AT3G17030 : -
Query Information
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AGICode AT3G17030
Description Nucleic acid-binding proteins superfamily
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G17030 Nucleic acid-binding proteins superfamily 1 0.3 -0.32
2 AT1G01370 Histone superfamily protein CENTROMERIC HISTONE H3, HTR12 0.76 0.31 -0.31
3 AT5G47910 respiratory burst oxidase homologue D ATRBOHD, respiratory burst oxidase
homologue D		 -0.76 0.3 -0.32
4 AT2G06050 oxophytodienoate-reductase 3 AtOPR3, DELAYED DEHISCENCE 1,
oxophytodienoate-reductase 3		 -0.75 0.32 -0.32
5 AT2G25735 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.33 -0.32
6 AT1G14120 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.74 0.33 -0.32
7 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 -0.74 0.32 -0.3
8 AT4G30530 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 1 -0.74 0.31 -0.31
9 AT1G11050 Protein kinase superfamily protein -0.74 0.32 -0.31
10 AT2G47250 RNA helicase family protein 0.73 0.32 -0.32
11 AT1G05575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G31945.1); Has 63 Blast hits to 63 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.34 -0.32
12 AT3G11840 plant U-box 24 plant U-box 24 -0.72 0.3 -0.31
13 AT4G30500 Protein of unknown function (DUF788) -0.72 0.32 -0.33
14 AT3G18690 MAP kinase substrate 1 MAP kinase substrate 1 -0.71 0.31 -0.33
15 AT5G47240 nudix hydrolase homolog 8 nudix hydrolase homolog 8, nudix
hydrolase homolog 8		 -0.71 0.34 -0.31
16 AT2G27310 F-box family protein -0.71 0.33 -0.32
17 AT3G04210 Disease resistance protein (TIR-NBS class) -0.71 0.31 -0.31
18 AT1G11310 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 2,
MILDEW RESISTANCE LOCUS O 2,
POWDERY MILDEW RESISTANT 2		 -0.7 0.32 -0.3
19 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.7 0.3 -0.31
20 AT1G67560 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
6, lipoxygenase 6		 -0.7 0.31 -0.33
21 AT2G26530 Protein of unknown function (DUF1645) AR781 -0.7 0.32 -0.33
22 AT5G26990 Drought-responsive family protein -0.69 0.34 -0.31
23 AT1G73500 MAP kinase kinase 9 ATMKK9, MAP kinase kinase 9 -0.69 0.32 -0.32
24 AT5G28740 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.3 -0.33
25 AT5G22250 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 CCR4- associated factor 1b, CCR4-
associated factor 1b		 -0.69 0.31 -0.32
26 AT1G17380 jasmonate-zim-domain protein 5 jasmonate-zim-domain protein 5,
TIFY11A		 -0.69 0.3 -0.31
27 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.69 0.31 -0.31
28 AT5G54170 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.32 -0.32
29 AT3G57450 unknown protein; Has 65 Blast hits to 65 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.3 -0.32
30 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 -0.68 0.31 -0.32
31 AT1G25400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G68440.1); Has 21 Blast hits
to 21 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.3
32 AT5G10695 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.68 0.32 -0.3
33 AT4G33050 calmodulin-binding family protein embryo sac development arrest 39 -0.68 0.32 -0.33
34 AT3G52400 syntaxin of plants 122 ATSYP122, syntaxin of plants 122 -0.68 0.32 -0.31
35 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 0.68 0.31 -0.33
36 AT5G11970 Protein of unknown function (DUF3511) -0.68 0.33 -0.34
37 AT1G59590 ZCF37 ZCF37 -0.68 0.29 -0.32
38 AT2G27580 A20/AN1-like zinc finger family protein -0.67 0.31 -0.32
39 AT1G19670 chlorophyllase 1 chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1,
chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1		 -0.67 0.29 -0.33
40 AT2G32140 transmembrane receptors -0.67 0.3 -0.31
41 AT3G51970 acyl-CoA sterol acyl transferase 1 acyl-CoA sterol acyl transferase
1, ATASAT1, ARABIDOPSIS THALIANA
STEROL O-ACYLTRANSFERASE 1		 -0.67 0.3 -0.31
42 AT2G32030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.67 0.3 -0.32
43 AT2G29210 splicing factor PWI domain-containing protein 0.67 0.31 -0.3
