AT3G25970 : -
Query Information
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AGICode AT3G25970
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.31
2 AT4G36020 cold shock domain protein 1 cold shock domain protein 1 0.74 0.31 -0.28
3 AT5G13890 Family of unknown function (DUF716) 0.73 0.31 -0.31
4 AT4G31820 Phototropic-responsive NPH3 family protein ENHANCER OF PINOID, MACCHI-BOU 4,
NAKED PINS IN YUC MUTANTS 1		 -0.71 0.35 -0.31
5 AT1G64220 translocase of outer membrane 7 kDa subunit 2 translocase of outer membrane 7
kDa subunit 2		 0.7 0.3 -0.3
6 AT3G27390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast
hits to 99 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.33
7 AT2G15640 F-box family protein -0.69 0.32 -0.31
8 AT1G19715 Mannose-binding lectin superfamily protein -0.68 0.31 -0.34
9 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.68 0.34 -0.31
10 AT5G66420 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP033271 (InterPro:IPR008322), TIM-barrel signal
transduction protein, predicted (InterPro:IPR009215); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.68 0.33 -0.32
11 AT1G62250 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 15 growth stages; Has
30 Blast hits to 30 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.32
12 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.31 -0.32
13 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.68 0.3 -0.35
14 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.68 0.31 -0.31
15 AT1G27690 Protein of unknown function (DUF620) -0.68 0.29 -0.31
16 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.3 -0.32
17 AT5G36230 ARM repeat superfamily protein 0.67 0.33 -0.3
18 AT3G06210 ARM repeat superfamily protein -0.67 0.34 -0.33
19 AT1G64185 Lactoylglutathione lyase / glyoxalase I family protein 0.67 0.32 -0.31
20 AT1G80670 Transducin/WD40 repeat-like superfamily protein RNA export factor 1 0.67 0.32 -0.31
21 AT3G16110 PDI-like 1-6 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 4, PDI-like
1-6, PROTEIN DISULFIDE ISOMERASE
4, PDI-like 1-6		 0.67 0.31 -0.33
22 AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 9,
nine-cis-epoxycarotenoid
dioxygenase 9		 0.67 0.32 -0.32
23 AT3G06990 Cysteine/Histidine-rich C1 domain family protein 0.66 0.3 -0.33
24 AT1G69350 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.31 -0.33
25 AT4G01280 Homeodomain-like superfamily protein -0.65 0.31 -0.32
26 AT2G15630 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.33 -0.31
27 AT5G10920 L-Aspartase-like family protein 0.65 0.29 -0.31
28 AT1G64910 UDP-Glycosyltransferase superfamily protein 0.64 0.3 -0.32
29 AT5G11640 Thioredoxin superfamily protein 0.64 0.33 -0.32
30 AT1G61870 pentatricopeptide repeat 336 pentatricopeptide repeat 336 0.64 0.32 -0.31
31 AT1G05410 Protein of unknown function (DUF1423) 0.64 0.32 -0.33
32 AT5G61880 Protein Transporter, Pam16 0.64 0.34 -0.33
33 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.31 -0.31
34 AT3G08980 Peptidase S24/S26A/S26B/S26C family protein 0.64 0.31 -0.32
35 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 0.63 0.29 -0.32
36 AT5G40200 DegP protease 9 DegP protease 9 0.63 0.31 -0.32
37 AT4G09600 GAST1 protein homolog 3 GAST1 protein homolog 3 -0.63 0.3 -0.33
38 AT4G31450 RING/U-box superfamily protein -0.62 0.3 -0.32
39 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.62 0.34 -0.31
40 AT4G22840 Sodium Bile acid symporter family -0.62 0.3 -0.31
41 AT3G46810 Cysteine/Histidine-rich C1 domain family protein 0.62 0.32 -0.32
42 AT4G35335 Nucleotide-sugar transporter family protein 0.62 0.31 -0.3
43 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.61 0.31 -0.33
44 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.31 -0.32
45 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.6 0.3 -0.32
46 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 -0.6 0.33 -0.32
47 AT1G47920 RNI-like superfamily protein 0.6 0.31 -0.31
48 AT4G38880 GLN phosphoribosyl pyrophosphate amidotransferase 3 GLN phosphoribosyl pyrophosphate
amidotransferase 3, GLN
phosphoribosyl pyrophosphate
amidotransferase 3		 0.6 0.31 -0.31
49 AT1G15830 unknown protein; Has 165982 Blast hits to 57214 proteins in
2459 species: Archae - 263; Bacteria - 44622; Metazoa -
55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other
Eukaryotes - 34550 (source: NCBI BLink).		 -0.6 0.32 -0.33
50 AT1G79540 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.33 -0.29
51 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.29 -0.32
52 AT3G43220 Phosphoinositide phosphatase family protein -0.6 0.31 -0.33
53 AT1G02120 GRAM domain family protein VASCULAR ASSOCIATED DEATH1 -0.6 0.32 -0.32
54 AT1G09220 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.33 -0.31
55 AT2G26410 IQ-domain 4 IQ-domain 4 0.6 0.3 -0.31
56 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 -0.59 0.31 -0.32
57 AT1G41900 transposable element gene -0.59 0.3 -0.31
58 AT3G53570 FUS3-complementing gene 1 FUS3-complementing gene 1, AME2,
FUS3-complementing gene 1		 -0.59 0.29 -0.32
59 AT3G42060 myosin heavy chain-related -0.59 0.31 -0.28
60 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 -0.59 0.32 -0.31
61 AT3G23160 Protein of unknown function (DUF668) -0.58 0.31 -0.32
62 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 -0.58 0.3 -0.31
63 AT1G55250 histone mono-ubiquitination 2 histone mono-ubiquitination 2 -0.57 0.31 -0.29
64 AT3G49340 Cysteine proteinases superfamily protein -0.57 0.29 -0.33
65 AT1G54040 epithiospecifier protein epithiospecifier protein,
EPITHIOSPECIFYING SENESCENCE
REGULATOR, TASTY		 -0.57 0.32 -0.31
66 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.31
67 AT1G27520 Glycosyl hydrolase family 47 protein -0.57 0.32 -0.31
68 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 -0.56 0.31 -0.32
69 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.56 0.29 -0.29
70 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 -0.56 0.32 -0.35
71 AT1G52920 G protein coupled receptor G-PROTEIN COUPLED RECEPTOR 2, G
protein coupled receptor		 -0.56 0.33 -0.3
72 AT3G48120 unknown protein; Has 22990 Blast hits to 12942 proteins in
666 species: Archae - 8; Bacteria - 739; Metazoa - 13803;
Fungi - 2465; Plants - 1363; Viruses - 116; Other
Eukaryotes - 4496 (source: NCBI BLink).		 -0.55 0.3 -0.31
73 AT5G26610 D111/G-patch domain-containing protein -0.55 0.3 -0.3
74 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 -0.55 0.32 -0.33
75 AT3G14470 NB-ARC domain-containing disease resistance protein -0.55 0.34 -0.33
76 AT4G32440 Plant Tudor-like RNA-binding protein -0.55 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0127 Isorhamnetin-hexosyl-rhamnoside - - - 0.65 0.43 -0.45