AT4G24550 Clathrin adaptor complexes medium subunit family protein -0.62 0.31 -0.31
50 AT1G10730 Clathrin adaptor complexes medium subunit family protein -0.62 0.31 -0.3
51 AT2G45210 SAUR-like auxin-responsive protein family -0.62 0.29 -0.3
52 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 -0.62 0.32 -0.3
53 AT3G43520 Transmembrane proteins 14C -0.62 0.33 -0.31
54 AT3G50060 myb domain protein 77 myb domain protein 77 0.62 0.33 -0.32
55 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 -0.62 0.29 -0.3
56 AT3G06540 Rab escort protein AthREP, Rab escort protein -0.62 0.33 -0.3
57 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.62 0.32 -0.31
58 AT4G21105 cytochrome-c oxidases;electron carriers -0.61 0.31 -0.32
59 AT1G59620 Disease resistance protein (CC-NBS-LRR class) family CW9 0.61 0.31 -0.32
60 AT2G40280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.31 -0.31
61 AT5G49690 UDP-Glycosyltransferase superfamily protein -0.61 0.3 -0.3
62 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 -0.61 0.31 -0.32
63 AT1G49780 plant U-box 26 plant U-box 26 0.61 0.32 -0.33
64 AT3G47930 L-galactono-1,4-lactone dehydrogenase L-galactono-1,4-lactone
dehydrogenase,
L-galactono-1,4-lactone
dehydrogenase		 -0.6 0.32 -0.32
65 AT1G73540 nudix hydrolase homolog 21 nudix hydrolase homolog 21, nudix
hydrolase homolog 21		 0.6 0.32 -0.3
66 AT2G35480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G32260.1); Has 47 Blast
hits to 47 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.34 -0.28
67 AT1G47410 unknown protein; Has 26 Blast hits to 26 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.3 -0.31
68 AT5G58710 rotamase CYP 7 rotamase CYP 7 -0.6 0.31 -0.32
69 AT5G60640 PDI-like 1-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 2, PDI-like
1-4, PROTEIN DISULFIDE ISOMERASE
2, PDI-like 1-4		 -0.6 0.33 -0.3
70 AT5G19240 Glycoprotein membrane precursor GPI-anchored 0.6 0.31 -0.31
71 AT5G38830 Cysteinyl-tRNA synthetase, class Ia family protein -0.6 0.31 -0.32
72 AT5G17190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.35 -0.32
73 AT2G15740 C2H2-like zinc finger protein 0.59 0.34 -0.31
74 AT4G23496 SPIRAL1-like5 SPIRAL1-like5 0.59 0.31 -0.33
75 AT3G06080 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 10 0.58 0.32 -0.31
76 AT4G36550 ARM repeat superfamily protein 0.58 0.32 -0.32
77 AT1G22190 Integrase-type DNA-binding superfamily protein related to AP2 4 0.58 0.29 -0.31
78 AT4G13760 Pectin lyase-like superfamily protein 0.58 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.76 0.46 -0.45 C0010
80 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.75 0.46 -0.45 C0003