AT3G25920 : ribosomal protein L15
Query Information
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AGICode AT3G25920
Description ribosomal protein L15
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G25920 ribosomal protein L15 ribosomal protein L15 1 0.32 -0.3
2 AT5G65220 Ribosomal L29 family protein 0.97 0.33 -0.31
3 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.97 0.33 -0.33
4 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.97 0.32 -0.31
5 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.97 0.29 -0.32
6 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.96 0.32 -0.32
7 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.96 0.31 -0.31
8 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.96 0.32 -0.32
9 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.96 0.29 -0.32
10 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.96 0.31 -0.32
11 AT1G53520 Chalcone-flavanone isomerase family protein 0.96 0.32 -0.33
12 AT3G13120 Ribosomal protein S10p/S20e family protein 0.96 0.33 -0.32
13 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.96 0.31 -0.34
14 AT3G54210 Ribosomal protein L17 family protein 0.95 0.33 -0.31
15 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.95 0.32 -0.36
16 AT2G33450 Ribosomal L28 family 0.95 0.3 -0.32
17 AT4G17560 Ribosomal protein L19 family protein 0.95 0.3 -0.31
18 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.95 0.31 -0.31
19 AT2G43030 Ribosomal protein L3 family protein 0.95 0.34 -0.34
20 AT1G14270 CAAX amino terminal protease family protein 0.95 0.3 -0.3
21 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.95 0.31 -0.34
22 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.94 0.3 -0.31
23 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.94 0.3 -0.34
24 AT5G47190 Ribosomal protein L19 family protein 0.94 0.31 -0.3
25 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.94 0.32 -0.33
26 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.94 0.31 -0.33
27 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.94 0.3 -0.32
28 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.94 0.3 -0.32
29 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.94 0.31 -0.33
30 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.94 0.3 -0.3
31 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.93 0.31 -0.33
32 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.93 0.31 -0.3
33 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.93 0.31 -0.33
34 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.93 0.31 -0.31
35 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.93 0.31 -0.32
36 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.93 0.31 -0.33
37 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.93 0.32 -0.33
38 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.93 0.32 -0.31
39 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.93 0.33 -0.3
40 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.93 0.32 -0.31
41 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.93 0.33 -0.34
42 AT2G18710 SECY homolog 1 SECY homolog 1 0.93 0.31 -0.3
43 AT5G52970 thylakoid lumen 15.0 kDa protein 0.93 0.31 -0.31
44 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.93 0.3 -0.34
45 AT5G18660 NAD(P)-binding Rossmann-fold superfamily protein PALE-GREEN AND CHLOROPHYLL B
REDUCED 2		 0.92 0.32 -0.32
46 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.92 0.3 -0.34
47 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.92 0.32 -0.33
48 AT3G12930 Lojap-related protein 0.92 0.31 -0.33
49 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.92 0.34 -0.34
50 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.92 0.3 -0.32
51 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.92 0.31 -0.3
52 AT1G44575 Chlorophyll A-B binding family protein CP22, NONPHOTOCHEMICAL QUENCHING
4, PHOTOSYSTEM II SUBUNIT S		 0.92 0.31 -0.31
53 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.92 0.3 -0.33
54 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.92 0.33 -0.31
55 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.92 0.29 -0.31
56 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.92 0.32 -0.32
57 AT5G55220 trigger factor type chaperone family protein 0.92 0.3 -0.31
58 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.92 0.32 -0.32
59 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.92 0.31 -0.29
60 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein 0.92 0.31 -0.31
61 AT5G54600 Translation protein SH3-like family protein 0.92 0.31 -0.3
62 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.92 0.32 -0.33
63 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.91 0.33 -0.33
64 AT4G34730 ribosome-binding factor A family protein 0.91 0.31 -0.3
