AGICode | AT3G27080 |
Description | translocase of outer membrane 20 kDa subunit 3 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G27080 | translocase of outer membrane 20 kDa subunit 3 | translocase of outer membrane 20 kDa subunit 3 |
1 | 0.31 | -0.32 | ||
2 | AT3G53020 | Ribosomal protein L24e family protein | RIBOSOMAL PROTEIN L24, RPL24B, SHORT VALVE1 |
0.91 | 0.31 | -0.34 | ||
3 | AT1G04480 | Ribosomal protein L14p/L23e family protein | 0.9 | 0.3 | -0.32 | |||
4 | AT5G47700 | 60S acidic ribosomal protein family | 0.89 | 0.33 | -0.33 | |||
5 | AT3G09200 | Ribosomal protein L10 family protein | 0.89 | 0.29 | -0.32 | |||
6 | AT4G16720 | Ribosomal protein L23/L15e family protein | 0.88 | 0.33 | -0.32 | |||
7 | AT2G43640 | Signal recognition particle, SRP9/SRP14 subunit | 0.88 | 0.32 | -0.31 | |||
8 | AT5G44130 | FASCICLIN-like arabinogalactan protein 13 precursor | FASCICLIN-like arabinogalactan protein 13 precursor |
0.87 | 0.32 | -0.3 | ||
9 | AT3G43810 | calmodulin 7 | calmodulin 7 | 0.87 | 0.31 | -0.31 | ||
10 | AT2G32060 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.87 | 0.3 | -0.32 | |||
11 | AT5G35620 | Eukaryotic initiation factor 4E protein | EUKARYOTIC INITIATION FACTOR (ISO)4E, EUKARYOTIC TRANSLATION INITATION FACTOR 4E2, eukaryotic translation Initiation Factor isoform 4E, LSP, LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 |
0.86 | 0.3 | -0.32 | ||
12 | AT2G44120 | Ribosomal protein L30/L7 family protein | 0.86 | 0.32 | -0.31 | |||
13 | AT4G25890 | 60S acidic ribosomal protein family | 0.86 | 0.32 | -0.31 | |||
14 | AT1G34030 | Ribosomal protein S13/S18 family | 0.86 | 0.31 | -0.3 | |||
15 | AT2G27720 | 60S acidic ribosomal protein family | 0.86 | 0.32 | -0.31 | |||
16 | AT2G20450 | Ribosomal protein L14 | 0.86 | 0.34 | -0.31 | |||
17 | AT3G46830 | RAB GTPase homolog A2C | ARABIDOPSIS RAB GTPASE HOMOLOG A2C, ATRAB11A, RAB GTPase homolog A2C, RAB GTPASE HOMOLOG A2C, RAB GTPase homolog A2C |
0.86 | 0.3 | -0.34 | ||
18 | AT3G53890 | Ribosomal protein S21e | 0.85 | 0.31 | -0.3 | |||
19 | AT1G67430 | Ribosomal protein L22p/L17e family protein | 0.85 | 0.33 | -0.34 | |||
20 | AT2G36170 | Ubiquitin supergroup;Ribosomal protein L40e | 0.85 | 0.31 | -0.31 | |||
21 | AT2G01250 | Ribosomal protein L30/L7 family protein | 0.85 | 0.31 | -0.31 | |||
22 | AT4G31700 | ribosomal protein S6 | ribosomal protein S6, RPS6A | 0.85 | 0.33 | -0.33 | ||
23 | AT4G09720 | RAB GTPase homolog G3A | RAB GTPase homolog G3A, RAB GTPase homolog G3A |
0.85 | 0.31 | -0.32 | ||
24 | AT2G36620 | ribosomal protein L24 | ribosomal protein L24 | 0.85 | 0.32 | -0.33 | ||
25 | AT1G54690 | gamma histone variant H2AX | GAMMA H2AX, gamma histone variant H2AX, H2AXB, histone H2A 3 |
0.85 | 0.34 | -0.32 | ||
26 | AT5G10360 | Ribosomal protein S6e | embryo defective 3010, Ribosomal protein small subunit 6b |
0.85 | 0.3 | -0.33 | ||
27 | AT2G32380 | Transmembrane protein 97, predicted | 0.85 | 0.32 | -0.32 | |||
28 | AT1G77750 | Ribosomal protein S13/S18 family | 0.85 | 0.31 | -0.29 | |||
29 | AT3G59650 | mitochondrial ribosomal protein L51/S25/CI-B8 family protein |
0.85 | 0.32 | -0.31 | |||
30 | AT1G22920 | COP9 signalosome 5A | ARABIDOPSIS JAB1 HOMOLOG 1, COP9 signalosome 5A, JAB1 |
0.84 | 0.33 | -0.31 | ||
31 | AT5G57290 | 60S acidic ribosomal protein family | 0.84 | 0.33 | -0.31 | |||
32 | AT5G27770 | Ribosomal L22e protein family | 0.84 | 0.31 | -0.32 | |||
