AT3G21720 : isocitrate lyase
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G21720
Description isocitrate lyase
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G21720 isocitrate lyase isocitrate lyase 1 0.32 -0.3
2 AT5G03860 malate synthase malate synthase 0.84 0.33 -0.34
3 AT5G59560 sensitivity to red light reduced protein (SRR1) SENSITIVITY TO RED LIGHT REDUCED 1 0.77 0.32 -0.3
4 AT3G18500 DNAse I-like superfamily protein -0.74 0.31 -0.31
5 AT1G61040 plus-3 domain-containing protein vernalization independence 5 0.72 0.33 -0.3
6 AT2G31040 ATP synthase protein I -related -0.72 0.32 -0.36
7 AT2G32160 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.72 0.31 -0.32
8 AT5G58140 phototropin 2 NON PHOTOTROPIC HYPOCOTYL 1-LIKE,
phototropin 2		 -0.71 0.33 -0.31
9 AT1G03400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.71 0.32 -0.34
10 AT3G14610 cytochrome P450, family 72, subfamily A, polypeptide 7 cytochrome P450, family 72,
subfamily A, polypeptide 7		 0.71 0.31 -0.31
11 AT5G05900 UDP-Glycosyltransferase superfamily protein 0.71 0.32 -0.32
12 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 -0.7 0.31 -0.31
13 AT1G70820 phosphoglucomutase, putative / glucose phosphomutase,
putative		 -0.7 0.33 -0.31
14 AT1G66980 suppressor of npr1-1 constitutive 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 2,
suppressor of npr1-1 constitutive
4		 -0.7 0.32 -0.32
15 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.7 0.29 -0.27
16 AT1G54820 Protein kinase superfamily protein -0.69 0.32 -0.34
17 AT1G61820 beta glucosidase 46 beta glucosidase 46 0.69 0.34 -0.3
18 AT1G74520 HVA22 homologue A HVA22 homologue A, HVA22 homologue
A		 -0.69 0.33 -0.34
19 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.68 0.34 -0.31
20 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 -0.68 0.31 -0.31
21 AT3G28760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate
synthase, prokaryotic-type (InterPro:IPR002812); Has 390
Blast hits to 390 proteins in 131 species: Archae - 144;
Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54;
Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).		 -0.68 0.31 -0.32
22 AT3G01920 DHBP synthase RibB-like alpha/beta domain -0.68 0.32 -0.3
23 AT5G47380 Protein of unknown function, DUF547 -0.68 0.32 -0.32
24 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 0.68 0.32 -0.3
25 AT1G01860 Ribosomal RNA adenine dimethylase family protein PALEFACE 1 -0.67 0.32 -0.31
26 AT2G26570 Plant protein of unknown function (DUF827) WEAK CHLOROPLAST MOVEMENT UNDER
BLUE LIGHT 1		 -0.67 0.3 -0.32
27 AT3G13440 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.31 -0.31
28 AT5G14800 pyrroline-5- carboxylate (P5C) reductase AT-P5C1, PYRROLINE-5- CARBOXYLATE
(P5C) REDUCTASE, EMBRYO DEFECTIVE
2772, pyrroline-5- carboxylate
(P5C) reductase		 0.67 0.3 -0.33
29 AT5G62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-deoxy-D-xylulose 5-phosphate
reductoisomerase,
PIGMENT-DEFECTIVE EMBRYO 129		 -0.66 0.31 -0.33
30 AT3G12650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 31 Blast hits to 31 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.66 0.33 -0.3
31 AT4G33560 Wound-responsive family protein 0.66 0.31 -0.33
32 AT5G61290 Flavin-binding monooxygenase family protein -0.66 0.34 -0.3
33 AT1G75580 SAUR-like auxin-responsive protein family 0.66 0.32 -0.33
34 AT4G28706 pfkB-like carbohydrate kinase family protein -0.66 0.34 -0.34
35 AT3G49900 Phototropic-responsive NPH3 family protein -0.66 0.31 -0.33
36 AT3G21950 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.32 -0.31
37 AT5G03050 unknown protein; Has 33 Blast hits to 33 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.3
38 AT3G59010 pectin methylesterase 61 pectin methylesterase 61 -0.65 0.31 -0.29
39 AT1G76020 Thioredoxin superfamily protein -0.65 0.33 -0.34
