AT3G12930 : -
Query Information
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AGICode AT3G12930
Description Lojap-related protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12930 Lojap-related protein 1 0.31 -0.34
2 AT5G65220 Ribosomal L29 family protein 0.96 0.33 -0.31
3 AT2G33450 Ribosomal L28 family 0.96 0.31 -0.3
4 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.96 0.32 -0.31
5 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.96 0.3 -0.31
6 AT3G54210 Ribosomal protein L17 family protein 0.95 0.31 -0.31
7 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.95 0.32 -0.31
8 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.95 0.31 -0.31
9 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.95 0.32 -0.31
10 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.95 0.34 -0.29
11 AT1G06190 Rho termination factor 0.94 0.3 -0.31
12 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.94 0.31 -0.31
13 AT5G47190 Ribosomal protein L19 family protein 0.94 0.31 -0.32
14 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.94 0.32 -0.32
15 AT1G11430 plastid developmental protein DAG, putative 0.94 0.32 -0.32
16 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.94 0.31 -0.33
17 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.94 0.31 -0.31
18 AT2G43030 Ribosomal protein L3 family protein 0.94 0.34 -0.32
19 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.93 0.32 -0.35
20 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.93 0.34 -0.33
21 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.93 0.34 -0.34
22 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.93 0.33 -0.31
23 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.93 0.33 -0.32
24 AT4G17560 Ribosomal protein L19 family protein 0.93 0.31 -0.32
25 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.93 0.31 -0.33
26 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.93 0.32 -0.32
27 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.93 0.32 -0.32
28 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.92 0.33 -0.31
29 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.92 0.32 -0.29
30 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.92 0.34 -0.31
31 AT3G19810 Protein of unknown function (DUF177) 0.92 0.32 -0.31
32 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.92 0.31 -0.31
33 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.92 0.32 -0.3
34 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.92 0.31 -0.32
35 AT4G26370 antitermination NusB domain-containing protein 0.92 0.31 -0.32
36 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.92 0.3 -0.33
37 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.92 0.29 -0.3
38 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.92 0.3 -0.33
39 AT3G13120 Ribosomal protein S10p/S20e family protein 0.92 0.32 -0.31
40 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.92 0.31 -0.3
41 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.92 0.31 -0.3
42 AT1G51100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 26
Blast hits to 26 proteins in 9 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.92 0.3 -0.31
43 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.92 0.3 -0.34
44 AT3G08740 elongation factor P (EF-P) family protein 0.91 0.31 -0.32
45 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.91 0.33 -0.31
46 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.91 0.32 -0.32
47 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.91 0.32 -0.33
48 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.91 0.34 -0.32
49 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.91 0.33 -0.31
50 AT4G37510 Ribonuclease III family protein 0.91 0.33 -0.31
51 AT5G55220 trigger factor type chaperone family protein 0.91 0.29 -0.32
52 AT1G14270 CAAX amino terminal protease family protein 0.91 0.3 -0.31
53 AT3G20230 Ribosomal L18p/L5e family protein 0.91 0.31 -0.32
54 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.91 0.31 -0.34
55 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.91 0.33 -0.31
56 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.91 0.3 -0.3
57 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.91 0.31 -0.31
58 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.91 0.3 -0.33
59 AT4G34730 ribosome-binding factor A family protein 0.9 0.3 -0.32
60 AT2G45270 glycoprotease 1 glycoprotease 1 0.9 0.31 -0.32
61 AT4G34290 SWIB/MDM2 domain superfamily protein 0.9 0.31 -0.32
62 AT3G28460 methyltransferases 0.9 0.33 -0.32
63 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.9 0.31 -0.3
64 AT5G20040 isopentenyltransferase 9 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 9,
isopentenyltransferase 9		 0.9 0.33 -0.31
65 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.9 0.34 -0.32
66 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.9 0.31 -0.34
67 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.9 0.31 -0.32
68 AT2G39670 Radical SAM superfamily protein 0.9 0.32 -0.32
69 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.9 0.33 -0.32
70 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.9 0.33 -0.32
71 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.9 0.31 -0.32
72 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9 0.31 -0.33
73 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.9 0.31 -0.31
74 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.3 -0.3
75 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.9 0.3 -0.32
76 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.9 0.33 -0.32
77 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.9 0.32 -0.31
78 AT1G53520 Chalcone-flavanone isomerase family protein 0.9 0.3 -0.3
79 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.9 0.32 -0.3
80 AT2G24090 Ribosomal protein L35 0.9 0.32 -0.34
81 AT5G54600 Translation protein SH3-like family protein 0.9 0.31 -0.33
82 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9 0.33 -0.34
83 AT1G14410 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 1, PTAC1,
WHIRLY 1		 0.9 0.34 -0.31
84 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.9 0.31 -0.32
85 AT1G56050 GTP-binding protein-related 0.89 0.29 -0.32
86 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.89 0.31 -0.32
87 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.89 0.32 -0.31
88 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.89 0.31 -0.3
89 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.89 0.31 -0.32
90 AT1G36390 Co-chaperone GrpE family protein 0.89 0.33 -0.31
91 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.89 0.34 -0.31
92 AT4G28660 photosystem II reaction center PSB28 protein photosystem II reaction center
PSB28 protein		 0.89 0.32 -0.31
93 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.89 0.35 -0.3
94 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.89 0.31 -0.32
95 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.89 0.3 -0.32
96 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.89 0.31 -0.31
97 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.89 0.31 -0.32
98 AT3G29185 Domain of unknown function (DUF3598) 0.89 0.33 -0.33
99 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.89 0.31 -0.34
100 AT3G18680 Amino acid kinase family protein 0.89 0.3 -0.29
101 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.89 0.32 -0.29
102 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.89 0.29 -0.3
103 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.89 0.32 -0.31
104 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.89 0.3 -0.32
105 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.89 0.33 -0.3
106 AT2G18710 SECY homolog 1 SECY homolog 1 0.89 0.34 -0.31
107 AT5G52970 thylakoid lumen 15.0 kDa protein 0.89 0.31 -0.33
108 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.89 0.31 -0.33
109 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.89 0.34 -0.29
110 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.89 0.34 -0.32
111 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 -0.82 0.3 -0.32
112 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.79 0.32 -0.31
113 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 -0.77 0.34 -0.31
114 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.76 0.33 -0.31
115 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.75 0.33 -0.32
116 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.74 0.31 -0.31
117 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.73 0.3 -0.32
118 AT5G49880 mitotic checkpoint family protein -0.73 0.3 -0.31
119 AT3G49810 ARM repeat superfamily protein -0.69 0.31 -0.31
120 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.68 0.31 -0.31
121 AT1G10050 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.68 0.3 -0.3
122 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.67 0.3 -0.34
123 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.77 0.45 -0.43 C0051