33 | AT1G02780 | Ribosomal protein L19e family protein | embryo defective 2386 | 0.84 | 0.3 | -0.34 | ||
34 | AT3G11400 | eukaryotic translation initiation factor 3G1 | ATEIF3G1, eukaryotic translation initiation factor 3G1 |
0.84 | 0.31 | -0.33 | ||
35 | AT2G39460 | ribosomal protein L23AA | ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN L23A, RIBOSOMAL PROTEIN L23A, RIBOSOMAL PROTEIN L23A1, ribosomal protein L23AA |
0.84 | 0.33 | -0.33 | ||
36 | AT1G18080 | Transducin/WD40 repeat-like superfamily protein | ATARCA, RACK1A, RECEPTOR FOR ACTIVATED C KINASE 1 A |
0.83 | 0.3 | -0.32 | ||
37 | AT1G75560 | zinc knuckle (CCHC-type) family protein | 0.83 | 0.3 | -0.32 | |||
38 | AT3G02080 | Ribosomal protein S19e family protein | 0.83 | 0.34 | -0.31 | |||
39 | AT2G19720 | ribosomal protein S15A B | ribosomal protein S15A B | 0.83 | 0.32 | -0.33 | ||
40 | AT5G04430 | binding to TOMV RNA 1L (long form) | BINDING TO TOMV RNA 1, binding to TOMV RNA 1L (long form), BINDING TO TOMV RNA 1S (SHORT FORM) |
0.82 | 0.32 | -0.33 | ||
41 | AT4G29830 | Transducin/WD40 repeat-like superfamily protein | vernalization independence 3 | 0.82 | 0.31 | -0.31 | ||
42 | AT3G53430 | Ribosomal protein L11 family protein | 0.82 | 0.31 | -0.31 | |||
43 | AT2G18290 | anaphase promoting complex 10 | anaphase promoting complex 10, EMBRYO DEFECTIVE 2783 |
0.82 | 0.3 | -0.3 | ||
44 | AT5G52650 | RNA binding Plectin/S10 domain-containing protein | 0.82 | 0.31 | -0.32 | |||
45 | AT1G26340 | cytochrome B5 isoform A | ARABIDOPSIS CYTOCHROME B5 ISOFORM A, B5 #6, cytochrome B5 isoform A |
0.82 | 0.34 | -0.31 | ||
46 | AT3G16940 | calmodulin binding;transcription regulators | -0.81 | 0.32 | -0.32 | |||
47 | AT1G14810 | semialdehyde dehydrogenase family protein | 0.81 | 0.3 | -0.34 | |||
48 | AT3G24740 | Protein of unknown function (DUF1644) | -0.81 | 0.34 | -0.3 | |||
49 | AT1G14980 | chaperonin 10 | chaperonin 10 | 0.81 | 0.28 | -0.32 | ||
50 | AT5G23290 | prefoldin 5 | prefoldin 5 | 0.81 | 0.32 | -0.33 | ||
51 | AT3G09820 | adenosine kinase 1 | adenosine kinase 1, ATADK1 | 0.81 | 0.32 | -0.31 | ||
52 | AT2G33845 | Nucleic acid-binding, OB-fold-like protein | 0.81 | 0.3 | -0.3 | |||
53 | AT5G03300 | adenosine kinase 2 | adenosine kinase 2 | 0.81 | 0.33 | -0.3 | ||
54 | AT5G25080 | Sas10/Utp3/C1D family | 0.81 | 0.32 | -0.31 | |||
55 | AT1G48830 | Ribosomal protein S7e family protein | 0.81 | 0.34 | -0.31 | |||
56 | AT3G55380 | ubiquitin-conjugating enzyme 14 | ubiquitin-conjugating enzyme 14 | 0.81 | 0.3 | -0.33 | ||
57 | AT5G51960 | CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.8 | 0.3 | -0.3 | |||
58 | AT4G00170 | Plant VAMP (vesicle-associated membrane protein) family protein |
0.8 | 0.3 | -0.3 | |||
59 | AT4G18040 | eukaryotic translation initiation factor 4E | ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITATION FACTOR 4E1, CUCUMOVIRUS MULTIPLICATION 1, eukaryotic translation initiation factor 4E, eukaryotic translation Initiation Factor 4E1 |
0.8 | 0.33 | -0.3 | ||
60 | AT5G05990 | Mitochondrial glycoprotein family protein | 0.8 | 0.31 | -0.33 | |||
61 | AT3G51010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.8 | 0.32 | -0.32 | |||
62 | AT3G10730 | SAD1/UNC-84 domain protein 2 | ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SAD1/UNC-84 domain protein 2 |
0.79 | 0.31 | -0.32 | ||
