AT3G25990 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G25990
Description Homeodomain-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G25990 Homeodomain-like superfamily protein 1 0.3 -0.31
2 AT5G17560 BolA-like family protein -0.71 0.31 -0.31
3 AT3G01120 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 AtCGS1, A. thaliana cystathionine
gamma-synthetase 1, CYSTATHIONINE
GAMMA-SYNTHASE, CYSTATHIONINE
GAMMA-SYNTHASE 1, METHIONINE
OVERACCUMULATION 1		 -0.71 0.33 -0.31
4 AT2G20140 AAA-type ATPase family protein regulatory particle AAA-ATPase 2b -0.7 0.32 -0.3
5 AT5G46790 PYR1-like 1 PYR1-like 1, regulatory components
of ABA receptor 12		 -0.7 0.34 -0.33
6 AT5G19760 Mitochondrial substrate carrier family protein -0.7 0.31 -0.3
7 AT2G21195 unknown protein; Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.31 -0.28
8 AT5G15350 early nodulin-like protein 17 AtENODL17, early nodulin-like
protein 17		 -0.68 0.3 -0.33
9 AT2G22370 unknown protein; Has 127 Blast hits to 127 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.67 0.32 -0.32
10 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 -0.67 0.31 -0.29
11 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.67 0.3 -0.31
12 AT5G62980 Dihydroneopterin aldolase FOLB2 -0.67 0.32 -0.32
13 AT3G19460 Reticulon family protein -0.66 0.33 -0.33
14 AT1G65920 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.66 0.32 -0.33
15 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 -0.66 0.3 -0.32
16 AT2G42900 Plant basic secretory protein (BSP) family protein -0.66 0.31 -0.33
17 AT2G18910 hydroxyproline-rich glycoprotein family protein -0.66 0.31 -0.33
18 AT4G00810 60S acidic ribosomal protein family -0.66 0.33 -0.32
19 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A		 -0.65 0.31 -0.31
20 AT1G60660 cytochrome B5-like protein ARABIDOPSIS CYTOCHROME B5-LIKE
PROTEIN, B5 #5, cytochrome B5-like
protein		 -0.65 0.31 -0.3
21 AT1G23480 cellulose synthase-like A3 cellulose synthase-like A3,
ATCSLA3, CSLA03, cellulose
synthase-like A3, CELLULOSE
SYNTHASE-LIKE A3		 -0.65 0.32 -0.29
22 AT5G49010 DNA replication protein-related EMBRYO DEFECTIVE 2812, SYNTHETIC
LETHALITY WITH DPB11-1 5		 -0.65 0.33 -0.32
23 AT3G05000 Transport protein particle (TRAPP) component -0.65 0.31 -0.34
24 AT5G06770 KH domain-containing protein / zinc finger (CCCH type)
family protein		 -0.65 0.31 -0.31
25 AT1G69620 ribosomal protein L34 ribosomal protein L34 -0.64 0.31 -0.32
26 AT5G24650 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.64 0.33 -0.3
27 AT2G40010 Ribosomal protein L10 family protein -0.64 0.32 -0.31
28 AT3G22380 time for coffee TIME FOR COFFEE 0.64 0.3 -0.3
29 AT1G13320 protein phosphatase 2A subunit A3 protein phosphatase 2A subunit A3 -0.64 0.32 -0.31
30 AT2G27030 calmodulin 5 ACAM-2, calmodulin 5 -0.64 0.31 -0.34
31 AT4G29430 ribosomal protein S15A E ribosomal protein S15A E -0.63 0.3 -0.31
32 AT1G12310 Calcium-binding EF-hand family protein -0.63 0.32 -0.3
33 AT3G09820 adenosine kinase 1 adenosine kinase 1, ATADK1 -0.63 0.32 -0.32
34 AT5G32450 RNA binding (RRM/RBD/RNP motifs) family protein -0.63 0.31 -0.32
35 AT5G40980 Protein of unknown function (DUF 3339) -0.63 0.33 -0.31
36 AT1G05430 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.3 -0.34
37 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.3 -0.3
38 AT1G21070 Nucleotide-sugar transporter family protein -0.62 0.32 -0.32
39 AT5G18610 Protein kinase superfamily protein 0.62 0.32 -0.34
40 AT3G07950 rhomboid protein-related -0.62 0.33 -0.34
41 AT2G25870 haloacid dehalogenase-like hydrolase family protein -0.62 0.3 -0.33
