AT3G25210 : -
Query Information
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AGICode AT3G25210
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.32 -0.33
2 AT2G28840 XB3 ortholog 1 in Arabidopsis thaliana XB3 ortholog 1 in Arabidopsis
thaliana		 0.76 0.31 -0.31
3 AT3G09320 DHHC-type zinc finger family protein 0.76 0.31 -0.29
4 AT4G04300 transposable element gene 0.75 0.31 -0.33
5 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein 0.74 0.33 -0.32
6 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 0.74 0.32 -0.31
7 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 0.73 0.3 -0.29
8 AT5G58770 Undecaprenyl pyrophosphate synthetase family protein -0.72 0.3 -0.31
9 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.71 0.31 -0.31
10 AT3G43680 transposable element gene 0.71 0.32 -0.31
11 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.7 0.31 -0.3
12 AT2G06510 replication protein A 1A ARABIDOPSIS THALIANA REPLICATION
PROTEIN A 1A, ARABIDOPSIS THALIANA
RPA70-KDA SUBUNIT A, replication
protein A 1A, RPA70-KDA SUBUNIT A		 0.69 0.33 -0.31
13 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 0.69 0.3 -0.29
14 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.69 0.32 -0.32
15 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.69 0.31 -0.31
16 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.32 -0.33
17 AT1G65220 ARM repeat superfamily protein 0.69 0.34 -0.3
18 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 0.69 0.32 -0.3
19 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.69 0.34 -0.3
20 AT3G28960 Transmembrane amino acid transporter family protein -0.68 0.31 -0.31
21 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.32 -0.33
22 AT2G34315 Avirulence induced gene (AIG1) family protein -0.68 0.31 -0.32
23 AT1G38340 transposable element gene -0.68 0.3 -0.31
24 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.68 0.3 -0.31
25 AT4G34400 AP2/B3-like transcriptional factor family protein -0.68 0.31 -0.32
26 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.67 0.31 -0.3
27 AT5G14240 Thioredoxin superfamily protein 0.67 0.31 -0.3
28 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.67 0.32 -0.32
29 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 0.67 0.29 -0.29
30 AT5G14530 Transducin/WD40 repeat-like superfamily protein 0.67 0.32 -0.31
31 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.33 -0.3
32 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 0.67 0.3 -0.33
33 AT1G29820 Magnesium transporter CorA-like family protein 0.66 0.3 -0.32
34 AT2G07680 multidrug resistance-associated protein 11 ATP-binding cassette C13,
multidrug resistance-associated
protein 11, multidrug
resistance-associated protein 11		 -0.66 0.33 -0.3
35 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.66 0.31 -0.31
36 AT2G40650 PRP38 family protein 0.66 0.28 -0.33
37 AT4G25940 ENTH/ANTH/VHS superfamily protein -0.66 0.32 -0.3
38 AT5G42950 GYF domain-containing protein 0.66 0.31 -0.31
39 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 0.66 0.33 -0.32
40 AT3G30843 transposable element gene 0.66 0.32 -0.33
41 AT1G19530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl,
root, flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 47 Blast hits to 47 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.33 -0.33
42 AT2G30800 helicase in vascular tissue and tapetum ATVT-1, helicase in vascular
tissue and tapetum		 0.65 0.3 -0.32
43 AT2G42250 cytochrome P450, family 712, subfamily A, polypeptide 1 cytochrome P450, family 712,
subfamily A, polypeptide 1		 -0.65 0.3 -0.31
44 AT2G26410 IQ-domain 4 IQ-domain 4 0.65 0.32 -0.3
45 AT2G40210 AGAMOUS-like 48 AGAMOUS-like 48 -0.65 0.32 -0.3
46 AT5G38580 FBD-like domain family protein -0.64 0.3 -0.3
47 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.29
48 AT1G14890 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.64 0.33 -0.32
49 AT4G19670 RING/U-box superfamily protein -0.64 0.32 -0.31
50 AT1G11900 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.29
51 AT3G62890 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.33 -0.31
52 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 0.64 0.31 -0.32
53 AT4G27880 Protein with RING/U-box and TRAF-like domains 0.64 0.31 -0.31
54 AT5G44730 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.64 0.32 -0.33
55 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.63 0.32 -0.32
56 AT3G19120 PIF / Ping-Pong family of plant transposases 0.63 0.33 -0.3
57 AT2G23390 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase
(InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins
in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0;
Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes -
1088 (source: NCBI BLink).		 -0.63 0.32 -0.31
58 AT4G27130 Translation initiation factor SUI1 family protein 0.63 0.31 -0.33
59 AT1G77180 chromatin protein family SKIP 0.63 0.31 -0.31
60 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.29 -0.32
61 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.33 -0.33
62 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.33 -0.3
63 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 0.63 0.31 -0.33
64 AT1G54390 PHD finger protein-related INHIBITOR OF GROWTH 2 -0.63 0.31 -0.3
65 AT5G02150 Fes1C Fes1C 0.62 0.34 -0.3
66 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.62 0.33 -0.29
67 AT3G47120 RNA recognition motif (RRM)-containing protein 0.62 0.31 -0.31
68 AT1G67870 glycine-rich protein -0.62 0.31 -0.31
