AGICode | AT3G25540 |
Description | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G25540 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein |
LONGEVITY ASSURANCE GENE 1 | 1 | 0.3 | -0.32 | ||
2 | AT4G11460 | cysteine-rich RLK (RECEPTOR-like protein kinase) 30 | cysteine-rich RLK (RECEPTOR-like protein kinase) 30 |
0.82 | 0.31 | -0.32 | ||
3 | AT3G14440 | nine-cis-epoxycarotenoid dioxygenase 3 | ATNCED3, nine-cis-epoxycarotenoid dioxygenase 3, SUGAR INSENSITIVE 7, SALT TOLERANT 1 |
-0.82 | 0.32 | -0.32 | ||
4 | AT1G60660 | cytochrome B5-like protein | ARABIDOPSIS CYTOCHROME B5-LIKE PROTEIN, B5 #5, cytochrome B5-like protein |
0.8 | 0.29 | -0.3 | ||
5 | AT5G57050 | Protein phosphatase 2C family protein | ABA INSENSITIVE 2, AtABI2 | -0.8 | 0.31 | -0.31 | ||
6 | AT5G13200 | GRAM domain family protein | -0.79 | 0.31 | -0.31 | |||
7 | AT1G06790 | RNA polymerase Rpb7 N-terminal domain-containing protein | 0.79 | 0.31 | -0.34 | |||
8 | AT1G18710 | myb domain protein 47 | myb domain protein 47, myb domain protein 47 |
-0.79 | 0.32 | -0.3 | ||
9 | AT4G25870 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.79 | 0.31 | -0.34 | |||
10 | AT2G01290 | ribose-5-phosphate isomerase 2 | ribose-5-phosphate isomerase 2 | 0.78 | 0.3 | -0.32 | ||
11 | AT1G67300 | Major facilitator superfamily protein | -0.78 | 0.33 | -0.31 | |||
12 | AT1G58360 | amino acid permease 1 | amino acid permease 1, NEUTRAL AMINO ACID TRANSPORTER 2 |
-0.78 | 0.31 | -0.31 | ||
13 | AT2G33330 | plasmodesmata-located protein 3 | plasmodesmata-located protein 3 | 0.78 | 0.3 | -0.32 | ||
14 | AT1G64660 | methionine gamma-lyase | methionine gamma-lyase, methionine gamma-lyase |
-0.78 | 0.3 | -0.32 | ||
15 | AT4G21870 | HSP20-like chaperones superfamily protein | 0.78 | 0.3 | -0.33 | |||
16 | AT1G76590 | PLATZ transcription factor family protein | -0.77 | 0.3 | -0.32 | |||
17 | AT1G24280 | glucose-6-phosphate dehydrogenase 3 | glucose-6-phosphate dehydrogenase 3 |
0.77 | 0.32 | -0.29 | ||
18 | AT2G17990 | BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink). |
-0.77 | 0.31 | -0.32 | |||
19 | AT1G70985 | hydroxyproline-rich glycoprotein family protein | 0.77 | 0.32 | -0.32 | |||
20 | AT4G27730 | oligopeptide transporter 1 | ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 6, oligopeptide transporter 1 |
0.76 | 0.31 | -0.32 | ||
21 | AT1G73480 | alpha/beta-Hydrolases superfamily protein | -0.76 | 0.31 | -0.31 | |||
22 | AT5G65650 | Protein of unknown function (DUF1195) | 0.76 | 0.31 | -0.32 | |||
23 | AT3G14770 | Nodulin MtN3 family protein | AtSWEET2, SWEET2 | 0.76 | 0.3 | -0.32 | ||
24 | AT1G67920 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.76 | 0.31 | -0.34 | |||
25 | AT2G40150 | TRICHOME BIREFRINGENCE-LIKE 28 | TRICHOME BIREFRINGENCE-LIKE 28 | 0.76 | 0.32 | -0.3 | ||
26 | AT5G17850 | Sodium/calcium exchanger family protein | -0.76 | 0.33 | -0.3 | |||
27 | AT4G16190 | Papain family cysteine protease | -0.76 | 0.32 | -0.29 | |||
