AT3G19380 : plant U-box 25
Query Information
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AGICode AT3G19380
Description plant U-box 25
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G19380 plant U-box 25 plant U-box 25 1 0.32 -0.33
2 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE 0.72 0.33 -0.3
3 AT1G02660 alpha/beta-Hydrolases superfamily protein 0.69 0.32 -0.31
4 AT5G67250 SKP1/ASK1-interacting protein 2 SKP1/ASK1-interacting protein 2,
VIER F-BOX PROTEINE 4		 0.69 0.32 -0.34
5 AT5G11920 6-&1-fructan exohydrolase 6-&1-fructan exohydrolase,
6-&1-fructan exohydrolase		 -0.69 0.31 -0.31
6 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.68 0.29 -0.29
7 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 0.67 0.3 -0.32
8 AT5G16120 alpha/beta-Hydrolases superfamily protein 0.67 0.32 -0.29
9 AT5G19980 golgi nucleotide sugar transporter 4 golgi nucleotide sugar transporter
4		 -0.67 0.32 -0.32
10 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 0.66 0.31 -0.34
11 AT3G49810 ARM repeat superfamily protein 0.66 0.29 -0.32
12 AT5G58720 smr (Small MutS Related) domain-containing protein 0.66 0.31 -0.29
13 AT1G01110 IQ-domain 18 IQ-domain 18 0.66 0.32 -0.31
14 AT4G28703 RmlC-like cupins superfamily protein 0.66 0.33 -0.33
15 AT5G07830 glucuronidase 2 glucuronidase 2, glucuronidase 2 -0.65 0.29 -0.34
16 AT5G56980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.65 0.3 -0.32
17 AT3G51110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.32 -0.3
18 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 -0.64 0.33 -0.32
19 AT1G67530 ARM repeat superfamily protein 0.64 0.33 -0.33
20 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 0.64 0.29 -0.32
21 AT5G55700 beta-amylase 4 beta-amylase 4, BETA-AMYLASE 6 0.64 0.33 -0.31
22 AT1G51790 Leucine-rich repeat protein kinase family protein -0.64 0.3 -0.3
23 AT5G12980 Cell differentiation, Rcd1-like protein -0.64 0.31 -0.31
24 AT2G26700 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 PINOID2 0.63 0.33 -0.32
25 AT4G37260 myb domain protein 73 ATMYB73, myb domain protein 73 0.63 0.32 -0.33
26 AT2G46260 BTB/POZ/Kelch-associated protein 0.63 0.31 -0.34
27 AT4G09460 myb domain protein 6 myb domain protein 6, myb domain
protein 6		 0.63 0.31 -0.31
28 AT2G18700 trehalose phosphatase/synthase 11 trehalose phosphatase/synthase 11,
ATTPSB, trehalose
phosphatase/synthase 11,
TREHALOSE-6-PHOSPHATE SYNTHASE 11		 0.63 0.32 -0.32
29 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 -0.62 0.32 -0.3
30 AT1G51850 Leucine-rich repeat protein kinase family protein -0.62 0.31 -0.31
31 AT2G46420 Plant protein 1589 of unknown function -0.62 0.31 -0.36
32 AT5G19420 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.62 0.29 -0.3
33 AT3G57880 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.62 0.31 -0.33
34 AT3G20310 ethylene response factor 7 ATERF-7, ATERF7, ethylene response
factor 7		 0.62 0.34 -0.34
35 AT3G27170 chloride channel B ATCLC-B, chloride channel B -0.61 0.33 -0.33
36 AT1G51800 Leucine-rich repeat protein kinase family protein IMPAIRED OOMYCETE SUSCEPTIBILITY 1 -0.61 0.32 -0.32
37 AT3G52500 Eukaryotic aspartyl protease family protein -0.61 0.31 -0.31
38 AT3G06380 tubby-like protein 9 tubby-like protein 9, tubby-like
protein 9		 0.6 0.32 -0.31
39 AT3G10020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 47 Blast hits to 47 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.3
40 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.32 -0.28
