AT3G27530 : golgin candidate 6
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G27530
Description golgin candidate 6
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G27530 golgin candidate 6 golgin candidate 6, MAIGO 4 1 0.31 -0.31
2 AT2G19380 RNA recognition motif (RRM)-containing protein -0.75 0.32 -0.32
3 AT1G14570 UBX domain-containing protein 0.69 0.28 -0.31
4 AT5G51720 2 iron, 2 sulfur cluster binding -0.68 0.32 -0.31
5 AT3G47160 RING/U-box superfamily protein 0.67 0.3 -0.32
6 AT5G08600 U3 ribonucleoprotein (Utp) family protein -0.67 0.32 -0.3
7 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 0.65 0.33 -0.31
8 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.31 -0.31
9 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.32
10 AT1G04400 cryptochrome 2 AT-PHH1, ATCRY2, cryptochrome 2,
FHA, PHH1		 0.63 0.34 -0.32
11 AT2G14420 transposable element gene -0.63 0.32 -0.31
12 AT2G21240 basic pentacysteine 4 BASIC PENTACYSTEINE 4, BBR, basic
pentacysteine 4		 0.63 0.33 -0.32
13 AT1G14350 Duplicated homeodomain-like superfamily protein myb domain protein 124, FOUR LIPS,
MYB124		 -0.63 0.32 -0.32
14 AT5G63610 cyclin-dependent kinase E;1 ATCDK8, cyclin-dependent kinase
E;1, HUA ENHANCER 3		 0.63 0.33 -0.3
15 AT3G17770 Dihydroxyacetone kinase 0.63 0.31 -0.3
16 AT4G11860 Protein of unknown function (DUF544) 0.63 0.32 -0.32
17 AT3G10770 Single-stranded nucleic acid binding R3H protein 0.62 0.3 -0.32
18 AT4G13980 winged-helix DNA-binding transcription factor family
protein		 AT-HSFA5, HEAT SHOCK TRANSCRIPTION
FACTOR A5		 0.6 0.29 -0.3
19 AT1G49850 RING/U-box superfamily protein 0.6 0.32 -0.32
20 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 0.6 0.31 -0.3
21 AT2G25900 Zinc finger C-x8-C-x5-C-x3-H type family protein ATCTH, A. THALIANA TANDEM ZINC
FINGER PROTEIN 1		 0.59 0.3 -0.3
22 AT2G24450 FASCICLIN-like arabinogalactan protein 3 precursor FASCICLIN-like arabinogalactan
protein 3 precursor		 -0.58 0.3 -0.31
23 AT3G15450 Aluminium induced protein with YGL and LRDR motifs 0.58 0.31 -0.31
24 AT2G06150 transposable element gene -0.58 0.31 -0.32
25 AT2G39410 alpha/beta-Hydrolases superfamily protein -0.58 0.29 -0.3
26 AT3G22250 UDP-Glycosyltransferase superfamily protein 0.58 0.31 -0.31
27 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 0.58 0.3 -0.35
28 AT3G62980 F-box/RNI-like superfamily protein AtTIR1, TRANSPORT INHIBITOR
RESPONSE 1		 0.58 0.32 -0.31
29 AT2G40300 ferritin 4 ferritin 4, ferritin 4 -0.58 0.31 -0.32
30 AT1G34750 Protein phosphatase 2C family protein -0.58 0.31 -0.34
31 AT1G70250 receptor serine/threonine kinase, putative -0.57 0.3 -0.32
32 AT3G60030 squamosa promoter-binding protein-like 12 squamosa promoter-binding
protein-like 12		 0.57 0.31 -0.31
33 AT1G19510 RAD-like 5 RAD-like 5, RAD-like 5,
RADIALIS-LIKE SANT/MYB 4		 0.57 0.33 -0.3
34 AT3G48710 DEK domain-containing chromatin associated protein 0.57 0.32 -0.31
35 AT1G68490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast
hits to 125 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.29
36 AT2G48080 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.56 0.3 -0.33
37 AT1G51850 Leucine-rich repeat protein kinase family protein -0.56 0.33 -0.3
38 AT3G21600 Senescence/dehydration-associated protein-related 0.56 0.32 -0.3
39 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.32 -0.32
40 AT1G47660 unknown protein; Has 5165 Blast hits to 2753 proteins in
450 species: Archae - 12; Bacteria - 1193; Metazoa - 731;
Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes
- 1931 (source: NCBI BLink).		 -0.56 0.33 -0.29
41 AT3G20310 ethylene response factor 7 ATERF-7, ATERF7, ethylene response
factor 7		 0.56 0.32 -0.33
42 AT1G55915 zinc ion binding -0.55 0.33 -0.33
43 AT5G03920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03930.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.55 0.31 -0.31
44 AT2G31700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.31 -0.33
45 AT4G27060 ARM repeat superfamily protein CONVOLUTA, SPIRAL 2, TORTIFOLIA 1 0.55 0.3 -0.32
46 AT1G53980 Ubiquitin-like superfamily protein 0.55 0.31 -0.3
47 AT1G66620 Protein with RING/U-box and TRAF-like domains -0.55 0.32 -0.28
48 AT3G45730 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.31 -0.33
49 AT3G53030 ser/arg-rich protein kinase 4 ser/arg-rich protein kinase 4 0.55 0.3 -0.31
50 AT3G08550 elongation defective 1 protein / ELD1 protein ABA INSENSITIVE 8, ELONGATION
DEFECTIVE 1, KOBITO		 0.54 0.32 -0.31
51 AT4G33310 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.33 -0.31
52 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.53 0.34 -0.32
53 AT3G21650 Protein phosphatase 2A regulatory B subunit family protein 0.53 0.31 -0.33
54 AT4G05510 transposable element gene 0.53 0.29 -0.34
55 AT4G20000 VQ motif-containing protein -0.52 0.31 -0.33
56 AT3G52620 unknown protein; Has 11 Blast hits to 11 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.3 -0.33
57 AT1G04100 indoleacetic acid-induced protein 10 indoleacetic acid-induced protein
10		 -0.51 0.29 -0.33
58 AT1G58290 Glutamyl-tRNA reductase family protein Arabidopsis thaliana hemA 1, HEMA1 -0.51 0.3 -0.3
59 AT3G42680 transposable element gene -0.51 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
60 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.74 0.46 -0.44 C0073
61 C0026 2-Hydroxyisobutyric acid - - β oxidation 0.69 0.43 -0.43
62 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.68 0.43 -0.45 C0099
63 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.66 0.44 -0.46
64 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.63 0.44 -0.46 C0027