AT3G27550 : -
Query Information
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AGICode AT3G27550
Description RNA-binding CRS1 / YhbY (CRM) domain protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 1 0.3 -0.31
2 AT3G11620 alpha/beta-Hydrolases superfamily protein -0.78 0.3 -0.32
3 AT1G53500 NAD-dependent epimerase/dehydratase family protein ARABIDOPSIS THALIANA
MUCILAGE-MODIFIED 4, ARABIDOPSIS
THALIANA RHAMNOSE BIOSYNTHESIS 2,
MUCILAGE-MODIFIED 4, RHAMNOSE
BIOSYNTHESIS 2		 0.78 0.3 -0.31
4 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.75 0.33 -0.31
5 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.74 0.33 -0.29
6 AT2G47970 Nuclear pore localisation protein NPL4 0.73 0.33 -0.32
7 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.73 0.29 -0.34
8 AT2G20370 Exostosin family protein AtMUR3, KATAMARI 1, MURUS 3 0.73 0.29 -0.31
9 AT4G23040 Ubiquitin-like superfamily protein 0.72 0.29 -0.31
10 AT2G17980 Sec1/munc18-like (SM) proteins superfamily ATSLY1 0.72 0.3 -0.31
11 AT4G01510 Arv1-like protein ARV2 -0.72 0.31 -0.31
12 AT2G21520 Sec14p-like phosphatidylinositol transfer family protein 0.71 0.33 -0.31
13 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.71 0.33 -0.32
14 AT3G29770 methyl esterase 11 ARABIDOPSIS THALIANA METHYL
ESTERASE 11, methyl esterase 11		 -0.71 0.32 -0.31
15 AT1G16730 unknown protein 6 unknown protein 6 -0.7 0.32 -0.33
16 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.7 0.32 -0.31
17 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.7 0.29 -0.33
18 AT5G66200 armadillo repeat only 2 armadillo repeat only 2 0.7 0.31 -0.32
19 AT3G05280 Integral membrane Yip1 family protein 0.7 0.3 -0.31
20 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.69 0.32 -0.32
21 AT2G20210 RNI-like superfamily protein 0.69 0.3 -0.36
22 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.69 0.3 -0.32
23 AT5G05820 Nucleotide-sugar transporter family protein 0.69 0.33 -0.32
24 AT1G54390 PHD finger protein-related INHIBITOR OF GROWTH 2 -0.69 0.32 -0.31
25 AT2G12550 ubiquitin-associated (UBA)/TS-N domain-containing protein homolog of human NUB1 0.68 0.31 -0.29
26 AT3G47120 RNA recognition motif (RRM)-containing protein 0.68 0.31 -0.33
27 AT1G48900 Signal recognition particle, SRP54 subunit protein 0.68 0.32 -0.32
28 AT1G22770 gigantea protein (GI) FB, GIGANTEA 0.68 0.32 -0.31
29 AT5G64710 Putative endonuclease or glycosyl hydrolase 0.68 0.32 -0.3
30 AT2G37140 Terpenoid synthases superfamily protein 0.68 0.32 -0.31
31 AT5G55900 Sucrase/ferredoxin-like family protein -0.67 0.31 -0.3
32 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.67 0.32 -0.3
33 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.67 0.33 -0.32
34 AT4G09570 calcium-dependent protein kinase 4 ATCPK4, calcium-dependent protein
kinase 4		 0.67 0.29 -0.34
35 AT1G49560 Homeodomain-like superfamily protein 0.67 0.32 -0.3
36 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 -0.67 0.32 -0.31
37 AT2G39720 RING-H2 finger C2A RING-H2 finger C2A 0.67 0.32 -0.32
38 AT5G10790 ubiquitin-specific protease 22 ubiquitin-specific protease 22 0.67 0.3 -0.32
39 AT5G65540 unknown protein; Has 6825 Blast hits to 3811 proteins in
289 species: Archae - 0; Bacteria - 184; Metazoa - 2139;
Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes -
2874 (source: NCBI BLink).		 0.66 0.32 -0.32
40 AT2G30690 Protein of unknown function, DUF593 0.66 0.32 -0.32
41 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.29 -0.31
42 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.66 0.29 -0.3
43 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.31 -0.31
44 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 0.66 0.32 -0.3
45 AT4G14900 FRIGIDA-like protein 0.66 0.3 -0.31
46 AT5G62350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.31 -0.31
47 AT3G07020 UDP-Glycosyltransferase superfamily protein sterol glucosyltransferase,
UDP-glucosyl transferase 80A2		 0.65 0.32 -0.31
48 AT2G43160 ENTH/VHS family protein 0.65 0.29 -0.31
49 AT5G62030 diphthamide synthesis DPH2 family protein 0.65 0.3 -0.32
50 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.65 0.31 -0.3
51 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 0.65 0.33 -0.33
52 AT5G28240 transposable element gene 0.65 0.31 -0.32
53 AT5G52420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.31 -0.33
54 AT3G50670 U1 small nuclear ribonucleoprotein-70K U1 small nuclear
ribonucleoprotein-70K, U1SNRNP		 0.64 0.32 -0.31
55 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c 0.64 0.34 -0.32
56 AT1G70630 Nucleotide-diphospho-sugar transferase family protein 0.64 0.3 -0.34
57 AT4G25360 TRICHOME BIREFRINGENCE-LIKE 18 TRICHOME BIREFRINGENCE-LIKE 18 0.64 0.33 -0.33
58 AT3G29400 exocyst subunit exo70 family protein E1 exocyst subunit exo70 family
protein E1, exocyst subunit exo70
family protein E1		 0.64 0.32 -0.3
59 AT3G13672 TRAF-like superfamily protein -0.64 0.3 -0.31
60 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.63 0.3 -0.31
61 AT4G04300 transposable element gene 0.63 0.31 -0.31
62 AT2G33730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.31 -0.31
63 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.32
64 AT4G37790 Homeobox-leucine zipper protein family HAT22 -0.63 0.3 -0.32
65 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.63 0.3 -0.34
66 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.3 -0.3
67 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 -0.63 0.33 -0.35
68 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 0.63 0.31 -0.33
69 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.33 -0.31
70 AT5G47720 Thiolase family protein -0.62 0.31 -0.31
71 AT5G40960 Protein of unknown function (DUF 3339) -0.62 0.3 -0.31
72 AT4G09080 Outer membrane OMP85 family protein TRANSLOCON OUTER MEMBRANE COMPLEX
75-IV, translocon at the outer
envelope membrane of chloroplasts
75-IV		 0.62 0.29 -0.31
73 AT4G15410 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 0.62 0.28 -0.33
74 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.61 0.31 -0.31
75 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.61 0.31 -0.33
76 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 -0.61 0.32 -0.33
77 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.6 0.3 -0.31
78 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.31 -0.29
79 AT1G72990 beta-galactosidase 17 beta-galactosidase 17 -0.6 0.32 -0.32
80 AT4G23660 polyprenyltransferase 1 polyprenyltransferase 1,
polyprenyltransferase 1		 -0.6 0.34 -0.33
81 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.59 0.31 -0.32
82 AT3G60790 F-box family protein -0.58 0.32 -0.31
83 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.55 0.32 -0.32
84 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein -0.54 0.31 -0.33
85 AT1G23880 NHL domain-containing protein -0.54 0.31 -0.33
86 AT4G33440 Pectin lyase-like superfamily protein -0.54 0.3 -0.32
87 AT1G31370 Ubiquitin-specific protease family C19-related protein -0.54 0.28 -0.32
88 AT1G01450 Protein kinase superfamily protein -0.54 0.32 -0.3