28 | AT4G18700 | CBL-interacting protein kinase 12 | WPL4-LIKE 4, CBL-interacting protein kinase 12, SNF1-RELATED PROTEIN KINASE 3.9, WPL4-LIKE 4 |
-0.75 | 0.31 | -0.32 | ||
29 | AT5G18200 | UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases |
-0.75 | 0.34 | -0.32 | |||
30 | AT4G00710 | BR-signaling kinase 3 | BR-signaling kinase 3 | 0.75 | 0.32 | -0.33 | ||
31 | AT2G38790 | unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.75 | 0.32 | -0.3 | |||
32 | AT5G27450 | mevalonate kinase | mevalonate kinase, MEVALONATE KINASE |
0.75 | 0.32 | -0.3 | ||
33 | AT3G52950 | CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein |
0.75 | 0.35 | -0.3 | |||
34 | AT5G64030 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.75 | 0.32 | -0.33 | |||
35 | AT2G04350 | AMP-dependent synthetase and ligase family protein | long-chain acyl-CoA synthetase 8 | -0.75 | 0.33 | -0.32 | ||
36 | AT1G65840 | polyamine oxidase 4 | polyamine oxidase 4, polyamine oxidase 4 |
0.74 | 0.33 | -0.32 | ||
37 | AT2G46270 | G-box binding factor 3 | G-box binding factor 3 | -0.74 | 0.34 | -0.31 | ||
38 | AT1G62480 | Vacuolar calcium-binding protein-related | 0.74 | 0.31 | -0.34 | |||
39 | AT4G17870 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
PYRABACTIN RESISTANCE 1, regulatory component of ABA receptor 11 |
0.74 | 0.34 | -0.35 | ||
40 | AT2G23130 | arabinogalactan protein 17 | arabinogalactan protein 17, ATAGP17 |
0.74 | 0.32 | -0.32 | ||
41 | AT5G20980 | methionine synthase 3 | methionine synthase 3, methionine synthase 3 |
0.74 | 0.32 | -0.31 | ||
42 | AT3G20300 | Protein of unknown function (DUF3537) | -0.74 | 0.32 | -0.32 | |||
43 | AT2G30520 | Phototropic-responsive NPH3 family protein | ROOT PHOTOTROPISM 2 | 0.73 | 0.31 | -0.32 | ||
44 | AT4G26080 | Protein phosphatase 2C family protein | ABA INSENSITIVE 1, AtABI1 | -0.73 | 0.32 | -0.31 | ||
45 | AT4G12390 | pectin methylesterase inhibitor 1 | pectin methylesterase inhibitor 1 | 0.73 | 0.3 | -0.34 | ||
46 | AT1G29400 | MEI2-like protein 5 | MEI2-like protein 5, MEI2-like protein 5 |
-0.73 | 0.31 | -0.35 | ||
47 | AT3G29575 | ABI five binding protein 3 | ABI five binding protein 3 | -0.73 | 0.31 | -0.32 | ||
48 | AT5G49660 | Leucine-rich repeat transmembrane protein kinase family protein |
XYLEM INTERMIXED WITH PHLOEM 1 | -0.73 | 0.29 | -0.31 | ||
49 | AT5G66770 | GRAS family transcription factor | 0.73 | 0.32 | -0.31 | |||
50 | AT4G19960 | K+ uptake permease 9 | ATKUP9, HAK9, KT9, K+ uptake permease 9 |
-0.73 | 0.29 | -0.31 | ||
51 | AT3G07270 | GTP cyclohydrolase I | 0.72 | 0.29 | -0.32 | |||
52 | AT3G07950 | rhomboid protein-related | 0.72 | 0.31 | -0.33 | |||
53 | AT1G76380 | DNA-binding bromodomain-containing protein | -0.72 | 0.3 | -0.31 | |||
54 | AT3G07630 | arogenate dehydratase 2 | arogenate dehydratase 2, Arabidopsis thaliana arogenate dehydratase 2 |
0.72 | 0.31 | -0.33 | ||
55 | AT4G21410 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29 |
0.72 | 0.32 | -0.29 | ||
56 | AT3G07360 | plant U-box 9 | ARABIDOPSIS THALIANA PLANT U-BOX 9, plant U-box 9 |