44 AT3G05230 Signal peptidase subunit -0.67 0.31 -0.32
45 AT5G09880 Splicing factor, CC1-like 0.67 0.32 -0.32
46 AT1G76640 Calcium-binding EF-hand family protein -0.66 0.31 -0.31
47 AT1G20510 OPC-8:0 CoA ligase1 OPC-8:0 CoA ligase1 -0.66 0.29 -0.32
48 AT1G63090 phloem protein 2-A11 phloem protein 2-A11, phloem
protein 2-A11		 -0.66 0.31 -0.31
49 AT5G13480 Transducin/WD40 repeat-like superfamily protein FY 0.66 0.31 -0.33
50 AT5G47740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.66 0.32 -0.32
51 AT5G47220 ethylene responsive element binding factor 2 ETHYLENE RESPONSE FACTOR- 2,
ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR 2, ethylene
responsive element binding factor
2		 -0.66 0.33 -0.32
52 AT5G03630 Pyridine nucleotide-disulphide oxidoreductase family
protein		 ATMDAR2 -0.66 0.31 -0.33
53 AT1G73100 SU(VAR)3-9 homolog 3 SET DOMAIN PROTEIN 19, SU(VAR)3-9
homolog 3		 0.65 0.31 -0.3
54 AT5G57510 unknown protein; Has 27 Blast hits to 27 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.33
55 AT1G76650 calmodulin-like 38 calmodulin-like 38 -0.65 0.33 -0.29
56 AT4G23860 PHD finger protein-related 0.65 0.3 -0.32
57 AT5G44530 Subtilase family protein 0.65 0.32 -0.31
58 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE -0.65 0.32 -0.33
59 AT4G14680 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS3 -0.65 0.32 -0.32
60 AT3G05200 RING/U-box superfamily protein ATL6 -0.65 0.33 -0.31
61 AT2G22880 VQ motif-containing protein -0.65 0.32 -0.29
62 AT1G19300 Nucleotide-diphospho-sugar transferases superfamily protein ATGATL1,
GALACTURONOSYLTRANSFERASE-LIKE 1,
GAOLAOZHUANGREN 1, PARVUS		 -0.65 0.32 -0.32
63 AT1G53990 GDSL-motif lipase 3 GDSL-motif lipase 3 -0.65 0.3 -0.33
64 AT2G16980 Major facilitator superfamily protein -0.65 0.31 -0.31
65 AT5G45110 NPR1-like protein 3 ATNPR3, NPR1-like protein 3 -0.65 0.31 -0.32
66 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 -0.65 0.32 -0.31
67 AT2G35510 similar to RCD one 1 similar to RCD one 1 0.65 0.32 -0.32
68 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.65 0.31 -0.31
69 AT1G32640 Basic helix-loop-helix (bHLH) DNA-binding family protein ATMYC2, JASMONATE INSENSITIVE 1,
JASMONATE INSENSITIVE 1, MYC2,
RD22BP1, ZBF1		 -0.65 0.3 -0.31
70 AT1G13210 autoinhibited Ca2+/ATPase II autoinhibited Ca2+/ATPase II -0.64 0.3 -0.31
71 AT4G36500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast
hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.31 -0.31
72 AT5G38510 Rhomboid-related intramembrane serine protease family
protein		 0.64 0.31 -0.33
73 AT1G19340 Methyltransferase MT-A70 family protein 0.64 0.31 -0.29
74 AT1G72450 jasmonate-zim-domain protein 6 jasmonate-zim-domain protein 6,
TIFY DOMAIN PROTEIN 11B		 -0.64 0.3 -0.34
75 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 0.64 0.3 -0.31
76 AT1G62200 Major facilitator superfamily protein AtPTR6, peptide transporter 6 -0.64 0.31 -0.32
77 AT3G44260 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 CCR4- associated factor 1a, CCR4-
associated factor 1a		 -0.64 0.32 -0.33
78 AT4G21990 APS reductase 3 APS reductase 3, ATAPR3, PRH-26,
PAPS REDUCTASE HOMOLOG 26		 -0.64 0.3 -0.3
79 AT2G24550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits
to 219 proteins in 33 species: Archae - 0; Bacteria - 0;
Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.64 0.3 -0.32
80 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.64 0.3 -0.32
81 AT1G03740 Protein kinase superfamily protein -0.64 0.31 -0.3
82 AT2G29090 cytochrome P450, family 707, subfamily A, polypeptide 2 cytochrome P450, family 707,
subfamily A, polypeptide 2		 0.63 0.3 -0.32
83 AT5G54390 HAL2-like HAL2-like, ATAHL, HAL2-like -0.63 0.29 -0.32
84 AT3G61690 nucleotidyltransferases 0.63 0.32 -0.3
85 AT5G08390 Transducin/WD40 repeat-like superfamily protein 0.63 0.31 -0.31
86 AT4G36030 armadillo repeat only 3 armadillo repeat only 3 -0.63 0.31 -0.3
87 AT5G37070 Protein of unknown function, DUF538 -0.63 0.33 -0.31
