AT3G26640 : LIGHT-REGULATED WD 2
Query Information
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AGICode AT3G26640
Description Transducin/WD40 repeat-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 1 0.32 -0.31
2 AT1G11900 Tetratricopeptide repeat (TPR)-like superfamily protein 0.81 0.32 -0.31
3 AT5G48250 B-box type zinc finger protein with CCT domain 0.79 0.33 -0.33
4 AT3G57340 Heat shock protein DnaJ, N-terminal with domain of unknown
function (DUF1977)		 0.77 0.32 -0.32
5 AT1G47710 Serine protease inhibitor (SERPIN) family protein 0.76 0.32 -0.3
6 AT4G27880 Protein with RING/U-box and TRAF-like domains 0.76 0.32 -0.33
7 AT3G09320 DHHC-type zinc finger family protein 0.75 0.32 -0.32
8 AT1G65220 ARM repeat superfamily protein 0.75 0.31 -0.32
9 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 0.74 0.31 -0.3
10 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 0.74 0.32 -0.32
11 AT5G14240 Thioredoxin superfamily protein 0.73 0.3 -0.32
12 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.73 0.34 -0.33
13 AT1G02330 CONTAINS InterPro DOMAIN/s: Hepatocellular
carcinoma-associated antigen 59 (InterPro:IPR010756); Has
1239 Blast hits to 998 proteins in 204 species: Archae - 4;
Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87;
Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).		 0.73 0.34 -0.33
14 AT2G15440 Protein of unknown function (DUF579) -0.73 0.33 -0.34
15 AT3G55580 Regulator of chromosome condensation (RCC1) family protein 0.73 0.3 -0.32
16 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.72 0.31 -0.33
17 AT1G32860 Glycosyl hydrolase superfamily protein 0.72 0.3 -0.29
18 AT5G10790 ubiquitin-specific protease 22 ubiquitin-specific protease 22 0.72 0.32 -0.31
19 AT1G29820 Magnesium transporter CorA-like family protein 0.71 0.3 -0.33
20 AT1G51600 ZIM-LIKE 2 GATA TRANSCRIPTION FACTOR 28,
TIFY2A, ZIM-LIKE 2		 0.71 0.32 -0.32
21 AT1G68500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25422.1); Has 16 Blast hits
to 16 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.3 -0.32
22 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.71 0.32 -0.34
23 AT5G57660 CONSTANS-like 5 ATCOL5, CONSTANS-like 5 0.7 0.3 -0.34
24 AT2G33730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.33
25 AT4G38580 farnesylated protein 6 farnesylated protein 6,
farnesylated protein 6, HEAVY
METAL ASSOCIATED ISOPRENYLATED
PLANT PROTEIN 26		 0.7 0.3 -0.33
26 AT2G28720 Histone superfamily protein 0.7 0.33 -0.32
27 AT5G39570 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.7 0.32 -0.34
28 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.69 0.33 -0.31
29 AT3G11210 SGNH hydrolase-type esterase superfamily protein 0.69 0.34 -0.31
30 AT3G50670 U1 small nuclear ribonucleoprotein-70K U1 small nuclear
ribonucleoprotein-70K, U1SNRNP		 0.69 0.32 -0.32
31 AT5G51410 LUC7 N_terminus domain-containing protein 0.69 0.33 -0.34
32 AT1G49560 Homeodomain-like superfamily protein 0.69 0.31 -0.31
33 AT4G32240 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.29 -0.3
34 AT3G53000 phloem protein 2-A15 phloem protein 2-A15, phloem
protein 2-A15		 0.68 0.33 -0.33
35 AT4G23630 VIRB2-interacting protein 1 VIRB2-interacting protein 1,
Reticulan like protein B1		 0.68 0.3 -0.32
36 AT4G23040 Ubiquitin-like superfamily protein 0.68 0.32 -0.31
37 AT1G07360 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5A 0.68 0.3 -0.32
38 AT1G33230 TMPIT-like protein 0.68 0.31 -0.33
39 AT1G64890 Major facilitator superfamily protein 0.68 0.32 -0.32
40 AT4G27750 binding IMPAIRED SUCROSE INDUCTION 1 0.68 0.33 -0.32
41 AT5G04330 Cytochrome P450 superfamily protein -0.68 0.31 -0.33
42 AT1G56160 myb domain protein 72 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 72, myb domain protein 72		 0.68 0.34 -0.3
43 AT1G49370 pseudogene, similar to OSJNBa0072F16.8, blastp match of 42%