-0.71 | 0.31 | -0.33 | ||
57 | AT4G20840 | FAD-binding Berberine family protein | 0.71 | 0.32 | -0.31 | |||
58 | AT1G64970 | gamma-tocopherol methyltransferase | gamma-tocopherol methyltransferase, TMT1, VITAMIN E DEFICIENT 4 |
-0.71 | 0.29 | -0.29 | ||
59 | AT3G01120 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
AtCGS1, A. thaliana cystathionine gamma-synthetase 1, CYSTATHIONINE GAMMA-SYNTHASE, CYSTATHIONINE GAMMA-SYNTHASE 1, METHIONINE OVERACCUMULATION 1 |
0.71 | 0.33 | -0.32 | ||
60 | AT4G37540 | LOB domain-containing protein 39 | LOB domain-containing protein 39 | 0.71 | 0.33 | -0.31 | ||
61 | AT3G09300 | OSBP(oxysterol binding protein)-related protein 3B | OSBP(oxysterol binding protein)-related protein 3B |
0.71 | 0.3 | -0.32 | ||
62 | AT3G04240 | Tetratricopeptide repeat (TPR)-like superfamily protein | secret agent | -0.71 | 0.33 | -0.32 | ||
63 | AT4G18880 | heat shock transcription factor A4A | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A4A, heat shock transcription factor A4A |
-0.71 | 0.32 | -0.32 | ||
64 | AT3G28220 | TRAF-like family protein | -0.71 | 0.3 | -0.32 | |||
65 | AT2G24170 | Endomembrane protein 70 protein family | 0.71 | 0.3 | -0.31 | |||
66 | AT5G23850 | Arabidopsis thaliana protein of unknown function (DUF821) | -0.7 | 0.32 | -0.33 | |||
67 | AT5G62020 | heat shock transcription factor B2A | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A, heat shock transcription factor B2A |
-0.7 | 0.32 | -0.28 | ||
68 | AT1G51090 | Heavy metal transport/detoxification superfamily protein | -0.7 | 0.29 | -0.34 | |||
69 | AT3G18830 | polyol/monosaccharide transporter 5 | POLYOL TRANSPORTER 5, ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, polyol/monosaccharide transporter 5 |
-0.7 | 0.32 | -0.29 | ||
70 | AT5G06760 | Late Embryogenesis Abundant 4-5 | Late Embryogenesis Abundant 4-5, Late Embryogenesis Abundant 4-5 |
-0.7 | 0.3 | -0.31 | ||
71 | AT2G32800 | protein kinase family protein | AP4.3A | -0.7 | 0.31 | -0.3 | ||
72 | AT1G80410 | tetratricopeptide repeat (TPR)-containing protein | EMBRYO DEFECTIVE 2753, OMISHA | 0.7 | 0.29 | -0.32 | ||
73 | AT1G70590 | F-box family protein | -0.7 | 0.3 | -0.31 | |||
74 | AT1G13320 | protein phosphatase 2A subunit A3 | protein phosphatase 2A subunit A3 | 0.7 | 0.32 | -0.29 | ||
75 | AT2G40570 | initiator tRNA phosphoribosyl transferase family protein | 0.7 | 0.31 | -0.31 | |||
76 | AT2G34050 | INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). |
0.7 | 0.31 | -0.31 | |||
77 | AT4G37450 | arabinogalactan protein 18 | arabinogalactan protein 18, ATAGP18 |
0.7 | 0.33 | -0.31 | ||
78 | AT2G35680 | Phosphotyrosine protein phosphatases superfamily protein | -0.7 | 0.32 | -0.33 | |||
79 | AT5G27280 | Zim17-type zinc finger protein | -0.7 | 0.34 | -0.33 | |||
80 | AT4G36010 | Pathogenesis-related thaumatin superfamily protein | -0.69 | 0.34 | -0.31 | |||
81 | AT4G19390 | Uncharacterised protein family (UPF0114) | -0.69 | 0.31 | -0.32 | |||
