AT3G23060 : -
Query Information
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AGICode AT3G23060
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G23060 RING/U-box superfamily protein 1 0.32 -0.3
2 AT5G11460 Protein of unknown function (DUF581) -0.74 0.33 -0.29
3 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein 0.72 0.32 -0.32
4 AT1G69800 Cystathionine beta-synthase (CBS) protein -0.7 0.31 -0.32
5 AT1G53930 Ubiquitin-like superfamily protein -0.7 0.29 -0.34
6 AT5G55600 agenet domain-containing protein / bromo-adjacent homology
(BAH) domain-containing protein		 0.69 0.32 -0.3
7 AT1G01410 pumilio 22 pumilio 22, pumilio 22 0.68 0.31 -0.32
8 AT4G31000 Calmodulin-binding protein 0.67 0.32 -0.32
9 AT4G12690 Plant protein of unknown function (DUF868) -0.67 0.32 -0.32
10 AT5G15700 DNA/RNA polymerases superfamily protein 0.66 0.31 -0.33
11 AT4G36700 RmlC-like cupins superfamily protein -0.66 0.31 -0.32
12 AT5G47390 myb-like transcription factor family protein -0.66 0.33 -0.31
13 AT1G74370 RING/U-box superfamily protein -0.66 0.32 -0.29
14 AT1G19000 Homeodomain-like superfamily protein -0.65 0.33 -0.31
15 AT5G35100 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.65 0.31 -0.29
16 AT4G02550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits
to 300 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 0.65 0.29 -0.31
17 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.35
18 AT1G62260 mitochondrial editing factor 9 mitochondrial editing factor 9 0.64 0.29 -0.31
19 AT5G65170 VQ motif-containing protein 0.64 0.3 -0.32
20 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.63 0.3 -0.32
21 AT3G05520 Subunits of heterodimeric actin filament capping protein
Capz superfamily		 -0.63 0.3 -0.31
22 AT3G04310 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.33
23 AT5G22400 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.62 0.33 -0.32
24 AT3G52230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast outer membrane, chloroplast thylakoid membrane,
chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 29
Blast hits to 29 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.3
25 AT3G25080 Protein of unknown function (DUF626) 0.62 0.31 -0.33
26 AT1G04000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits
to 62 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.32
27 AT4G07920 transposable element gene -0.62 0.31 -0.31
28 AT1G12180 BEST Arabidopsis thaliana protein match is: HSP20-like
chaperones superfamily protein (TAIR:AT5G47600.1); Has 8
Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.33 -0.3
29 AT2G26340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast thylakoid
lumen, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38
proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.32 -0.32
30 AT3G27320 alpha/beta-Hydrolases superfamily protein -0.61 0.32 -0.33
31 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 0.61 0.32 -0.32
32 AT4G25570 Cytochrome b561/ferric reductase transmembrane protein
family		 ACYB-2 -0.6 0.31 -0.32
33 AT5G39080 HXXXD-type acyl-transferase family protein -0.6 0.31 -0.3
34 AT2G01090 Ubiquinol-cytochrome C reductase hinge protein -0.6 0.32 -0.31
35 AT5G08340 Nucleotidylyl transferase superfamily protein -0.6 0.31 -0.33
36 AT4G10910 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.31 -0.29
37 AT4G04860 DERLIN-2.2 DERLIN-2.2 0.59 0.32 -0.33
38 AT2G17450 RING-H2 finger A3A RING-H2 finger A3A -0.59 0.3 -0.32
39 AT4G07450 transposable element gene -0.59 0.33 -0.32
40 AT2G47700 RING/U-box superfamily protein RED AND FAR-RED INSENSITIVE 2 -0.59 0.32 -0.33
41 AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein -0.59 0.32 -0.31
42 AT3G09405 Pectinacetylesterase family protein 0.59 0.3 -0.3
43 AT4G32540 Flavin-binding monooxygenase family protein YUCCA, YUCCA 1 -0.59 0.31 -0.33
44 AT1G11560 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.59 0.31 -0.32
45 AT5G09640 serine carboxypeptidase-like 19 serine carboxypeptidase-like 19,
SINAPOYLGLUCOSE ACCUMULATOR 2		 -0.59 0.29 -0.37
46 AT1G09440 Protein kinase superfamily protein -0.59 0.32 -0.32
47 AT2G45960 plasma membrane intrinsic protein 1B ATHH2, NAMED PLASMA MEMBRANE
INTRINSIC PROTEIN 1;2, plasma
membrane intrinsic protein 1B,
TRANSMEMBRANE PROTEIN A		 -0.58 0.32 -0.32
48 AT3G50720 Protein kinase superfamily protein -0.58 0.33 -0.31
49 AT5G54540 Uncharacterised conserved protein (UCP012943) -0.58 0.32 -0.31
50 AT4G29120 6-phosphogluconate dehydrogenase family protein -0.58 0.3 -0.29
51 AT2G26870 non-specific phospholipase C2 non-specific phospholipase C2 -0.58 0.3 -0.33
52 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 -0.58 0.35 -0.33
53 AT3G30240 transposable element gene -0.57 0.31 -0.31
54 AT4G39160 Homeodomain-like superfamily protein 0.57 0.33 -0.33
55 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 -0.57 0.3 -0.3
56 AT3G06470 GNS1/SUR4 membrane protein family -0.57 0.34 -0.31
57 AT2G38300 myb-like HTH transcriptional regulator family protein 0.57 0.3 -0.3
58 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH -0.56 0.31 -0.3
59 AT1G78160 pumilio 7 pumilio 7, pumilio 7 -0.56 0.3 -0.34
60 AT4G33580 beta carbonic anhydrase 5 A. THALIANA BETA CARBONIC
ANHYDRASE 5, beta carbonic
anhydrase 5		 -0.56 0.31 -0.33
61 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.56 0.3 -0.32
62 AT1G34000 one-helix protein 2 one-helix protein 2 -0.56 0.31 -0.3
63 AT1G71090 Auxin efflux carrier family protein -0.56 0.32 -0.31
64 AT5G60680 Protein of unknown function, DUF584 -0.56 0.31 -0.34
65 AT1G29020 Calcium-binding EF-hand family protein 0.56 0.32 -0.31
66 AT4G32730 Homeodomain-like protein ATMYB3R-1, ARABIDOOSIS THALIANA
MYB DOMAIN PROTEIN 3R1, MYB DOMAIN
PROTEIN 3R1, C-MYB-LIKE
TRANSCRIPTION FACTOR 3R-1, PC-MYB1		 0.55 0.32 -0.33
67 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 0.55 0.32 -0.31
68 AT2G14800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other
Eukaryotes - 16 (source: NCBI BLink).		 0.55 0.35 -0.33
69 AT4G15010 Mitochondrial substrate carrier family protein 0.54 0.32 -0.28
70 AT4G22020 pseudogene, hypothetical protein, similar to
uncharacterized glycine-rich protein (GI:7269047)
{Arabidopsis thaliana}		 0.54 0.31 -0.32
71 AT4G28090 SKU5 similar 10 SKU5 similar 10 0.54 0.3 -0.3
72 AT5G14770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.53 0.33 -0.31
73 AT5G63940 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.53 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
74 C0188 Nicotine (-)-Nicotine Nicotine - 0.79 0.48 -0.47 C0188
75 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		-0.66 0.44 -0.43 C0108