88 AT2G36650 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.63 0.35 -0.33
89 AT4G15800 ralf-like 33 ralf-like 33 -0.63 0.31 -0.3
90 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 0.63 0.34 -0.3
91 AT4G31800 WRKY DNA-binding protein 18 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 18, WRKY
DNA-binding protein 18		 -0.63 0.32 -0.33
92 AT2G31010 Protein kinase superfamily protein 0.63 0.34 -0.32
93 AT2G23770 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein		 -0.63 0.33 -0.31
94 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase -0.63 0.32 -0.31
95 AT5G60800 Heavy metal transport/detoxification superfamily protein -0.63 0.32 -0.29
96 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.31 -0.32
97 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.62 0.31 -0.29
98 AT5G52120 phloem protein 2-A14 phloem protein 2-A14, phloem
protein 2-A14		 -0.62 0.3 -0.32
99 AT1G76600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
nucleolus, nucleus; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.31
100 AT3G60630 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 2, HAIRY MERISTEM 2, LOST
MERISTEMS 2		 0.62 0.3 -0.3
101 AT1G80840 WRKY DNA-binding protein 40 ATWRKY40, WRKY DNA-binding protein
40		 -0.62 0.31 -0.29
102 AT1G30330 auxin response factor 6 auxin response factor 6 0.62 0.32 -0.31
103 AT1G21100 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 1		 -0.62 0.33 -0.31
104 AT4G16650 O-fucosyltransferase family protein 0.62 0.32 -0.29
105 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.62 0.32 -0.31
106 AT4G02010 Protein kinase superfamily protein 0.62 0.33 -0.31
107 AT5G03280 NRAMP metal ion transporter family protein ATEIN2, CYTOKININ RESISTANT 1,
ETHYLENE INSENSITIVE 2, ENHANCED
RESPONSE TO ABA3, ORESARA 2,
ORESARA 3, PIR2		 0.62 0.31 -0.33
108 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.61 0.3 -0.31
109 AT1G52310 protein kinase family protein / C-type lectin
domain-containing protein		 0.61 0.32 -0.31
110 AT2G39810 ubiquitin-protein ligases HIGH EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 0.61 0.31 -0.33
111 AT3G10070 TBP-associated factor 12 TBP-associated factor 12,
TATA-ASSOCIATED FACTOR II 58		 0.61 0.32 -0.29
112 AT3G58160 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATMYOS3, MYOSIN XI J, MYOSIN A3,
MYOSIN XI-16, XIJ		 0.6 0.34 -0.32
113 AT2G20290 myosin-like protein XIG MYOSIN XI G, myosin-like protein
XIG		 0.6 0.34 -0.33
114 AT3G18524 MUTS homolog 2 ATMSH2, MUTS homolog 2 0.6 0.33 -0.29
115 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 0.6 0.32 -0.34
116 AT2G41050 PQ-loop repeat family protein / transmembrane family
protein		 0.59 0.32 -0.31
117 AT1G52630 O-fucosyltransferase family protein 0.59 0.31 -0.31
118 AT2G18550 homeobox protein 21 homeobox protein 21, homeobox-2,
homeobox protein 21		 0.59 0.31 -0.32
119 AT3G18790 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like
splicing (InterPro:IPR009360); Has 1147 Blast hits to 965
proteins in 236 species: Archae - 12; Bacteria - 13;
Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other
Eukaryotes - 483 (source: NCBI BLink).		 0.59 0.3 -0.3
120 AT1G48110 evolutionarily conserved C-terminal region 7 evolutionarily conserved
C-terminal region 7		 0.58 0.32 -0.33
121 AT1G44780 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G08310.1); Has 18105
Blast hits to 11200 proteins in 808 species: Archae - 37;
Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants -
674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI
BLink).		 0.58 0.34 -0.32
122 AT5G50350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.31 -0.3
123 AT3G26560 ATP-dependent RNA helicase, putative 0.58 0.28 -0.31
124 AT2G21300 ATP binding microtubule motor family protein 0.58 0.34 -0.31
125 AT2G02090 SNF2 domain-containing protein / helicase domain-containing
protein		 CHA19, CHROMATIN REMODELING 19,
ETL1		 0.58 0.3 -0.3
126 AT2G37030 SAUR-like auxin-responsive protein family 0.58 0.33 -0.3