AT3G26710 : cofactor assembly of complex C
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G26710
Description cofactor assembly of complex C
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C 1 0.31 -0.3
2 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.95 0.32 -0.31
3 AT4G19100 Protein of unknown function (DUF3464) photosynthesis affected mutant 68 0.94 0.31 -0.32
4 AT3G52380 chloroplast RNA-binding protein 33 chloroplast RNA-binding protein
33, PIGMENT DEFECTIVE 322		 0.94 0.32 -0.31
5 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.94 0.31 -0.31
6 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.92 0.29 -0.32
7 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.92 0.32 -0.31
8 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.91 0.32 -0.31
9 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.91 0.29 -0.33
10 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.91 0.3 -0.34
11 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.91 0.3 -0.33
12 AT2G28605 Photosystem II reaction center PsbP family protein 0.9 0.31 -0.32
13 AT1G53520 Chalcone-flavanone isomerase family protein 0.9 0.3 -0.32
14 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.9 0.3 -0.33
15 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.9 0.3 -0.3
16 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.9 0.3 -0.3
17 AT2G40760 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.89 0.33 -0.33
18 AT4G36390 Methylthiotransferase 0.89 0.29 -0.31
19 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.89 0.33 -0.3
20 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.31 -0.32
21 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.89 0.31 -0.33
22 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.89 0.34 -0.3
23 AT5G48630 Cyclin family protein 0.89 0.31 -0.32
24 AT1G66820 glycine-rich protein 0.89 0.32 -0.33
25 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.89 0.3 -0.33
26 AT5G52970 thylakoid lumen 15.0 kDa protein 0.89 0.29 -0.32
27 AT1G06190 Rho termination factor 0.88 0.31 -0.3
28 AT1G56050 GTP-binding protein-related 0.88 0.32 -0.32
29 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.88 0.33 -0.33
30 AT3G08740 elongation factor P (EF-P) family protein 0.88 0.32 -0.31
31 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.88 0.31 -0.33
32 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.88 0.35 -0.31
33 AT3G51870 Mitochondrial substrate carrier family protein 0.88 0.33 -0.31
34 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.88 0.33 -0.29
35 AT4G26370 antitermination NusB domain-containing protein 0.88 0.31 -0.3
36 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.88 0.32 -0.31
37 AT2G17240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G24506.1); Has 2795
Blast hits to 943 proteins in 155 species: Archae - 0;
Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153;
Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink).		 0.88 0.32 -0.32
38 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
Has 34 Blast hits to 34 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.88 0.32 -0.31
39 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.88 0.3 -0.32
40 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.88 0.32 -0.33
41 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.88 0.32 -0.31
42 AT4G34730 ribosome-binding factor A family protein 0.87 0.32 -0.29
43 AT3G58610 ketol-acid reductoisomerase 0.87 0.33 -0.31
44 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.87 0.32 -0.32
45 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.87 0.32 -0.31
46 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.87 0.33 -0.31
47 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.87 0.34 -0.3
48 AT3G05410 Photosystem II reaction center PsbP family protein 0.87 0.31 -0.32
49 AT3G21300 RNA methyltransferase family protein 0.87 0.32 -0.33
50 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.87 0.31 -0.31
51 AT1G60230 Radical SAM superfamily protein 0.87 0.3 -0.33
52 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.87 0.29 -0.33
53 AT1G51100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 26
Blast hits to 26 proteins in 9 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.87 0.32 -0.33
54 AT2G21860 violaxanthin de-epoxidase-related 0.87 0.31 -0.3
55 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.87 0.29 -0.35
56 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.33 -0.32
57 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.87 0.3 -0.32
58 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.3 -0.32
59 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.86 0.32 -0.3
60 AT5G14100 non-intrinsic ABC protein 14 ATP-binding cassette I11,
ARABIDOPSIS THALIANANON-INTRINSIC
ABC PROTEIN 14, non-intrinsic ABC
protein 14		 0.86 0.31 -0.3
61 AT4G28660 photosystem II reaction center PSB28 protein photosystem II reaction center
PSB28 protein		 0.86 0.32 -0.32
62 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.86 0.31 -0.31
63 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.86 0.31 -0.31
64 AT5G54600 Translation protein SH3-like family protein 0.86 0.3 -0.31
65 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.85 0.31 -0.31
66 AT3G02450 cell division protein ftsH, putative 0.85 0.32 -0.33
67 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.85 0.29 -0.31
68 AT5G13140 Pollen Ole e 1 allergen and extensin family protein 0.85 0.31 -0.31