identity and 6.6e-73 P-value to
GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza
sativa (japonica cultivar-group)}		 -0.67 0.32 -0.33
44 AT4G23110 insulin-like growth factor binding -0.67 0.32 -0.3
45 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.32 -0.32
46 AT2G21520 Sec14p-like phosphatidylinositol transfer family protein 0.67 0.32 -0.32
47 AT1G71000 Chaperone DnaJ-domain superfamily protein 0.67 0.33 -0.34
48 AT2G12550 ubiquitin-associated (UBA)/TS-N domain-containing protein homolog of human NUB1 0.66 0.32 -0.36
49 AT5G63640 ENTH/VHS/GAT family protein 0.66 0.31 -0.32
50 AT2G16040 hAT dimerisation domain-containing protein /
transposase-related		 0.66 0.35 -0.35
51 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.66 0.33 -0.32
52 AT1G11090 alpha/beta-Hydrolases superfamily protein 0.66 0.31 -0.29
53 AT5G62880 RAC-like 10 RAC-like 10, ARABIDOPSIS THALIANA
RAC-LIKE 10, RHO-RELATED PROTEIN
FROM PLANTS 11, RAC-like 10,
RHO-related protein from plants 11		 0.66 0.32 -0.31
54 AT4G21110 G10 family protein 0.66 0.31 -0.31
55 AT2G40650 PRP38 family protein 0.66 0.31 -0.32
56 AT4G35040 Basic-leucine zipper (bZIP) transcription factor family
protein		 bZIP19 0.66 0.3 -0.31
57 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 0.66 0.32 -0.32
58 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.33 -0.32
59 AT2G39720 RING-H2 finger C2A RING-H2 finger C2A 0.66 0.31 -0.33
60 AT1G06390 GSK3/SHAGGY-like protein kinase 1 ATGSK1, A. THALIANA SHAGGY-LIKE
KINASE GROUP 2 3, SHAGGY-LIKE
PROTEIN KINASE 22, BIN2-LIKE 2,
GSK3/SHAGGY-like protein kinase 1,
SHAGGY-LIKE PROTEIN KINASE 22		 0.66 0.33 -0.29
61 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}		 -0.66 0.32 -0.3
62 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.65 0.32 -0.3
63 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 -0.65 0.32 -0.29
64 AT5G06830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF773 (InterPro:IPR008491); Has 365 Blast
hits to 359 proteins in 109 species: Archae - 9; Bacteria -
13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0;
Other Eukaryotes - 80 (source: NCBI BLink).		 0.65 0.31 -0.3
65 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 0.65 0.32 -0.32
66 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.65 0.32 -0.33
67 AT1G05070 Protein of unknown function (DUF1068) 0.65 0.3 -0.31
68 AT3G28960 Transmembrane amino acid transporter family protein -0.64 0.32 -0.33
69 AT5G09390 CD2-binding protein-related 0.64 0.33 -0.33
70 AT1G77850 auxin response factor 17 auxin response factor 17 0.64 0.32 -0.33
71 AT5G51290 Diacylglycerol kinase family protein -0.64 0.32 -0.3
72 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.64 0.29 -0.33
73 AT2G02960 RING/FYVE/PHD zinc finger superfamily protein -0.64 0.32 -0.3
74 AT5G09320 Vacuolar sorting protein 9 (VPS9) domain VPS9B 0.64 0.32 -0.35
75 AT1G55530 RING/U-box superfamily protein 0.64 0.31 -0.32
76 AT3G07740 homolog of yeast ADA2 2A homolog of yeast ADA2 2A, ATADA2A,
HAC10, HXA02, HXA2		 0.63 0.33 -0.3
77 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 0.63 0.31 -0.34
78 AT1G77610 EamA-like transporter family protein 0.63 0.32 -0.3
79 AT1G12730 GPI transamidase subunit PIG-U -0.63 0.32 -0.3
80 AT4G14900 FRIGIDA-like protein 0.63 0.32 -0.32
81 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.33 -0.31
82 AT5G43860 chlorophyllase 2 ARABIDOPSIS THALIANA
CHLOROPHYLLASE 2, chlorophyllase 2		 0.63 0.3 -0.31
83 AT5G66200 armadillo repeat only 2 armadillo repeat only 2 0.63 0.33 -0.34
84 AT1G69670 cullin 3B ARABIDOPSIS THALIANA CULLIN 3B,
cullin 3B		 0.63 0.31 -0.32
85 AT1G08970 nuclear factor Y, subunit C9 HEME ACTIVATED PROTEIN 5C, nuclear
factor Y, subunit C9		 0.63 0.34 -0.3
86 AT5G06265 hyaluronan mediated motility receptor-related -0.63 0.31 -0.31
87 AT1G21670 LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller
