AT3G27090 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G27090
Description DCD (Development and Cell Death) domain protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G27090 DCD (Development and Cell Death) domain protein 1 0.32 -0.32
2 AT1G08480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED
IN: 27 plant structures; EXPRESSED DURING: 15 growth
stages; Has 39 Blast hits to 39 proteins in 13 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
succinate dehydrogenase 6 0.71 0.3 -0.29
3 AT1G25580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein
Arabidopsis NAC domain containing
protein 8, SUPPRESSOR OF GAMMA
RADIATION 1
-0.69 0.35 -0.32
4 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.33 -0.3
5 AT3G61160 Protein kinase superfamily protein -0.69 0.33 -0.33
6 AT5G04260 WCRKC thioredoxin 2 WCRKC thioredoxin 2 0.69 0.31 -0.31
7 AT1G43130 like COV 2 like COV 2 0.68 0.31 -0.32
8 AT2G10950 BSD domain-containing protein 0.68 0.31 -0.3
9 AT1G05570 callose synthase 1 ATGSL06, ATGSL6, callose synthase
1, GSL06, GLUCAN SYNTHASE-LIKE 6
-0.68 0.33 -0.35
10 AT1G76200 unknown protein; Has 96 Blast hits to 96 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47;
Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source:
NCBI BLink).
0.68 0.3 -0.3
11 AT3G62880 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein
ATOEP16-4 0.67 0.31 -0.31
12 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.67 0.31 -0.34
13 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
caffeoyl coenzyme A
O-methyltransferase 1
0.67 0.33 -0.35
14 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 0.67 0.31 -0.31
15 AT5G48930 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl
transferase
hydroxycinnamoyl-CoA
shikimate/quinate hydroxycinnamoyl
transferase
0.67 0.31 -0.33
16 AT5G03080 Phosphatidic acid phosphatase (PAP2) family protein 0.67 0.31 -0.3
17 AT3G13200 Cwf15 / Cwc15 cell cycle control family protein EMBRYO DEFECTIVE 2769 0.66 0.31 -0.33
18 AT1G55300 TBP-associated factor 7 TBP-associated factor 7 0.66 0.33 -0.32
19 AT2G36060 MMS ZWEI homologue 3 MMS ZWEI homologue 3, UBIQUITIN E2
VARIANT 1C
0.65 0.33 -0.3
20 AT5G64180 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.65 0.31 -0.3
21 AT3G24210 Ankyrin repeat family protein -0.65 0.31 -0.29
22 AT3G63360 defensin-related -0.64 0.34 -0.32
23 AT1G69800 Cystathionine beta-synthase (CBS) protein 0.64 0.33 -0.32
24 AT3G48070 RING/U-box superfamily protein 0.64 0.31 -0.33
25 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).
0.64 0.32 -0.32
26 AT5G58970 uncoupling protein 2 uncoupling protein 2, uncoupling
protein 2
0.64 0.32 -0.32
27 AT1G23210 glycosyl hydrolase 9B6 glycosyl hydrolase 9B6, glycosyl
hydrolase 9B6
-0.64 0.32 -0.31
28 AT2G04500 Cysteine/Histidine-rich C1 domain family protein -0.63 0.32 -0.3
29 AT1G23160 Auxin-responsive GH3 family protein -0.63 0.33 -0.33
30 AT1G12180 BEST Arabidopsis thaliana protein match is: HSP20-like
chaperones superfamily protein (TAIR:AT5G47600.1); Has 8
Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.63 0.32 -0.32
31 AT3G06350 dehydroquinate dehydratase, putative / shikimate
dehydrogenase, putative
EMBRYO DEFECTIVE 3004, MATERNAL
EFFECT EMBRYO ARREST 32
0.62 0.34 -0.33
32 AT1G71740 unknown protein; Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.62 0.31 -0.29
33 AT1G02475 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
0.62 0.31 -0.32
34 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).
0.62 0.31 -0.31
35 AT2G06150 transposable element gene -0.61 0.35 -0.31
36 AT1G28540 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.61 0.32 -0.34
37 AT1G06930 unknown protein; Has 4478 Blast hits to 355 proteins in 82
species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi -
125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800
(source: NCBI BLink).