40 AT3G59110 Protein kinase superfamily protein -0.65 0.32 -0.3
41 AT2G18390 ADP-ribosylation factor family protein ARF-LIKE 2, ATARLC1, HALLIMASCH,
TITAN 5		 0.65 0.32 -0.32
42 AT4G15570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MAGATAMA 3 0.65 0.32 -0.3
43 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 0.65 0.3 -0.3
44 AT1G33790 jacalin lectin family protein 0.65 0.29 -0.32
45 AT5G16540 zinc finger nuclease 3 zinc finger nuclease 3 -0.65 0.31 -0.35
46 AT2G17850 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.65 0.29 -0.29
47 AT5G58010 LJRHL1-like 3 LJRHL1-like 3 0.65 0.31 -0.3
48 AT1G76620 Protein of unknown function, DUF547 -0.65 0.29 -0.33
49 AT1G67840 chloroplast sensor kinase chloroplast sensor kinase -0.65 0.34 -0.29
50 AT5G52030 TraB family protein -0.65 0.3 -0.3
51 AT4G00490 beta-amylase 2 beta-amylase 2, BETA-AMYLASE 9 -0.64 0.34 -0.32
52 AT2G43860 Pectin lyase-like superfamily protein 0.64 0.3 -0.32
53 AT2G18780 F-box and associated interaction domains-containing protein 0.64 0.32 -0.3
54 AT1G66330 senescence-associated family protein -0.64 0.32 -0.31
55 AT4G08310 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Histone chaperone domain CHZ (InterPro:IPR019098); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G44780.2); Has 53711 Blast hits to 33687 proteins
in 1618 species: Archae - 142; Bacteria - 4400; Metazoa -
24303; Fungi - 6688; Plants - 2484; Viruses - 449; Other
Eukaryotes - 15245 (source: NCBI BLink).		 -0.64 0.31 -0.31
56 AT5G47820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 FRAGILE FIBER 1 -0.64 0.33 -0.3
57 AT4G37820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22795.1); Has 433572 Blast
hits to 177005 proteins in 4263 species: Archae - 2016;
Bacteria - 67591; Metazoa - 157995; Fungi - 49745; Plants -
22011; Viruses - 2192; Other Eukaryotes - 132022 (source:
NCBI BLink).		 -0.64 0.3 -0.33
58 AT4G24900 unknown protein; Has 119 Blast hits to 96 proteins in 40
species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.64 0.31 -0.32
59 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 -0.63 0.3 -0.3
60 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.3 -0.3
61 AT4G32360 Pyridine nucleotide-disulphide oxidoreductase family
protein		 -0.63 0.31 -0.3
62 AT4G08780 Peroxidase superfamily protein 0.63 0.3 -0.31
63 AT2G32860 beta glucosidase 33 beta glucosidase 33 -0.63 0.31 -0.31
64 AT5G60760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.31 -0.33
65 AT1G18360 alpha/beta-Hydrolases superfamily protein -0.63 0.3 -0.32
66 AT1G01640 BTB/POZ domain-containing protein 0.63 0.31 -0.33
67 AT1G27680 ADPGLC-PPase large subunit ADPGLC-PPase large subunit -0.63 0.31 -0.3
68 AT1G76500 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 29, SUPPRESSOR OF PHYB-4#3		 0.63 0.33 -0.31
69 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 -0.63 0.31 -0.3
70 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.31 -0.32
71 AT1G30760 FAD-binding Berberine family protein 0.62 0.32 -0.31
72 AT5G59330 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.3 -0.3
73 AT2G41070 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP12, DPBF4, ENHANCED EM LEVEL 0.62 0.35 -0.32
74 AT3G09980 Family of unknown function (DUF662) -0.61 0.33 -0.33
75 AT4G04370 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.32 -0.33
76 AT5G05090 Homeodomain-like superfamily protein -0.61 0.33 -0.33
77 AT5G45180 Flavin-binding monooxygenase family protein 0.61 0.31 -0.32
78 AT3G46900 copper transporter 2 copper transporter 2 -0.61 0.31 -0.34
79 AT1G09795 ATP phosphoribosyl transferase 2 ATP phosphoribosyl transferase 2,
ATP phosphoribosyl transferase 2,
HISN1B		 -0.61 0.3 -0.3
80 AT3G01510 like SEX4 1 like SEX4 1 -0.61 0.33 -0.33
81 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.3