41 AT1G55910 zinc transporter 11 precursor zinc transporter 11 precursor -0.6 0.33 -0.3
42 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 -0.6 0.3 -0.31
43 AT2G06510 replication protein A 1A ARABIDOPSIS THALIANA REPLICATION
PROTEIN A 1A, ARABIDOPSIS THALIANA
RPA70-KDA SUBUNIT A, replication
protein A 1A, RPA70-KDA SUBUNIT A		 0.59 0.32 -0.31
44 AT5G37310 Endomembrane protein 70 protein family -0.59 0.33 -0.32
45 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 0.59 0.3 -0.32
46 AT5G63190 MA3 domain-containing protein 0.59 0.32 -0.32
47 AT1G80440 Galactose oxidase/kelch repeat superfamily protein 0.59 0.32 -0.31
48 AT5G53110 RING/U-box superfamily protein -0.58 0.33 -0.31
49 AT2G29120 glutamate receptor 2.7 glutamate receptor 2.7, GLUTAMATE
RECEPTOR 2.7, glutamate receptor
2.7		 -0.58 0.32 -0.33
50 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.58 0.29 -0.3
51 AT1G17790 DNA-binding bromodomain-containing protein 0.58 0.31 -0.32
52 AT3G48710 DEK domain-containing chromatin associated protein 0.58 0.31 -0.31
53 AT3G11730 Ras-related small GTP-binding family protein ATFP8, ARABIDOPSIS THALIANA RAB
GTPASE HOMOLOG D1, RAB GTPASE
HOMOLOG D1		 0.58 0.32 -0.33
54 AT3G62980 F-box/RNI-like superfamily protein AtTIR1, TRANSPORT INHIBITOR
RESPONSE 1		 0.58 0.31 -0.33
55 AT4G15120 VQ motif-containing protein 0.58 0.34 -0.28
56 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.32 -0.33
57 AT2G41700 ATP-binding cassette A1 ATP-binding cassette A1,
Arabidopsis thaliana ATP-binding
cassette A1		 -0.57 0.32 -0.31
58 AT3G02910 AIG2-like (avirulence induced gene) family protein -0.57 0.3 -0.31
59 AT3G62950 Thioredoxin superfamily protein 0.57 0.3 -0.33
60 AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein AKINBETA1 0.57 0.31 -0.32
61 AT3G61060 phloem protein 2-A13 phloem protein 2-A13, phloem
protein 2-A13		 0.57 0.3 -0.33
62 AT1G13460 Protein phosphatase 2A regulatory B subunit family protein -0.56 0.33 -0.32
63 AT2G25900 Zinc finger C-x8-C-x5-C-x3-H type family protein ATCTH, A. THALIANA TANDEM ZINC
FINGER PROTEIN 1		 0.56 0.32 -0.3
64 AT1G51890 Leucine-rich repeat protein kinase family protein -0.56 0.33 -0.29
65 AT3G50570 hydroxyproline-rich glycoprotein family protein -0.56 0.32 -0.31
66 AT3G46280 protein kinase-related -0.56 0.27 -0.33
67 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily -0.56 0.34 -0.33
68 AT5G44820 Nucleotide-diphospho-sugar transferase family protein -0.56 0.35 -0.33
69 AT1G60980 gibberellin 20-oxidase 4 gibberellin 20-oxidase 4,
gibberellin 20-oxidase 4		 -0.56 0.3 -0.31
70 AT1G70230 TRICHOME BIREFRINGENCE-LIKE 27 ALTERED XYLOGLUCAN 4, TRICHOME
BIREFRINGENCE-LIKE 27		 -0.55 0.31 -0.33
71 AT1G56010 NAC domain containing protein 1 Arabidopsis NAC domain containing
protein 21, Arabidopsis NAC domain
containing protein 22, NAC domain
containing protein 1		 -0.55 0.31 -0.33
72 AT5G60450 auxin response factor 4 auxin response factor 4 -0.55 0.33 -0.32
73 AT2G18790 phytochrome B HY3, OUT OF PHASE 1, phytochrome B -0.54 0.31 -0.31
74 AT5G08360 Protein of unknown function (DUF789) -0.54 0.29 -0.32
75 AT1G67490 glucosidase 1 glucosidase 1, KNOPF -0.54 0.31 -0.3
76 AT4G26940 Galactosyltransferase family protein -0.54 0.34 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		0.7 0.44 -0.44 C0210
78 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.66 0.46 -0.43 C0011
79 C0002 α-Lipoic acid (+/-)-α-Lipoic acid Lipoate cofactor of fatty acid biosynthesis 0.62 0.43 -0.45 C0002
80 C0229 Robinin - - flavone biosynthesis 0.58 0.43 -0.41