AT3G28430 : -
Query Information
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AGICode AT3G28430
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 1 0.29 -0.32
2 AT1G43260 hAT transposon superfamily protein 0.75 0.31 -0.32
3 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.72 0.3 -0.32
4 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.72 0.33 -0.33
5 AT3G15490 Regulator of Vps4 activity in the MVB pathway protein 0.71 0.34 -0.3
6 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 -0.71 0.31 -0.3
7 ATMG00400 hypothetical protein ORF157 0.7 0.3 -0.33
8 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.29 -0.33
9 AT3G31920 transposable element gene 0.7 0.33 -0.33
10 AT4G03640 transposable element gene 0.69 0.33 -0.29
11 AT2G23900 Pectin lyase-like superfamily protein -0.69 0.31 -0.33
12 AT2G17975 zinc finger (Ran-binding) family protein 0.69 0.31 -0.31
13 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.69 0.32 -0.29
14 AT3G29110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.69 0.3 -0.31
15 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 0.68 0.31 -0.3
16 AT4G11730 Cation transporter/ E1-E2 ATPase family protein -0.68 0.32 -0.33
17 AT3G58740 citrate synthase 1 citrate synthase 1 0.68 0.32 -0.3
18 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.31 -0.33
19 AT4G38120 ARM repeat superfamily protein 0.68 0.33 -0.31
20 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein		 0.67 0.31 -0.34
21 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 0.67 0.32 -0.33
22 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.67 0.33 -0.31
23 AT4G22300 carboxylesterases SUPPRESSOR OF AVRBST-ELICITED
RESISTANCE 1		 -0.66 0.31 -0.33
24 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.66 0.3 -0.31
25 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 0.66 0.31 -0.34
26 AT3G42530 transposable element gene 0.66 0.34 -0.31
27 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.66 0.29 -0.31
28 AT3G32060 transposable element gene -0.66 0.31 -0.32
29 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 0.65 0.29 -0.31
30 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 0.65 0.31 -0.3
31 AT5G13380 Auxin-responsive GH3 family protein 0.65 0.3 -0.3
32 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.65 0.31 -0.32
33 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.65 0.31 -0.3
34 AT5G11290 Plant protein of unknown function (DUF247) 0.65 0.31 -0.29
35 AT3G47230 transposable element gene -0.64 0.31 -0.32
36 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.31 -0.3
37 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.64 0.31 -0.31
38 AT1G63280 Serine protease inhibitor (SERPIN) family protein 0.64 0.32 -0.32
39 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.63 0.3 -0.31
40 AT3G57570 ARM repeat superfamily protein 0.63 0.32 -0.29
41 AT4G02190 Cysteine/Histidine-rich C1 domain family protein -0.63 0.31 -0.32
42 AT5G15070 Phosphoglycerate mutase-like family protein 0.63 0.3 -0.32
43 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.63 0.32 -0.31
44 AT2G25760 Protein kinase family protein 0.62 0.3 -0.32
45 AT1G47310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.3 -0.31
46 AT5G37890 Protein with RING/U-box and TRAF-like domains -0.62 0.31 -0.3
47 AT2G07650 transposable element gene 0.62 0.32 -0.32
48 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.62 0.32 -0.31
49 AT3G62890 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.31 -0.33
50 AT5G28170 transposable element gene 0.62 0.31 -0.32
51 AT3G57100 Protein of unknown function (DUF677) -0.62 0.31 -0.33
52 AT1G44060 transposable element gene -0.62 0.32 -0.31
53 AT1G05770 Mannose-binding lectin superfamily protein -0.62 0.31 -0.31
54 AT5G12050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.32 -0.3
55 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.62 0.32 -0.33
56 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH -0.61 0.31 -0.31
57 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.61 0.3 -0.3
58 AT5G33200 transposable element gene -0.61 0.34 -0.32
59 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 -0.61 0.34 -0.3
60 AT2G39520 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.32 -0.31
61 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.61 0.31 -0.31
62 AT5G37900 TRAF-like superfamily protein -0.61 0.31 -0.31
63 AT1G36910 transposable element gene -0.61 0.33 -0.31
64 AT3G24060 Plant self-incompatibility protein S1 family 0.61 0.32 -0.32
65 AT4G00760 pseudo-response regulator 8 pseudo-response regulator 8,
PSEUDO-RESPONSE REGULATOR 8		 0.61 0.31 -0.31
66 AT1G13200 F-box and associated interaction domains-containing protein 0.61 0.29 -0.33
67 AT2G36010 E2F transcription factor 3 ATE2FA, E2F transcription factor 3 -0.61 0.32 -0.33
68 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 -0.61 0.31 -0.3
69 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.61 0.31 -0.34
70 AT2G35740 nositol transporter 3 NOSITOL TRANSPORTER 3, nositol