42 AT1G66830 Leucine-rich repeat protein kinase family protein 0.62 0.33 -0.32
43 AT4G37380 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.3 -0.31
44 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 -0.62 0.31 -0.32
45 AT1G15390 peptide deformylase 1A ATDEF1, peptide deformylase 1A -0.62 0.32 -0.31
46 AT5G44450 methyltransferases -0.62 0.32 -0.32
47 AT1G56260 unknown protein; Has 32 Blast hits to 32 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 MERISTEM DISORGANIZATION 1 -0.62 0.32 -0.31
48 AT2G05755 Nodulin MtN21 /EamA-like transporter family protein -0.62 0.31 -0.35
49 AT3G21200 proton gradient regulation 7 proton gradient regulation 7 -0.61 0.31 -0.33
50 AT1G78780 pathogenesis-related family protein 0.61 0.31 -0.33
51 AT4G35490 mitochondrial ribosomal protein L11 mitochondrial ribosomal protein
L11		 -0.61 0.32 -0.32
52 AT5G47435 formyltetrahydrofolate deformylase, putative -0.61 0.31 -0.32
53 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 -0.61 0.3 -0.29
54 AT4G35000 ascorbate peroxidase 3 ascorbate peroxidase 3 -0.61 0.33 -0.33
55 AT3G57785 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits
to 121 proteins in 51 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.61 0.32 -0.32
56 AT1G53110 BEST Arabidopsis thaliana protein match is: proton pump
interactor 2 (TAIR:AT3G15340.1); Has 9980 Blast hits to
7312 proteins in 825 species: Archae - 146; Bacteria -
1301; Metazoa - 3338; Fungi - 830; Plants - 588; Viruses -
42; Other Eukaryotes - 3735 (source: NCBI BLink).		 0.61 0.31 -0.31
57 AT2G18030 Peptide methionine sulfoxide reductase family protein -0.61 0.31 -0.31
58 AT1G30120 pyruvate dehydrogenase E1 beta pyruvate dehydrogenase E1 beta -0.61 0.32 -0.32
59 AT5G52220 CONTAINS InterPro DOMAIN/s: Chromosome transmission
fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits
to 127 proteins in 63 species: Archae - 0; Bacteria - 0;
Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other
Eukaryotes - 9 (source: NCBI BLink).		 -0.61 0.32 -0.31
60 AT5G15100 Auxin efflux carrier family protein PIN-FORMED 8, PIN-FORMED 8 -0.61 0.33 -0.31
61 AT2G26260 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 2,
3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 2		 -0.6 0.32 -0.3
62 AT3G53580 diaminopimelate epimerase family protein -0.6 0.31 -0.31
63 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 -0.6 0.31 -0.33
64 AT1G67920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits
to 22 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.31
65 AT3G04270 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.33 -0.33
66 AT5G65500 U-box domain-containing protein kinase family protein 0.58 0.31 -0.31
67 AT1G55590 RNI-like superfamily protein 0.57 0.29 -0.33
68 AT5G27320 alpha/beta-Hydrolases superfamily protein ATGID1C, GA INSENSITIVE DWARF1C 0.57 0.31 -0.33
69 AT5G14550 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.57 0.29 -0.33
70 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.3 -0.3
71 AT4G28040 nodulin MtN21 /EamA-like transporter family protein 0.57 0.31 -0.31
72 AT5G57340 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.55 0.31 -0.31
73 AT5G47940 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.28 -0.31
74 AT2G48110 reduced epidermal fluorescence 4 MED33B, REDUCED EPIDERMAL
FLUORESCENCE 4		 0.53 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		0.69 0.32 -0.32 C0189
76 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		0.63 0.44 -0.46 C0267
77 C0230 Rutin - - polyphenol biosynthesis 0.61 0.44 -0.45