AT3G19440 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G19440
Description Pseudouridine synthase family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G19440 Pseudouridine synthase family protein 1 0.31 -0.3
2 AT5G41190 CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)
Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA
nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.84 0.33 -0.31
3 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.83 0.31 -0.31
4 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.82 0.33 -0.32
5 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.81 0.33 -0.3
6 AT1G75670 DNA-directed RNA polymerases 0.8 0.3 -0.33
7 AT1G79150 binding 0.79 0.34 -0.31
8 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.3 -0.31
9 AT3G13940 DNA binding;DNA-directed RNA polymerases 0.78 0.32 -0.32
10 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.78 0.31 -0.31
11 AT3G15460 Ribosomal RNA processing Brix domain protein 0.78 0.32 -0.32
12 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 0.78 0.31 -0.33
13 AT3G21540 transducin family protein / WD-40 repeat family protein 0.78 0.31 -0.31
14 AT2G40420 Transmembrane amino acid transporter family protein -0.77 0.31 -0.31
15 AT5G38890 Nucleic acid-binding, OB-fold-like protein 0.77 0.33 -0.32
16 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.75 0.31 -0.32
17 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.75 0.31 -0.32
18 AT5G50315 transposable element gene 0.75 0.32 -0.31
19 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.31 -0.3
20 AT1G30960 GTP-binding family protein 0.75 0.34 -0.31
21 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.31
22 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 -0.74 0.3 -0.31
23 AT5G66540 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: cytosol, nucleolus, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U3 small
nucleolar ribonucleoprotein complex, subunit Mpp10p
(InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.73 0.3 -0.34
24 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.73 0.3 -0.31
25 AT4G04190 unknown protein; Has 35 Blast hits to 35 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.73 0.32 -0.31
26 AT1G64600 methyltransferases;copper ion binding 0.73 0.33 -0.32
27 AT2G03670 cell division cycle 48B cell division cycle 48B 0.72 0.31 -0.3
28 AT3G07350 Protein of unknown function (DUF506) -0.72 0.3 -0.33
29 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 0.72 0.29 -0.31
30 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.72 0.31 -0.32
31 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 0.72 0.3 -0.32
32 AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.32 -0.33
33 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.71 0.32 -0.33
34 AT4G35030 Protein kinase superfamily protein 0.71 0.29 -0.3
35 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.31 -0.3
36 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.71 0.31 -0.33
37 AT5G09840 Putative endonuclease or glycosyl hydrolase 0.7 0.3 -0.32
38 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 -0.7 0.31 -0.32
39 AT3G52060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.69 0.3 -0.32
40 AT1G10150 Carbohydrate-binding protein -0.68 0.32 -0.31
41 AT4G18020 CheY-like two-component responsive regulator family protein APRR2, PSEUDO-RESPONSE REGULATOR 2 -0.66 0.31 -0.3
42 AT5G03230 Protein of unknown function, DUF584 -0.66 0.32 -0.31
43 AT2G18670 RING/U-box superfamily protein -0.65 0.31 -0.28
44 AT1G57870 shaggy-like kinase 42 shaggy-like kinase 42, shaggy-like
kinase 42		 -0.64 0.32 -0.31
45 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.63 0.32 -0.32
46 AT3G59940 Galactose oxidase/kelch repeat superfamily protein -0.62 0.31 -0.31
47 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 -0.62 0.32 -0.31
48 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.61 0.3 -0.32
49 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.3 -0.31
50 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.61 0.3 -0.33
51 AT1G51680 4-coumarate:CoA ligase 1 4-COUMARATE:COA LIGASE 1,
4-coumarate:CoA ligase 1,
ARABIDOPSIS THALIANA
4-COUMARATE:COA LIGASE 1		 -0.61 0.33 -0.32
52 AT3G44950 glycine-rich protein -0.6 0.31 -0.29
53 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 -0.6 0.33 -0.34
54 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 -0.59 0.31 -0.31
55 AT1G26920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69760.1); Has 47 Blast hits
to 47 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 7; Plants - 34; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 -0.59 0.29 -0.34
56 AT4G27670 heat shock protein 21 heat shock protein 21 -0.58 0.33 -0.31