transporter 3		 -0.61 0.31 -0.33
71 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.61 0.31 -0.32
72 AT3G43760 transposable element gene 0.61 0.33 -0.34
73 AT5G34830 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.31
74 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.61 0.31 -0.33
75 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 0.61 0.31 -0.33
76 AT1G75940 Glycosyl hydrolase superfamily protein ATA27, BETA GLUCOSIDASE 20 -0.6 0.31 -0.31
77 AT5G49070 3-ketoacyl-CoA synthase 21 3-ketoacyl-CoA synthase 21 0.6 0.3 -0.3
78 AT5G55060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in
80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi
- 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33
(source: NCBI BLink).		 0.6 0.31 -0.29
79 AT4G22640 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.32 -0.31
80 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 0.6 0.3 -0.31
81 AT3G52760 Integral membrane Yip1 family protein -0.6 0.32 -0.32
82 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.3
83 AT2G35550 basic pentacysteine 7 BASIC PENTACYSTEINE 7, BBR, basic
pentacysteine 7		 0.6 0.3 -0.32
84 AT4G28000 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.32 -0.31
85 AT5G48140 Pectin lyase-like superfamily protein -0.6 0.32 -0.31
86 AT1G27520 Glycosyl hydrolase family 47 protein 0.6 0.31 -0.32
87 AT5G20170 RNA polymerase II transcription mediators 0.6 0.32 -0.3
88 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 hypersensitive to excess boron 2 -0.6 0.33 -0.34
89 AT3G17090 Protein phosphatase 2C family protein -0.6 0.32 -0.33
90 AT4G17690 Peroxidase superfamily protein -0.59 0.31 -0.31
91 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.59 0.3 -0.31
92 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.34 -0.31
93 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.59 0.32 -0.31
94 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.32
95 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.29 -0.31
96 AT4G17710 homeodomain GLABROUS 4 homeodomain GLABROUS 4 0.59 0.33 -0.33
97 AT3G02270 Trimeric LpxA-like enzyme -0.59 0.31 -0.29
98 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.59 0.33 -0.3
99 AT4G09960 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 11, SEEDSTICK -0.59 0.33 -0.32
100 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.59 0.3 -0.3
101 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.59 0.34 -0.29
102 AT2G20660 ralf-like 14 ralf-like 14 -0.58 0.3 -0.32
103 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.58 0.31 -0.31
104 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.58 0.31 -0.33
105 AT1G57750 cytochrome P450, family 96, subfamily A, polypeptide 15 cytochrome P450, family 96,
subfamily A, polypeptide 15,
MID-CHAIN ALKANE HYDROXYLASE 1		 -0.58 0.31 -0.32
106 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein -0.58 0.32 -0.28
107 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.58 0.3 -0.32
108 AT3G44270 transposable element gene -0.58 0.31 -0.31
109 AT3G18170 Glycosyltransferase family 61 protein -0.58 0.3 -0.32
110 AT2G34330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29540.1); Has 10 Blast hits
to 10 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.3
111 AT2G06960 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.32 -0.3
112 AT1G26860 transposable element gene -0.57 0.31 -0.34
113 AT4G33370 DEA(D/H)-box RNA helicase family protein -0.57 0.33 -0.3
114 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT -0.57 0.3 -0.3
115 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.57 0.35 -0.3
116 AT4G33390 Plant protein of unknown function (DUF827) -0.57 0.31 -0.32
117 AT5G54700 Ankyrin repeat family protein -0.56 0.31 -0.33
118 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 -0.56 0.32 -0.31
119 AT2G22060 BEST Arabidopsis thaliana protein match is: Galactose
oxidase/kelch repeat superfamily protein
(TAIR:AT2G22030.1); Has 148 Blast hits to 148 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 148; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.32 -0.3
120 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.3 -0.35
121 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.56 0.31 -0.31
122 AT5G07040 RING/U-box superfamily protein -0.56 0.32 -0.29
123 AT1G13540 Protein of unknown function (DUF1262) -0.56 0.32 -0.33
124 AT3G19610 Plant protein of unknown function (DUF936) -0.56 0.31 -0.31
125 AT1G53000 Nucleotide-diphospho-sugar transferases superfamily protein AtCKS, CMP-KDO synthetase, KDSB -0.55 0.3 -0.32
126 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 -0.55 0.31 -0.32
127 AT3G05610 Plant invertase/pectin methylesterase inhibitor superfamily -0.55 0.32 -0.32
128 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.55 0.31 -0.31
129 AT2G13335 transposable element gene -0.55 0.3 -0.31
130 AT2G41930 Protein kinase superfamily protein -0.55 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
131 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis 0.67 0.45 -0.46 C0193