69 AT4G31040 CemA-like proton extrusion protein-related 0.85 0.31 -0.31
70 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.85 0.31 -0.32
71 AT5G08050 Protein of unknown function (DUF1118) 0.85 0.31 -0.3
72 AT3G19810 Protein of unknown function (DUF177) 0.85 0.32 -0.31
73 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.85 0.33 -0.33
74 AT1G15690 Inorganic H pyrophosphatase family protein ARABIDOPSIS THALIANA V-PPASE 3,
AtVHP1;1, AVP-3, AVP1, FUGU 5		 0.85 0.31 -0.33
75 AT3G26900 shikimate kinase like 1 Arabidopsis thaliana shikimate
kinase-like 1, shikimate
kinase-like 1		 0.85 0.33 -0.3
76 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 25
Blast hits to 25 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.31 -0.33
77 AT1G70730 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 2 0.85 0.29 -0.34
78 AT5G63050 embryo defective 2759 embryo defective 2759 0.85 0.32 -0.33
79 AT2G24090 Ribosomal protein L35 0.85 0.34 -0.3
80 AT2G47800 multidrug resistance-associated protein 4 ATP-binding cassette C4, multidrug
resistance-associated protein 4,
EST3, multidrug
resistance-associated protein 4		 -0.84 0.3 -0.3
81 AT4G36830 GNS1/SUR4 membrane protein family HOS3-1 -0.82 0.33 -0.3
82 AT2G02370 SNARE associated Golgi protein family -0.82 0.32 -0.31
83 AT2G39050 hydroxyproline-rich glycoprotein family protein ArathEULS3, Euonymus lectin S3 -0.81 0.31 -0.32
84 AT3G13310 Chaperone DnaJ-domain superfamily protein -0.81 0.34 -0.31
85 AT2G29990 alternative NAD(P)H dehydrogenase 2 alternative NAD(P)H dehydrogenase
2		 -0.8 0.31 -0.31
86 AT2G40270 Protein kinase family protein -0.8 0.32 -0.33
87 AT2G17500 Auxin efflux carrier family protein -0.79 0.31 -0.31
88 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 -0.79 0.32 -0.31
89 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.79 0.3 -0.31
90 AT3G14620 cytochrome P450, family 72, subfamily A, polypeptide 8 cytochrome P450, family 72,
subfamily A, polypeptide 8		 -0.79 0.31 -0.3
91 AT5G54840 Ras-related small GTP-binding family protein ATSGP1, SGP1 -0.79 0.3 -0.31
92 AT5G23580 calmodulin-like domain protein kinase 9 ARABIDOPSIS THALIANA
CALMODULIN-LIKE DOMAIN PROTEIN
KINASE 9, ATCPK12, calmodulin-like
domain protein kinase 9,
CALCIUM-DEPENDENT PROTEIN KINASE
12		 -0.78 0.32 -0.31
93 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.78 0.32 -0.3
94 AT3G25010 receptor like protein 41 receptor like protein 41, receptor
like protein 41		 -0.77 0.3 -0.33
95 AT3G50760 galacturonosyltransferase-like 2 galacturonosyltransferase-like 2 -0.77 0.29 -0.31
96 AT5G51770 Protein kinase superfamily protein -0.76 0.31 -0.31
97 AT1G76520 Auxin efflux carrier family protein -0.76 0.32 -0.33
98 AT4G31860 Protein phosphatase 2C family protein -0.76 0.31 -0.29
99 AT1G68620 alpha/beta-Hydrolases superfamily protein -0.76 0.33 -0.33
100 AT1G66760 MATE efflux family protein -0.76 0.32 -0.31
101 AT5G25930 Protein kinase family protein with leucine-rich repeat
domain		 -0.76 0.3 -0.31
102 AT2G37770 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C9, Chloroplastic aldo-keto
reductase		 -0.76 0.3 -0.31
103 AT1G77920 bZIP transcription factor family protein -0.75 0.29 -0.33
104 AT1G31130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in
29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi -
0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.75 0.3 -0.34
105 AT3G48850 phosphate transporter 3;2 phosphate transporter 3;2 -0.75 0.31 -0.31
106 AT4G31550 WRKY DNA-binding protein 11 ATWRKY11, WRKY DNA-binding protein
11		 -0.75 0.32 -0.31
107 AT2G46150 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.75 0.29 -0.31
108 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 -0.75 0.33 -0.31
109 AT3G54200 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.75 0.32 -0.3
110 AT2G17990 BEST Arabidopsis thaliana protein match is:
kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to
6129 proteins in 783 species: Archae - 220; Bacteria -
1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses -
38; Other Eukaryotes - 1653 (source: NCBI BLink).		 -0.75 0.33 -0.32
111 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.75 0.32 -0.34
112 AT1G70530 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 cysteine-rich RLK (RECEPTOR-like
protein kinase) 3		 -0.75 0.31 -0.33
113 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.74 0.3 -0.32
114 AT5G66650 Protein of unknown function (DUF607) -0.74 0.34 -0.32
115 AT2G43290 Calcium-binding EF-hand family protein multicopy suppressors of snf4
deficiency in yeast 3		 -0.74 0.29 -0.31
116 AT5G13320 Auxin-responsive GH3 family protein GH3-LIKE DEFENSE GENE 1, GRETCHEN
HAGEN 3.12, AVRPPHB SUSCEPTIBLE 3,
HOPW1-1-INTERACTING 3		 -0.74 0.31 -0.33
117 AT1G74410 RING/U-box superfamily protein -0.73 0.32 -0.3
118 AT4G16110 response regulator 2 response regulator 2, response
regulator 2		 -0.73 0.31 -0.31
119 AT4G02360 Protein of unknown function, DUF538 -0.72 0.3 -0.31
120 AT5G64510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 tunicamycin induced 1 -0.72 0.3 -0.31
121 AT3G26600 armadillo repeat only 4 armadillo repeat only 4 -0.71 0.3 -0.32
122 AT2G22300 signal responsive 1 CALMODULIN-BINDING TRANSCRIPTION
ACTIVATOR 3, signal responsive 1		 -0.7 0.33 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.78 0.44 -0.43 C0051
124 C0106 Glyceric acid D,L-Glyceric acid Glycerate photorespiration -0.72 0.34 -0.33 C0106