82 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.33 -0.33
83 AT1G59780 NB-ARC domain-containing disease resistance protein 0.61 0.3 -0.32
84 AT3G51880 high mobility group B1 AtHMGB1, high mobility group B1,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D1		 -0.61 0.3 -0.33
85 AT1G03440 Leucine-rich repeat (LRR) family protein -0.61 0.32 -0.34
86 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 -0.6 0.33 -0.31
87 AT4G03070 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP, AOP1, AOP1.1 -0.6 0.3 -0.3
88 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 0.6 0.32 -0.32
89 AT4G22490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.32 -0.31
90 AT1G32120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like,
plant mobile domain (InterPro:IPR019557), Protein of
unknown function DUF716 (InterPro:IPR006904); BEST
Arabidopsis thaliana protein match is:
Aminotransferase-like, plant mobile domain family protein
(TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins
in 576 species: Archae - 4; Bacteria - 1182; Metazoa -
7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other
Eukaryotes - 4469 (source: NCBI BLink).		 0.6 0.32 -0.31
91 AT3G01550 phosphoenolpyruvate (pep)/phosphate translocator 2 PHOSPHOENOLPYRUVATE
(PEP)/PHOSPHATE TRANSLOCATOR 2,
phosphoenolpyruvate
(pep)/phosphate translocator 2		 -0.6 0.33 -0.32
92 AT1G76730 NagB/RpiA/CoA transferase-like superfamily protein -0.6 0.29 -0.33
93 AT4G39720 VQ motif-containing protein 0.6 0.3 -0.31
94 AT1G33930 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.33 -0.32
95 AT4G36930 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 SPATULA 0.6 0.29 -0.32
96 AT1G02300 Cysteine proteinases superfamily protein -0.6 0.31 -0.32
97 AT1G31690 Copper amine oxidase family protein -0.6 0.32 -0.31
98 AT3G57160 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.31
99 AT3G22231 pathogen and circadian controlled 1 PATHOGEN AND CIRCADIAN CONTROLLED
1		 -0.6 0.31 -0.31
100 AT3G11050 ferritin 2 ferritin 2, ferritin 2 0.59 0.32 -0.31
101 AT3G14510 Polyprenyl synthetase family protein 0.59 0.31 -0.32
102 AT3G55560 AT-hook protein of GA feedback 2 AT-hook protein of GA feedback 2,
AT-hook motif nuclear-localized
protein 15		 0.59 0.3 -0.31
103 AT5G44460 calmodulin like 43 calmodulin like 43 0.59 0.31 -0.32
104 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.59 0.32 -0.32
105 AT4G08690 Sec14p-like phosphatidylinositol transfer family protein 0.59 0.32 -0.35
106 AT1G13590 phytosulfokine 1 precursor phytosulfokine 1 precursor,
phytosulfokine 1 precursor		 0.59 0.3 -0.32
107 AT2G37340 arginine/serine-rich zinc knuckle-containing protein 33 arginine/serine-rich zinc
knuckle-containing protein 33,
ARGININE/SERINE-RICH ZINC
KNUCKLE-CONTAINING PROTEIN 33,
arginine/serine-rich zinc
knuckle-containing protein 33,
arginine/serine-rich zinc
knuckle-containing protein 33		 0.59 0.34 -0.32
108 AT1G28760 Uncharacterized conserved protein (DUF2215) 0.58 0.33 -0.3
109 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.58 0.31 -0.35
110 AT5G01940 eukaryotic translation initiation factor 2B family protein
/ eIF-2B family protein		 0.58 0.32 -0.31
111 AT4G16050 Aminotransferase-like, plant mobile domain family protein 0.58 0.33 -0.33
112 AT1G68320 myb domain protein 62 myb domain protein 62, BW62B,
BW62C, myb domain protein 62		 0.58 0.29 -0.31
113 AT5G65550 UDP-Glycosyltransferase superfamily protein 0.57 0.32 -0.29
114 AT3G48150 anaphase-promoting complex subunit 8 anaphase-promoting complex subunit
8, CDC23		 0.57 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.7 0.46 -0.44 C0107
116 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.67 0.4 -0.44 C0012
117 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		-0.62 0.43 -0.47 C0196