AT3G28400 : -
Query Information
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AGICode AT3G28400
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28400 transposable element gene 1 0.31 -0.31
2 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.7 0.32 -0.31
3 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 0.64 0.33 -0.31
4 AT5G47430 DWNN domain, a CCHC-type zinc finger -0.63 0.33 -0.33
5 AT5G37520 Protein of Unknown Function (DUF239) 0.62 0.34 -0.32
6 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.29 -0.32
7 AT3G57890 Tubulin binding cofactor C domain-containing protein -0.61 0.31 -0.31
8 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 -0.61 0.33 -0.33
9 AT5G59660 Leucine-rich repeat protein kinase family protein 0.59 0.32 -0.29
10 AT2G28380 dsRNA-binding protein 2 dsRNA-binding protein 2 -0.59 0.31 -0.31
11 AT2G34940 VACUOLAR SORTING RECEPTOR 5 binding protein of 80 kDa 3;2,
VACUOLAR SORTING RECEPTOR 3;2,
VACUOLAR SORTING RECEPTOR 5		 0.58 0.3 -0.31
12 AT1G16690 Enhancer of polycomb-like transcription factor protein -0.58 0.31 -0.33
13 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.31 -0.32
14 AT1G13290 C2H2-like zinc finger protein DEFECTIVELY ORGANIZED TRIBUTARIES
5, WIP domain protein 6		 -0.58 0.33 -0.32
15 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein 0.58 0.34 -0.31
16 AT3G12140 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML1, EMSY-like 1 -0.57 0.32 -0.29
17 AT1G07270 Cell division control, Cdc6 -0.57 0.31 -0.3
18 AT5G54520 Transducin/WD40 repeat-like superfamily protein 0.57 0.31 -0.3
19 AT1G27960 evolutionarily conserved C-terminal region 9 evolutionarily conserved
C-terminal region 9		 0.57 0.31 -0.29
20 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.31 -0.33
21 AT5G49610 F-box family protein -0.57 0.32 -0.31
22 AT1G68270 AMP-dependent synthetase and ligase family protein -0.57 0.31 -0.31
23 AT2G16835 Aquaporin-like superfamily protein -0.56 0.32 -0.32
24 AT2G04300 Leucine-rich repeat protein kinase family protein -0.56 0.31 -0.32
25 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 -0.56 0.3 -0.32
26 AT2G21520 Sec14p-like phosphatidylinositol transfer family protein -0.56 0.34 -0.31
27 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17		 -0.56 0.31 -0.32
28 AT4G04170 transposable element gene 0.56 0.33 -0.35
29 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 -0.55 0.31 -0.31
30 AT2G46840 DOMAIN OF UNKNOWN FUNCTION 724 4 DOMAIN OF UNKNOWN FUNCTION 724 4,
DOMAIN OF UNKNOWN FUNCTION 724 4		 0.55 0.33 -0.31
31 AT1G63470 AT hook motif DNA-binding family protein -0.55 0.31 -0.32
32 AT5G64990 RAB GTPase homolog H1A RAB GTPase homolog H1A, RAB GTPase
homolog H1A		 -0.55 0.3 -0.31
33 AT5G46320 MADS-box family protein 0.55 0.3 -0.3
34 AT5G60570 Galactose oxidase/kelch repeat superfamily protein -0.55 0.31 -0.34
35 AT3G19670 pre-mRNA-processing protein 40B pre-mRNA-processing protein 40B,
pre-mRNA-processing protein 40B		 -0.54 0.31 -0.33
36 AT5G47580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 ALTERED SEED GERMINATION 7 -0.54 0.34 -0.32
37 AT3G46910 Cullin family protein 0.54 0.3 -0.31
38 AT2G06310 transposable element gene 0.54 0.32 -0.31
39 AT5G16300 Vps51/Vps67 family (components of vesicular transport)
protein		 -0.54 0.31 -0.32
40 AT3G58050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast
hits to 8116 proteins in 546 species: Archae - 41; Bacteria
- 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses
- 46; Other Eukaryotes - 4915 (source: NCBI BLink).		 -0.54 0.32 -0.32
41 AT2G07320 transposable element gene -0.54 0.35 -0.31
42 AT4G26340 F-box/RNI-like/FBD-like domains-containing protein 0.54 0.32 -0.31
43 AT5G07780 Actin-binding FH2 (formin homology 2) family protein 0.53 0.3 -0.31
44 AT4G15250 B-box type zinc finger protein with CCT domain 0.53 0.32 -0.31
45 AT5G49500 Signal recognition particle, SRP54 subunit protein 0.52 0.32 -0.32
46 AT1G67290 glyoxal oxidase-related protein glyoxal oxidase 1 0.52 0.32 -0.33
47 AT5G52620 F-box associated ubiquitination effector family protein 0.52 0.33 -0.31
48 AT2G42090 actin 9 actin 9 -0.52 0.33 -0.33
49 AT3G08670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast
hits to 29827 proteins in 1356 species: Archae - 46;
Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants -
2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI
BLink).		 -0.52 0.32 -0.32
50 AT1G06140 Pentatricopeptide repeat (PPR) superfamily protein mitochondrial editing factor 3 -0.52 0.31 -0.34
51 AT4G16710 glycosyltransferase family protein 28 0.52 0.32 -0.32
52 AT4G20420 Tapetum specific protein TAP35/TAP44 0.52 0.31 -0.32
53 AT1G63500 Protein kinase protein with tetratricopeptide repeat domain -0.52 0.33 -0.32
54 AT1G80740 chromomethylase 1 chromomethylase 1, DNA
METHYLTRANSFERASE 4		 0.52 0.31 -0.3
55 AT3G59180 Protein with RNI-like/FBD-like domains 0.52 0.3 -0.34
56 AT1G69820 gamma-glutamyl transpeptidase 3 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 -0.51 0.3 -0.33
57 AT3G06940 transposable element gene -0.51 0.3 -0.3
58 AT3G16540 DegP protease 11 DegP protease 11 0.51 0.32 -0.29
59 AT5G38840 SMAD/FHA domain-containing protein -0.51 0.3 -0.3
60 AT5G11430 SPOC domain / Transcription elongation factor S-II protein -0.51 0.31 -0.31
61 AT5G42700 AP2/B3-like transcriptional factor family protein 0.5 0.31 -0.32
62 AT1G66930 Protein kinase superfamily protein 0.5 0.31 -0.31
63 AT1G73440 calmodulin-related 0.5 0.29 -0.31
64 AT5G48950 Thioesterase superfamily protein 0.5 0.31 -0.31
65 AT2G06010 OBP3-responsive gene 4 OBP3-responsive gene 4 0.5 0.34 -0.3
66 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.5 0.31 -0.34
67 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 -0.5 0.32 -0.33
68 AT1G31960 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.49 0.32 -0.32
69 AT5G40140 RING/U-box superfamily protein with ARM repeat domain 0.49 0.32 -0.32
70 AT1G26320 Zinc-binding dehydrogenase family protein 0.49 0.31 -0.31
71 AT3G06280 F-box associated ubiquitination effector family protein 0.49 0.32 -0.31
72 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 0.49 0.33 -0.33
73 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 0.49 0.34 -0.3
74 AT1G70510 KNOTTED-like from Arabidopsis thaliana 2 ARABIDOPSIS THALIANA KN 1,
KNOTTED-like from Arabidopsis
thaliana 2		 0.49 0.3 -0.34
75 AT5G09340 Ubiquitin family protein 0.48 0.32 -0.31
76 AT4G15710 unknown protein; Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.48 0.31 -0.32
77 AT5G56380 F-box/RNI-like/FBD-like domains-containing protein 0.48 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0124 Isonicotinic acid - - - -0.63 0.44 -0.48