65 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.91 0.31 -0.3
66 AT3G28460 methyltransferases 0.91 0.29 -0.32
67 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.91 0.32 -0.32
68 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.91 0.31 -0.34
69 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.91 0.33 -0.3
70 AT4G21280 photosystem II subunit QA PHOTOSYSTEM II SUBUNIT Q,
PHOTOSYSTEM II SUBUNIT Q-1,
photosystem II subunit QA		 0.91 0.3 -0.31
71 AT4G03280 photosynthetic electron transfer C photosynthetic electron transfer
C, PROTON GRADIENT REGULATION 1		 0.91 0.32 -0.31
72 AT5G45680 FK506-binding protein 13 FK506 BINDING PROTEIN 13,
FK506-binding protein 13		 0.91 0.3 -0.3
73 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.91 0.34 -0.32
74 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein LOW QUANTUM YIELD OF PHOTOSYSTEM
II 1		 0.91 0.32 -0.32
75 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.91 0.31 -0.31
76 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.91 0.32 -0.31
77 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.91 0.31 -0.29
78 AT1G32470 Single hybrid motif superfamily protein 0.91 0.34 -0.32
79 AT3G20230 Ribosomal L18p/L5e family protein 0.91 0.32 -0.33
80 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.91 0.32 -0.32
81 AT1G29070 Ribosomal protein L34 0.91 0.3 -0.31
82 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.31 -0.29
83 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.91 0.32 -0.31
84 AT1G14030 Rubisco methyltransferase family protein 0.91 0.33 -0.31
85 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.91 0.32 -0.31
86 AT1G55370 NDH-dependent cyclic electron flow 5 NDH-dependent cyclic electron flow
5		 0.9 0.31 -0.31
87 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.9 0.35 -0.33
88 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.9 0.32 -0.32
89 AT4G17740 Peptidase S41 family protein 0.9 0.32 -0.31
90 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.9 0.3 -0.31
91 AT1G36390 Co-chaperone GrpE family protein 0.9 0.33 -0.33
92 AT3G01480 cyclophilin 38 ARABIDOPSIS CYCLOPHILIN 38,
cyclophilin 38		 0.9 0.31 -0.32
93 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.9 0.34 -0.29
94 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.9 0.3 -0.34
95 AT3G23700 Nucleic acid-binding proteins superfamily 0.9 0.32 -0.31
96 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.9 0.32 -0.31
97 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.9 0.31 -0.32
98 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.9 0.32 -0.33
99 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.9 0.31 -0.31
100 AT4G26370 antitermination NusB domain-containing protein 0.9 0.33 -0.31
101 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.9 0.3 -0.32
102 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.31 -0.32
103 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.9 0.33 -0.31
104 AT1G60230 Radical SAM superfamily protein 0.9 0.32 -0.31
105 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.9 0.29 -0.31
106 AT4G37510 Ribonuclease III family protein 0.9 0.31 -0.32
107 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.32 -0.31
108 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.9 0.32 -0.31
109 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.9 0.32 -0.3
110 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.9 0.32 -0.3
111 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.9 0.34 -0.33
112 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.9 0.3 -0.32
113 AT2G24090 Ribosomal protein L35 0.9 0.31 -0.31
114 AT4G15510 Photosystem II reaction center PsbP family protein 0.9 0.31 -0.3
115 AT1G11860 Glycine cleavage T-protein family 0.9 0.3 -0.3
116 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.9 0.32 -0.33
117 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.9 0.33 -0.3
118 AT5G46420 16S rRNA processing protein RimM family 0.9 0.3 -0.29
119 AT3G25290 Auxin-responsive family protein -0.81 0.33 -0.3
120 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.79 0.31 -0.31
121 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.76 0.31 -0.32
122 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.76 0.34 -0.3
123 AT5G18780 F-box/RNI-like superfamily protein -0.76 0.31 -0.3
124 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.75 0.34 -0.3
125 AT3G57380 Glycosyltransferase family 61 protein -0.75 0.31 -0.34
126 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.3 -0.35
127 AT5G24090 chitinase A chitinase A, chitinase A -0.74 0.32 -0.32
128 AT5G49880 mitotic checkpoint family protein -0.71 0.29 -0.33
129 AT2G46150 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.7 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.75 0.43 -0.45 C0051