AT3G23610 : dual specificity protein phosphatase 1
Query Information
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AGICode AT3G23610
Description dual specificity protein phosphatase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 1 0.32 -0.31
2 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 -0.78 0.31 -0.28
3 AT1G75410 BEL1-like homeodomain 3 BEL1-like homeodomain 3 0.78 0.33 -0.31
4 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.77 0.31 -0.3
5 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 -0.77 0.3 -0.29
6 AT5G35530 Ribosomal protein S3 family protein -0.76 0.32 -0.3
7 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.76 0.33 -0.31
8 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 -0.76 0.32 -0.31
9 AT1G50920 Nucleolar GTP-binding protein -0.76 0.32 -0.34
10 AT4G38710 glycine-rich protein -0.75 0.3 -0.32
11 AT1G63940 monodehydroascorbate reductase 6 monodehydroascorbate reductase 6 -0.74 0.34 -0.32
12 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein -0.74 0.29 -0.32
13 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.31 -0.3
14 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 -0.73 0.32 -0.31
15 AT5G65650 Protein of unknown function (DUF1195) -0.73 0.32 -0.31
16 AT5G22440 Ribosomal protein L1p/L10e family -0.73 0.31 -0.32
17 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 -0.73 0.32 -0.33
18 AT4G26720 protein phosphatase X 1 PROTEIN PHOSPHATASE X-1, protein
phosphatase X 1		 -0.73 0.31 -0.33
19 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 0.73 0.33 -0.3
20 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.73 0.33 -0.3
21 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.72 0.33 -0.29
22 AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.31 -0.32
23 AT1G80750 Ribosomal protein L30/L7 family protein -0.72 0.33 -0.29
24 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 -0.72 0.32 -0.31
25 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.72 0.31 -0.32
26 AT2G21580 Ribosomal protein S25 family protein -0.72 0.32 -0.32
27 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 -0.72 0.3 -0.32
28 AT5G49560 Putative methyltransferase family protein -0.72 0.34 -0.32
29 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 -0.72 0.32 -0.32
30 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 0.72 0.31 -0.32
31 AT1G15810 S15/NS1, RNA-binding protein -0.71 0.32 -0.31
32 AT2G25210 Ribosomal protein L39 family protein -0.71 0.32 -0.32
33 AT1G78200 Protein phosphatase 2C family protein 0.71 0.34 -0.31
34 AT4G02230 Ribosomal protein L19e family protein -0.71 0.35 -0.32
35 AT1G02120 GRAM domain family protein VASCULAR ASSOCIATED DEATH1 0.71 0.31 -0.31
36 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 -0.71 0.28 -0.31
37 AT3G61100 Putative endonuclease or glycosyl hydrolase -0.71 0.31 -0.31
38 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.31 -0.31
39 AT4G24270 EMBRYO DEFECTIVE 140 EMBRYO DEFECTIVE 140 -0.71 0.3 -0.32
40 AT2G27330 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.3 -0.3
41 AT1G22985 Integrase-type DNA-binding superfamily protein cytokinin response factor 7 0.71 0.29 -0.32
42 AT3G04920 Ribosomal protein S24e family protein -0.7 0.28 -0.32
43 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 -0.7 0.32 -0.31
44 AT2G42710 Ribosomal protein L1p/L10e family -0.7 0.31 -0.32
45 AT3G47370 Ribosomal protein S10p/S20e family protein -0.7 0.32 -0.33
46 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.7 0.32 -0.33
47 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 -0.7 0.32 -0.34
48 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 -0.7 0.3 -0.3
49 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein -0.7 0.31 -0.31
50 AT2G34480 Ribosomal protein L18ae/LX family protein -0.7 0.33 -0.32
51 AT3G13230 RNA-binding KH domain-containing protein -0.7 0.33 -0.33
52 AT1G71430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 28 species: Archae - 0;
Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.69 0.33 -0.32
53 AT2G44120 Ribosomal protein L30/L7 family protein -0.69 0.33 -0.31
54 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 -0.69 0.33 -0.31
55 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.31 -0.3
56 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.69 0.33 -0.32