(InterPro:IPR011659), Six-bladed beta-propeller, TolB-like
(InterPro:IPR011042); BEST Arabidopsis thaliana protein
match is: DPP6 N-terminal domain-like protein
(TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in
1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37;
Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes -
2591 (source: NCBI BLink).		 0.62 0.29 -0.31
88 AT3G48070 RING/U-box superfamily protein 0.62 0.31 -0.31
89 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 -0.62 0.3 -0.29
90 AT3G09650 Tetratricopeptide repeat (TPR)-like superfamily protein CRM3, HIGH CHLOROPHYLL
FLUORESCENCE 152		 0.62 0.31 -0.31
91 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.31 -0.31
92 AT1G77660 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.62 0.32 -0.31
93 AT4G05150 Octicosapeptide/Phox/Bem1p family protein 0.62 0.34 -0.32
94 AT4G03860 transposable element gene 0.62 0.3 -0.3
95 AT1G54390 PHD finger protein-related INHIBITOR OF GROWTH 2 -0.62 0.33 -0.29
96 AT3G11240 arginine-tRNA protein transferase 2 ATATE2, arginine-tRNA protein
transferase 2		 -0.62 0.3 -0.33
97 AT3G09760 RING/U-box superfamily protein 0.62 0.31 -0.34
98 AT5G56140 RNA-binding KH domain-containing protein 0.62 0.31 -0.33
99 AT1G34545 transposable element gene -0.61 0.31 -0.33
100 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.61 0.34 -0.29
101 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.33 -0.31
102 AT5G20450 CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);
BEST Arabidopsis thaliana protein match is: Myosin family
protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast
hits to 1458 proteins in 355 species: Archae - 28; Bacteria
- 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses -
3; Other Eukaryotes - 412 (source: NCBI BLink).		 -0.6 0.31 -0.3
103 AT4G22950 AGAMOUS-like 19 AGAMOUS-like 19, GL19 -0.6 0.3 -0.3
104 AT1G55310 SC35-like splicing factor 33 SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33,
SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33		 -0.58 0.34 -0.32
105 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.58 0.31 -0.32
106 AT2G20650 RING/U-box superfamily protein -0.58 0.32 -0.33
107 AT3G15390 silencing defective 5 silencing defective 5 -0.58 0.31 -0.3
108 AT1G14970 O-fucosyltransferase family protein -0.57 0.31 -0.32
109 AT2G07740 transposable element gene -0.57 0.32 -0.3
110 AT4G23660 polyprenyltransferase 1 polyprenyltransferase 1,
polyprenyltransferase 1		 -0.57 0.32 -0.31
111 AT1G54370 sodium hydrogen exchanger 5 NA+/H+ ANTIPORTER 5, sodium
hydrogen exchanger 5		 -0.57 0.33 -0.3
112 AT5G38580 FBD-like domain family protein -0.56 0.34 -0.3
113 AT1G38950 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.56 0.33 -0.33
114 AT4G17020 transcription factor-related -0.56 0.33 -0.35
115 AT2G26360 Mitochondrial substrate carrier family protein -0.56 0.32 -0.31
116 AT3G17280 F-box and associated interaction domains-containing protein -0.55 0.31 -0.31
117 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.55 0.33 -0.31
118 AT1G11160 Transducin/WD40 repeat-like superfamily protein -0.55 0.33 -0.32
119 AT1G17600 Disease resistance protein (TIR-NBS-LRR class) family -0.55 0.29 -0.31
120 AT1G68040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.55 0.33 -0.31
121 AT1G67860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67865.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.32 -0.31
122 AT3G16540 DegP protease 11 DegP protease 11 -0.54 0.33 -0.31
123 AT2G14420 transposable element gene -0.54 0.33 -0.31
124 AT5G47450 tonoplast intrinsic protein 2;3 ARABIDOPSIS THALIANA TONOPLAST
INTRINSIC PROTEIN 2;3,
DELTA-TONOPLAST INTRINSIC PROTEIN
3, tonoplast intrinsic protein 2;3		 -0.54 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0116 Hydroxylamine - Hydroxylamine - -0.71 0.45 -0.45 C0116