-0.61 0.33 -0.31
38 AT1G12230 Aldolase superfamily protein 0.61 0.3 -0.31
39 AT2G30210 laccase 3 laccase 3 -0.61 0.31 -0.33
40 AT1G79160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits
to 102 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.61 0.32 -0.32
41 AT1G71692 AGAMOUS-like 12 AGAMOUS-like 12, XAANTAL1 -0.61 0.33 -0.32
42 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein
-0.61 0.3 -0.29
43 AT5G27670 histone H2A 7 histone H2A 7 0.6 0.33 -0.29
44 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 0.6 0.32 -0.31
45 AT2G39230 LATERAL ORGAN JUNCTION LATERAL ORGAN JUNCTION -0.6 0.31 -0.32
46 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2
-0.6 0.32 -0.33
47 AT3G47590 alpha/beta-Hydrolases superfamily protein 0.59 0.32 -0.32
48 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2
0.59 0.31 -0.31
49 AT5G59610 Chaperone DnaJ-domain superfamily protein 0.59 0.31 -0.3
50 AT2G39590 Ribosomal protein S8 family protein 0.59 0.31 -0.33
51 AT5G65960 GTP binding 0.59 0.29 -0.32
52 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 0.59 0.34 -0.34
53 AT4G19130 Replication factor-A protein 1-related -0.59 0.29 -0.3
54 AT4G04500 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like
protein kinase) 37
-0.59 0.32 -0.31
55 AT2G15110 Protein of unknown function, DUF601 0.58 0.31 -0.32
56 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2
0.58 0.32 -0.31
57 AT3G14410 Nucleotide/sugar transporter family protein 0.58 0.33 -0.34
58 AT3G57790 Pectin lyase-like superfamily protein 0.58 0.31 -0.29
59 AT2G24930 transposable element gene 0.58 0.34 -0.32
60 AT3G30370 CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant
(InterPro:IPR004332); BEST Arabidopsis thaliana protein
match is: SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein (TAIR:AT1G18050.1);
Has 35 Blast hits to 35 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.57 0.31 -0.31
61 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 0.57 0.3 -0.32
62 AT4G37730 basic leucine-zipper 7 basic leucine-zipper 7, basic
leucine-zipper 7
-0.57 0.32 -0.3
63 AT1G22080 Cysteine proteinases superfamily protein 0.57 0.3 -0.29
64 AT4G26320 arabinogalactan protein 13 arabinogalactan protein 13 -0.57 0.31 -0.29
65 AT2G30380 Plant protein of unknown function (DUF641) -0.57 0.34 -0.3
66 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90
-0.57 0.32 -0.32
67 AT4G01530 transposable element gene 0.57 0.31 -0.32
68 AT1G03980 phytochelatin synthase 2 phytochelatin synthase 2,
phytochelatin synthase 2
-0.57 0.31 -0.32
69 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 -0.57 0.3 -0.32
70 AT1G50080 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT1G60720.1); Has 42 Blast hits to 42
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.57 0.3 -0.31
71 AT1G41870 transposable element gene -0.57 0.33 -0.3
72 AT2G47310 flowering time control protein-related / FCA gamma-related 0.57 0.32 -0.31
73 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.31 -0.32
74 AT1G73780 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.56 0.32 -0.3
75 AT5G51470 Auxin-responsive GH3 family protein -0.56 0.29 -0.31
76 AT5G14670 ADP-ribosylation factor A1B ADP-ribosylation factor A1B,
ADP-ribosylation factor A1B
-0.56 0.31 -0.3
77 AT3G24780 Uncharacterised conserved protein UCP015417, vWA -0.56 0.31 -0.31
78 AT3G29420 geranylgeranyl pyrophosphate synthase-related / GGPP
synthetase-related / farnesyltranstransferase-related
-0.56 0.32 -0.35
79 AT1G54370 sodium hydrogen exchanger 5 NA+/H+ ANTIPORTER 5, sodium
hydrogen exchanger 5
-0.56 0.33 -0.33
80 AT2G33490 hydroxyproline-rich glycoprotein family protein -0.56 0.32 -0.32
81 AT5G44770 Cysteine/Histidine-rich C1 domain family protein -0.54 0.32 -0.31
82 AT2G48080 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.54 0.3 -0.31
83 AT1G52150 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein
ATHB-15, ATHB15, CORONA, INCURVATA
4
-0.54 0.33 -0.33
84 AT2G01950 BRI1-like 2 BRI1-like 2, VASCULAR HIGHWAY 1 -0.54 0.32 -0.3
85 AT4G33160 F-box family protein -0.53 0.3 -0.32
86 AT5G20390 Glycosyl hydrolase superfamily protein -0.53 0.32 -0.33
87 AT3G46710 NB-ARC domain-containing disease resistance protein -0.53 0.31 -0.32
88 AT1G12220 Disease resistance protein (CC-NBS-LRR class) family RESISTANT TO P. SYRINGAE 5 -0.53 0.32 -0.31
89 AT2G28890 poltergeist like 4 poltergeist like 4 -0.53 0.32 -0.3
90 AT4G03740 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
-0.53 0.34 -0.32
91 AT3G46770 AP2/B3-like transcriptional factor family protein -0.53 0.3 -0.32
92 AT5G09730 beta-xylosidase 3 ATBX3, BETA-XYLOSIDASE 3, BX3,
beta-xylosidase 3, XYL3
-0.53 0.31 -0.32
93 AT3G13730 cytochrome P450, family 90, subfamily D, polypeptide 1 cytochrome P450, family 90,
subfamily D, polypeptide 1
-0.53 0.32 -0.31
94 AT4G12380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.53 0.29 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0147 Mannose D-Mannose D-Mannose mannose degradation,
mannitol degradation II
0.67 0.3 -0.32 C0147
96 C0181 MST_2904.3 - - - -0.62 0.47 -0.44