AT3G17090 : -
Query Information
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AGICode AT3G17090
Description Protein phosphatase 2C family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G17090 Protein phosphatase 2C family protein 1 0.32 -0.31
2 AT5G14240 Thioredoxin superfamily protein 0.74 0.28 -0.34
3 AT5G41850 alpha/beta-Hydrolases superfamily protein -0.73 0.33 -0.32
4 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 0.73 0.33 -0.29
5 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 -0.72 0.32 -0.3
6 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.71 0.33 -0.3
7 AT4G08420 transposable element gene 0.7 0.32 -0.33
8 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 0.7 0.33 -0.31
9 AT2G14835 RING/U-box superfamily protein 0.7 0.32 -0.32
10 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.32 -0.33
11 AT4G14510 CRM family member 3B ATCFM3B, CRM family member 3B -0.7 0.32 -0.34
12 AT5G19680 Leucine-rich repeat (LRR) family protein 0.7 0.33 -0.32
13 AT4G27000 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45C 0.69 0.31 -0.3
14 AT2G17975 zinc finger (Ran-binding) family protein -0.69 0.32 -0.31
15 AT2G23310 Rer1 family protein ATRER1C1 0.69 0.32 -0.31
16 AT5G08210 MIR834a; miRNA microRNA834A -0.69 0.34 -0.33
17 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 -0.68 0.33 -0.31
18 AT3G22360 alternative oxidase 1B alternative oxidase 1B 0.68 0.32 -0.32
19 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 0.68 0.3 -0.3
20 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.68 0.28 -0.33
21 AT5G02150 Fes1C Fes1C 0.67 0.31 -0.32
22 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.67 0.32 -0.33
23 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 0.66 0.31 -0.31
24 AT3G57570 ARM repeat superfamily protein -0.66 0.32 -0.34
25 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.66 0.32 -0.31
26 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT 0.66 0.34 -0.3
27 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 0.66 0.31 -0.31
28 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 0.65 0.31 -0.31
29 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.65 0.33 -0.3
30 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 0.65 0.31 -0.35
31 AT1G78150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits
to 146 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.33
32 AT2G07000 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.33 -0.31
33 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 0.65 0.32 -0.32
34 AT5G61650 CYCLIN P4;2 CYCP4, CYCLIN P4;2 0.65 0.32 -0.32
35 AT1G66170 RING/FYVE/PHD zinc finger superfamily protein MALE MEIOCYTE DEATH 1 -0.64 0.3 -0.32
36 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 0.64 0.32 -0.31
37 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.64 0.31 -0.32
38 AT1G13200 F-box and associated interaction domains-containing protein -0.64 0.33 -0.32
39 AT1G60270 beta glucosidase 6 beta glucosidase 6 -0.64 0.3 -0.32
40 AT2G37120 S1FA-like DNA-binding protein 0.63 0.3 -0.31
41 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 0.63 0.32 -0.34
42 AT4G30320 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.63 0.31 -0.31
43 AT4G22250 RING/U-box superfamily protein 0.63 0.32 -0.32
44 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.31 -0.31
45 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.63 0.32 -0.34
46 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.63 0.29 -0.32
47 AT4G21326 subtilase 3.12 subtilase 3.12, subtilase 3.12 -0.63 0.33 -0.31
48 AT1G15960 NRAMP metal ion transporter 6 ATNRAMP6, NRAMP metal ion
transporter 6		 -0.63 0.3 -0.31
49 AT1G51300 alpha/beta-Hydrolases superfamily protein -0.63 0.31 -0.32
50 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.63 0.31 -0.31
51 AT1G23830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.33 -0.32
52 AT1G76620 Protein of unknown function, DUF547 -0.63 0.28 -0.33
53 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 0.63 0.3 -0.33
54 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 -0.63 0.31 -0.31
55 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 -0.63 0.3 -0.33
56 AT1G53460 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF
zinc finger-like superfamily protein (TAIR:AT1G70650.2);
Has 485 Blast hits to 413 proteins in 88 species: Archae -
11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101;
Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).		 0.62 0.33 -0.32
57 AT3G62680 proline-rich protein 3 ARABIDOPSIS THALIANA PROLINE-RICH
PROTEIN 3, proline-rich protein 3		 0.62 0.3 -0.33
58 AT4G03760 transposable element gene 0.62 0.3 -0.33
59 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 0.62 0.33 -0.31
60 AT3G54130 Josephin family protein 0.62 0.3 -0.31