82 | AT1G23090 | sulfate transporter 91 | sulfate transporter 91, SULTR3;3 | 0.69 | 0.32 | -0.34 | ||
83 | AT3G17700 | cyclic nucleotide-binding transporter 1 | CYCLIC NUCLEOTIDE-GATED CHANNEL 20, cyclic nucleotide-binding transporter 1, CNGC20 |
-0.69 | 0.33 | -0.3 | ||
84 | AT3G15780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.34 | -0.32 | |||
85 | AT5G01820 | serine/threonine protein kinase 1 | ATCIPK14, serine/threonine protein kinase 1, CBL-INTERACTING PROTEIN KINASE 14, SOS2-like protein kinase 24, SNF1-RELATED PROTEIN KINASE 3.15, serine/threonine protein kinase 1 |
-0.69 | 0.31 | -0.32 | ||
86 | AT2G28400 | Protein of unknown function, DUF584 | -0.69 | 0.32 | -0.33 | |||
87 | AT4G32940 | gamma vacuolar processing enzyme | gamma vacuolar processing enzyme, GAMMAVPE |
-0.69 | 0.3 | -0.34 | ||
88 | AT4G24480 | Protein kinase superfamily protein | -0.69 | 0.34 | -0.32 | |||
89 | AT5G26770 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.31 | -0.32 | |||
90 | AT2G31660 | ARM repeat superfamily protein | enhanced miRNA activity 1, SUPER SENSITIVE TO ABA AND DROUGHT2, UNARMED 9 |
0.69 | 0.31 | -0.33 | ||
91 | AT3G23280 | XB3 ortholog 5 in Arabidopsis thaliana | XB3 ortholog 5 in Arabidopsis thaliana |
-0.68 | 0.32 | -0.32 | ||
92 | AT5G12140 | cystatin-1 | cystatin-1, cystatin-1 | -0.68 | 0.3 | -0.31 | ||
93 | AT3G55740 | proline transporter 2 | PROLINE TRANSPORTER 2, proline transporter 2 |
-0.68 | 0.32 | -0.33 | ||
94 | AT2G42540 | cold-regulated 15a | COR15, cold-regulated 15a | -0.68 | 0.32 | -0.31 | ||
95 | AT3G01560 | Protein of unknown function (DUF1421) | -0.68 | 0.31 | -0.31 | |||
96 | AT1G67970 | heat shock transcription factor A8 | AT-HSFA8, heat shock transcription factor A8 |
-0.68 | 0.3 | -0.3 | ||
97 | AT1G60470 | galactinol synthase 4 | galactinol synthase 4, galactinol synthase 4 |
-0.68 | 0.32 | -0.3 | ||
98 | AT5G27420 | carbon/nitrogen insensitive 1 | ATL31, carbon/nitrogen insensitive 1 |
-0.68 | 0.31 | -0.32 | ||
99 | AT5G14640 | shaggy-like kinase 13 | SHAGGY-LIKE KINASE 13, shaggy-like kinase 13 |
-0.67 | 0.31 | -0.31 | ||
100 | AT5G03210 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
AtDIP2, DBP-interacting protein 2 | -0.67 | 0.3 | -0.3 | ||
101 | AT1G78410 | VQ motif-containing protein | -0.67 | 0.29 | -0.33 | |||
102 | AT3G19280 | fucosyltransferase 11 | ATFUT11, FUCT1, FUCTA, fucosyltransferase 11 |
-0.67 | 0.32 | -0.33 | ||
103 | AT1G29395 | COLD REGULATED 314 INNER MEMBRANE 1 | COLD REGULATED 314 THYLAKOID MEMBRANE 1, COLD REGULATED 314 INNER MEMBRANE 1, cold regulated 414 thylakoid membrane 1 |
-0.67 | 0.29 | -0.32 | ||
104 | AT1G74430 | myb domain protein 95 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 95, ARABIDOPSIS THALIANA MYB DOMAIN CONTAINING PROTEIN 66, myb domain protein 95 |
-0.67 | 0.31 | -0.33 | ||
105 | AT4G22740 | glycine-rich protein | -0.67 | 0.33 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
106 | C0017 | sn-Glycero-3-phosphocholine | sn-Glycero-3-phosphocholine | L-1-Glycero-3-phosphocholine | - | -0.84 | 0.45 | -0.45 |