63 | AT1G71430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.79 | 0.33 | -0.33 | |||
64 | AT2G20140 | AAA-type ATPase family protein | regulatory particle AAA-ATPase 2b | 0.79 | 0.31 | -0.33 | ||
65 | AT2G30410 | tubulin folding cofactor A (KIESEL) | KIESEL, TUBULIN FOLDING FACTOR A | 0.79 | 0.34 | -0.32 | ||
66 | AT5G66410 | phosducin-like protein 3 homolog | phosducin-like protein 3 homolog | 0.79 | 0.3 | -0.31 | ||
67 | AT4G14960 | Tubulin/FtsZ family protein | TUA6 | 0.79 | 0.33 | -0.32 | ||
68 | AT1G76300 | snRNP core protein SMD3 | snRNP core protein SMD3 | 0.79 | 0.34 | -0.31 | ||
69 | AT4G13170 | Ribosomal protein L13 family protein | 0.79 | 0.32 | -0.31 | |||
70 | AT2G21290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.79 | 0.36 | -0.32 | |||
71 | AT5G05010 | clathrin adaptor complexes medium subunit family protein | 0.79 | 0.32 | -0.32 | |||
72 | AT2G43130 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ARA-4, ARA4, ATRAB11F, ARABIDOPSIS RAB GTPASE HOMOLOG A5C, RABA5C |
0.79 | 0.32 | -0.29 | ||
73 | AT2G18910 | hydroxyproline-rich glycoprotein family protein | 0.79 | 0.32 | -0.32 | |||
74 | AT1G04040 | HAD superfamily, subfamily IIIB acid phosphatase | 0.79 | 0.31 | -0.31 | |||
75 | AT3G49590 | Autophagy-related protein 13 | autophagy-related 13 | -0.79 | 0.32 | -0.34 | ||
76 | AT2G24970 | unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.79 | 0.33 | -0.3 | |||
77 | AT5G50810 | translocase inner membrane subunit 8 | translocase inner membrane subunit 8 |
0.79 | 0.29 | -0.3 | ||
78 | AT3G49490 | unknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink). |
-0.78 | 0.32 | -0.32 | |||
79 | AT5G28520 | Mannose-binding lectin superfamily protein | -0.78 | 0.3 | -0.32 | |||
80 | AT3G61960 | Protein kinase superfamily protein | -0.78 | 0.31 | -0.31 | |||
81 | AT1G72770 | homology to ABI1 | HYPERSENSITIVE TO ABA1 | -0.77 | 0.32 | -0.32 | ||
82 | AT1G03080 | kinase interacting (KIP1-like) family protein | -0.77 | 0.32 | -0.31 | |||
83 | AT1G55110 | indeterminate(ID)-domain 7 | indeterminate(ID)-domain 7, indeterminate(ID)-domain 7 |
-0.76 | 0.3 | -0.31 | ||
84 | AT5G22850 | Eukaryotic aspartyl protease family protein | -0.76 | 0.32 | -0.34 | |||
85 | AT1G20880 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.76 | 0.32 | -0.31 | |||
86 | AT1G67310 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
-0.76 | 0.34 | -0.33 | |||
87 | AT1G73980 | Phosphoribulokinase / Uridine kinase family | -0.75 | 0.33 | -0.3 | |||
88 | AT3G01100 | hypothetical protein 1 | ARABIDOPSIS THALIANA HYPOTHETICAL PROTEIN 1, hypothetical protein 1 |
-0.75 | 0.32 | -0.33 | ||
89 | AT2G26890 | DNAJ heat shock N-terminal domain-containing protein | GRAVITROPISM DEFECTIVE 2, KATAMARI2 |
-0.75 | 0.31 | -0.3 | ||
90 | AT2G28290 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
CHROMATIN REMODELING COMPLEX SUBUNIT R 3, SPLAYED |
-0.74 | 0.3 | -0.32 | ||
91 | AT4G38350 | Patched family protein | -0.74 | 0.3 | -0.3 | |||
92 | AT1G42470 | Patched family protein | -0.74 | 0.32 | -0.32 | |||
93 | AT4G08500 | MAPK/ERK kinase kinase 1 | ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK kinase kinase 1 |
-0.73 | 0.32 | -0.32 | ||
94 | AT5G57390 | AINTEGUMENTA-like 5 | AINTEGUMENTA-like 5, CHOTTO 1, EMBRYOMAKER, PLETHORA 5 |
-0.73 | 0.31 | -0.33 | ||
95 | AT1G09960 | sucrose transporter 4 | SUCROSE TRANSPORTER 4, SUCROSE TRANSPORTER 4, SUCROSE TRANSPORTER 4, sucrose transporter 4 |