61 AT2G07650 transposable element gene -0.62 0.33 -0.3
62 AT4G04480 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
flower, pollen tube; EXPRESSED DURING: petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: F-box family protein with a
domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has
78 Blast hits to 78 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.3
63 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 -0.62 0.31 -0.3
64 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 -0.62 0.33 -0.31
65 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.3
66 AT1G05070 Protein of unknown function (DUF1068) 0.62 0.33 -0.3
67 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 0.62 0.28 -0.33
68 AT1G27520 Glycosyl hydrolase family 47 protein -0.62 0.31 -0.31
69 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 0.62 0.29 -0.31
70 AT2G20370 Exostosin family protein AtMUR3, KATAMARI 1, MURUS 3 0.62 0.32 -0.32
71 AT5G09970 cytochrome P450, family 78, subfamily A, polypeptide 7 cytochrome P450, family 78,
subfamily A, polypeptide 7		 0.62 0.33 -0.28
72 AT5G35420 transposable element gene -0.61 0.31 -0.31
73 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 0.61 0.3 -0.3
74 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION 0.61 0.31 -0.32
75 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 0.61 0.3 -0.33
76 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 -0.61 0.3 -0.31
77 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.61 0.31 -0.33
78 AT4G30420 nodulin MtN21 /EamA-like transporter family protein 0.61 0.31 -0.31
79 AT1G04700 PB1 domain-containing protein tyrosine kinase 0.61 0.34 -0.32
80 AT1G50840 polymerase gamma 2 polymerase gamma 2, polymerase I A -0.61 0.31 -0.3
81 AT2G20840 Secretory carrier membrane protein (SCAMP) family protein 0.61 0.31 -0.3
82 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 -0.61 0.33 -0.32
83 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.61 0.33 -0.35
84 AT1G70620 cyclin-related -0.61 0.29 -0.32
85 AT1G30160 Protein of unknown function (DUF295) -0.6 0.31 -0.33
86 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.6 0.31 -0.32
87 AT5G19800 hydroxyproline-rich glycoprotein family protein 0.6 0.33 -0.31
88 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.34
89 AT5G17150 Cystatin/monellin superfamily protein -0.6 0.3 -0.29
90 AT2G27990 BEL1-like homeodomain 8 BEL1-like homeodomain 8,
POUND-FOOLISH		 -0.6 0.3 -0.31
91 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.6 0.31 -0.31
92 AT2G10880 transposable element gene -0.59 0.32 -0.34
93 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 -0.59 0.32 -0.3
94 AT4G38410 Dehydrin family protein 0.59 0.31 -0.31
95 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 0.59 0.31 -0.3
96 AT3G44270 transposable element gene 0.59 0.31 -0.32
97 AT4G14560 indole-3-acetic acid inducible AUXIN RESISTANT 5, indole-3-acetic
acid inducible		 0.59 0.32 -0.32
98 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 -0.58 0.31 -0.31
99 AT3G61010 Ferritin/ribonucleotide reductase-like family protein -0.58 0.31 -0.34
100 AT2G17260 glutamate receptor 2 ATGLR2, ATGLR3.1, glutamate
receptor 2, GLR3.1		 -0.58 0.31 -0.31
101 AT3G49300 proline-rich family protein -0.58 0.3 -0.33
102 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.57 0.31 -0.32
103 AT1G41900 transposable element gene -0.57 0.33 -0.33
104 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 -0.57 0.32 -0.34
105 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 -0.57 0.32 -0.3
106 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.57 0.31 -0.31
107 AT4G33870 Peroxidase superfamily protein -0.57 0.32 -0.33
108 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.57 0.29 -0.33
109 AT4G19910 Toll-Interleukin-Resistance (TIR) domain family protein -0.56 0.32 -0.31
110 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 -0.56 0.32 -0.31
111 AT1G54370 sodium hydrogen exchanger 5 NA+/H+ ANTIPORTER 5, sodium
hydrogen exchanger 5		 -0.56 0.32 -0.3
112 AT5G24150 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE MONOOXYGENASE 5, SQP1 -0.56 0.3 -0.31
113 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 -0.55 0.33 -0.34
114 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 -0.55 0.3 -0.32
115 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.55 0.3 -0.32
116 AT5G28170 transposable element gene -0.55 0.32 -0.31
117 AT4G39560 Galactose oxidase/kelch repeat superfamily protein -0.55 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0211 PR_MST_2158.8 - - - -0.72 0.43 -0.48
119 C0232 Shikimic acid - Shikimate phenylpropanoid biosynthesis,
chorismate biosynthesis,
simple coumarins biosynthesis 		-0.68 0.31 -0.31 C0232