69 AT3G16830 TOPLESS-related 2 TOPLESS-related 2 0.62 0.3 -0.32
70 AT1G17240 receptor like protein 2 receptor like protein 2, receptor
like protein 2		 -0.62 0.32 -0.32
71 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.62 0.32 -0.33
72 AT5G06400 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.31 -0.31
73 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.33 -0.31
74 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL 0.62 0.32 -0.33
75 AT1G05690 BTB and TAZ domain protein 3 BTB and TAZ domain protein 3 -0.61 0.32 -0.33
76 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 0.61 0.31 -0.3
77 AT2G36350 Protein kinase superfamily protein 0.61 0.33 -0.29
78 AT2G14835 RING/U-box superfamily protein 0.61 0.31 -0.31
79 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.32 -0.3
80 AT2G01680 Ankyrin repeat family protein -0.61 0.3 -0.32
81 AT3G60530 GATA transcription factor 4 GATA transcription factor 4 0.61 0.32 -0.33
82 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.3 -0.31
83 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 -0.61 0.31 -0.29
84 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 0.61 0.32 -0.31
85 AT4G27435 Protein of unknown function (DUF1218) -0.61 0.31 -0.33
86 AT3G05510 Phospholipid/glycerol acyltransferase family protein 0.61 0.31 -0.31
87 AT5G47060 Protein of unknown function (DUF581) 0.61 0.33 -0.3
88 AT1G08630 threonine aldolase 1 threonine aldolase 1 0.61 0.31 -0.31
89 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA 0.6 0.32 -0.34
90 AT3G49050 alpha/beta-Hydrolases superfamily protein -0.6 0.31 -0.31
91 AT1G34545 transposable element gene -0.6 0.31 -0.29
92 AT4G18090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.31 -0.31
93 AT4G19600 Cyclin family protein CYCT1;4 0.6 0.33 -0.32
94 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.32
95 AT3G02400 SMAD/FHA domain-containing protein 0.6 0.33 -0.3
96 AT3G52890 KCBP-interacting protein kinase KCBP-interacting protein kinase 0.6 0.32 -0.33
97 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 -0.6 0.34 -0.3
98 AT4G37840 hexokinase-like 3 hexokinase-like 3 -0.6 0.31 -0.32
99 AT4G16442 Uncharacterised protein family (UPF0497) 0.6 0.3 -0.31
100 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.59 0.32 -0.34
101 AT4G24250 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 13,
MILDEW RESISTANCE LOCUS O 13		 -0.59 0.3 -0.31
102 AT5G11310 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.29 -0.33
103 AT3G51210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.3
104 AT4G20490 transposable element gene -0.59 0.29 -0.3
105 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.31
106 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.58 0.3 -0.3
107 AT3G11210 SGNH hydrolase-type esterase superfamily protein 0.58 0.32 -0.3
108 AT5G09280 Pectin lyase-like superfamily protein -0.58 0.3 -0.34
109 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 0.58 0.3 -0.3
110 AT3G03580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.32 -0.32
111 AT4G37580 Acyl-CoA N-acyltransferases (NAT) superfamily protein CONSTITUTIVE PHOTOMORPHOGENIC 3,
HOOKLESS 1, UNUSUAL SUGAR RESPONSE
2		 0.58 0.32 -0.31
112 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 -0.58 0.29 -0.31
113 AT3G15220 Protein kinase superfamily protein -0.58 0.31 -0.3
114 AT5G43670 Sec23/Sec24 protein transport family protein 0.58 0.32 -0.32
115 AT5G19490 Histone superfamily protein 0.58 0.33 -0.31
116 AT3G59440 Calcium-binding EF-hand family protein 0.58 0.32 -0.32
117 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 -0.58 0.31 -0.33
118 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 -0.58 0.31 -0.34
119 AT5G04330 Cytochrome P450 superfamily protein -0.58 0.29 -0.31
120 AT4G34970 actin depolymerizing factor 9 actin depolymerizing factor 9 0.58 0.32 -0.33
121 AT5G46460 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.3 -0.33
122 AT1G02450 NIM1-interacting 1 NIMIN-1, NIM1-interacting 1 -0.57 0.32 -0.31
123 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 -0.57 0.31 -0.31
124 AT3G03360 F-box/RNI-like superfamily protein -0.57 0.3 -0.31
125 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.57 0.31 -0.32
126 AT1G33430 Galactosyltransferase family protein -0.57 0.33 -0.33
127 AT2G43150 Proline-rich extensin-like family protein -0.57 0.32 -0.3
128 AT2G40990 DHHC-type zinc finger family protein -0.56 0.32 -0.32
129 AT2G04420 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.56 0.32 -0.3
130 AT5G51290 Diacylglycerol kinase family protein -0.56 0.3 -0.33
131 AT2G14630 transposable element gene -0.56 0.31 -0.27
132 AT2G22160 Cysteine proteinases superfamily protein -0.56 0.33 -0.35
133 AT2G38300 myb-like HTH transcriptional regulator family protein -0.56 0.31 -0.31
134 AT3G19050 phragmoplast orienting kinesin 2 phragmoplast orienting kinesin 2 -0.55 0.32 -0.33
135 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 -0.55 0.33 -0.32
136 AT1G71696 carboxypeptidase D, putative SUPPRESSOR OF LLP1 1 -0.55 0.32 -0.33
137 AT2G45040 Matrixin family protein -0.55 0.31 -0.33
138 AT3G54510 Early-responsive to dehydration stress protein (ERD4) -0.55 0.28 -0.32
139 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 -0.55 0.31 -0.33
140 AT1G67640 Transmembrane amino acid transporter family protein -0.55 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
141 C0126 Isorhamnetin-dirhamnoside - - - 0.76 0.41 -0.48
142 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.63 0.42 -0.41 C0012