-0.73 | 0.32 | -0.31 | ||
96 | AT1G77800 | PHD finger family protein | -0.72 | 0.3 | -0.3 | |||
97 | AT4G29790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). |
-0.72 | 0.31 | -0.3 | |||
98 | AT3G14270 | phosphatidylinositol-4-phosphate 5-kinase family protein | FORMS APLOID AND BINUCLEATE CELLS 1B |
-0.72 | 0.31 | -0.33 | ||
99 | AT1G63720 | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in 96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79 (source: NCBI BLink). |
-0.72 | 0.33 | -0.32 | |||
100 | AT3G62590 | alpha/beta-Hydrolases superfamily protein | -0.72 | 0.33 | -0.29 | |||
101 | AT4G32160 | Phox (PX) domain-containing protein | -0.72 | 0.33 | -0.29 | |||
102 | AT5G40340 | Tudor/PWWP/MBT superfamily protein | -0.71 | 0.31 | -0.33 | |||
103 | AT2G01460 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.71 | 0.32 | -0.32 | |||
104 | AT2G35060 | K+ uptake permease 11 | K+ uptake permease 11 | -0.71 | 0.31 | -0.31 | ||
105 | AT4G11370 | RING-H2 finger A1A | RING-H2 finger A1A | -0.71 | 0.31 | -0.33 | ||
106 | AT1G02080 | transcription regulators | -0.71 | 0.3 | -0.31 | |||
107 | AT1G09910 | Rhamnogalacturonate lyase family protein | -0.71 | 0.31 | -0.29 | |||
108 | AT3G15880 | WUS-interacting protein 2 | TOPLESS-RELATED 4, WUS-interacting protein 2 |
-0.71 | 0.33 | -0.33 | ||
109 | AT2G03140 | alpha/beta-Hydrolases superfamily protein | -0.7 | 0.3 | -0.33 | |||
110 | AT1G31480 | shoot gravitropism 2 (SGR2) | SHOOT GRAVITROPISM 2 | -0.7 | 0.33 | -0.33 | ||
111 | AT5G05570 | transducin family protein / WD-40 repeat family protein | -0.7 | 0.3 | -0.3 | |||
112 | AT3G57300 | INO80 ortholog | INO80 ORTHOLOG, INO80 ortholog | -0.7 | 0.31 | -0.31 | ||
113 | AT2G43500 | Plant regulator RWP-RK family protein | -0.7 | 0.32 | -0.33 | |||
114 | AT3G08020 | PHD finger family protein | -0.7 | 0.33 | -0.3 | |||
115 | AT4G26180 | Mitochondrial substrate carrier family protein | -0.7 | 0.32 | -0.31 | |||
116 | AT2G31960 | glucan synthase-like 3 | glucan synthase-like 3, ATGSL3, GSL03, glucan synthase-like 3 |
-0.69 | 0.31 | -0.32 | ||
117 | AT4G18160 | Ca2+ activated outward rectifying K+ channel 6 | CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6, ATTPK3, Ca2+ activated outward rectifying K+ channel 6, TPK3 |
-0.69 | 0.32 | -0.34 | ||
118 | AT5G62090 | SEUSS-like 2 | SEUSS-like 2 | -0.69 | 0.3 | -0.34 | ||
119 | AT3G49810 | ARM repeat superfamily protein | -0.69 | 0.32 | -0.33 | |||
120 | AT1G69360 | Plant protein of unknown function (DUF863) | -0.69 | 0.32 | -0.31 | |||
121 | AT3G27870 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
-0.69 | 0.34 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
122 | C0111 | Hexa-2-O-glycerol-β-galactopyranoside | Hexa-2-O-gllycerol-β-D-galactopyranoside | - | - | -0.83 | 0.42 | -0.44 | ||
123 | C0123 | Isoleucine | D,L-Isoleucine | L-Isoleucine | tRNA charging, isoleucine biosynthesis I (from threonine), jasmonoyl-amino acid conjugates biosynthesis I, isoleucine degradation I |
-0.83 | 0.42 | -0.42 | ||
124 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
-0.71 | 0.32 | -0.34 | ||
125 | C0210 | Phytol | E-Phytol | Phytol | chlorophyll a degradation II, chlorophyll a degradation, phytol salvage pathway |
-0.7 | 0.41 | -0.44 | ||
126 | C0174 | MST_2370.2 | - | - | - | -0.69 | 0.42 | -0.43 |