57 AT3G13040 myb-like HTH transcriptional regulator family protein 0.69 0.32 -0.31
58 AT1G70590 F-box family protein 0.69 0.32 -0.3
59 AT5G41520 RNA binding Plectin/S10 domain-containing protein -0.69 0.32 -0.31
60 AT5G27700 Ribosomal protein S21e -0.69 0.33 -0.31
61 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 -0.69 0.3 -0.31
62 AT1G26460 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.33 -0.31
63 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.3 -0.32
64 AT1G56710 Pectin lyase-like superfamily protein 0.68 0.33 -0.31
65 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 0.68 0.32 -0.32
66 AT4G15770 RNA binding -0.68 0.3 -0.33
67 AT5G60670 Ribosomal protein L11 family protein -0.68 0.32 -0.32
68 AT5G61770 PETER PAN-like protein PETER PAN-like protein -0.68 0.33 -0.31
69 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.68 0.35 -0.3
70 AT1G79470 Aldolase-type TIM barrel family protein -0.68 0.32 -0.32
71 AT1G15250 Zinc-binding ribosomal protein family protein -0.68 0.34 -0.31
72 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.68 0.32 -0.3
73 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.68 0.32 -0.3
74 AT5G61990 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.29 -0.3
75 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.3 -0.3
76 AT3G12350 F-box family protein 0.68 0.32 -0.33
77 AT3G62940 Cysteine proteinases superfamily protein -0.68 0.3 -0.32
78 AT2G06170 transposable element gene -0.68 0.31 -0.33
79 AT5G62440 Protein of unknown function (DUF3223) -0.68 0.31 -0.31
80 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.68 0.31 -0.33
81 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 -0.67 0.3 -0.3
82 AT1G01140 CBL-interacting protein kinase 9 CBL-interacting protein kinase 9,
PROTEIN KINASE 6, SNF1-RELATED
PROTEIN KINASE 3.12		 0.67 0.32 -0.32
83 AT4G29070 Phospholipase A2 family protein 0.67 0.33 -0.32
84 AT3G05560 Ribosomal L22e protein family -0.67 0.32 -0.35
85 AT2G23840 HNH endonuclease 0.67 0.34 -0.33
86 AT1G71400 receptor like protein 12 receptor like protein 12, receptor
like protein 12		 -0.67 0.32 -0.31
87 AT5G66410 phosducin-like protein 3 homolog phosducin-like protein 3 homolog -0.67 0.34 -0.31
88 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 -0.67 0.33 -0.32
89 AT1G06380 Ribosomal protein L1p/L10e family -0.67 0.3 -0.31
90 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase -0.67 0.31 -0.3
91 AT5G56670 Ribosomal protein S30 family protein -0.67 0.31 -0.34
92 AT2G17360 Ribosomal protein S4 (RPS4A) family protein -0.67 0.33 -0.3
93 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A -0.67 0.33 -0.28
94 AT1G71480 Nuclear transport factor 2 (NTF2) family protein 0.67 0.35 -0.3
95 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 -0.67 0.34 -0.32
96 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.67 0.32 -0.31
97 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.31 -0.31
98 AT2G32220 Ribosomal L27e protein family -0.67 0.32 -0.31
99 AT5G58670 phospholipase C1 ARABIDOPSIS THALIANA PHOSPHOLIPASE
C, phospholipase C1, phospholipase
C 1, phospholipase C1		 0.67 0.33 -0.33
100 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 0.66 0.33 -0.3
101 AT3G49430 SER/ARG-rich protein 34A Serine/Arginine-Rich Protein
Splicing Factor 34a,
Serine/Arginine-Rich Protein
Splicing Factor 34a, SER/ARG-rich
protein 34A		 -0.66 0.34 -0.31
102 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 0.66 0.33 -0.34
103 AT5G57290 60S acidic ribosomal protein family -0.66 0.31 -0.36
104 AT2G36160 Ribosomal protein S11 family protein -0.66 0.34 -0.3
105 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 -0.66 0.3 -0.31
106 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 -0.66 0.33 -0.31
107 AT3G58660 Ribosomal protein L1p/L10e family -0.66 0.31 -0.31
108 AT1G19440 3-ketoacyl-CoA synthase 4 3-ketoacyl-CoA synthase 4 -0.66 0.32 -0.31
109 AT5G24660 response to low sulfur 2 RESPONSE TO LOW SULFUR 2 0.66 0.31 -0.3
110 AT1G25260 Ribosomal protein L10 family protein -0.66 0.31 -0.31
111 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 -0.66 0.29 -0.33
112 AT3G24760 Galactose oxidase/kelch repeat superfamily protein 0.66 0.33 -0.31
113 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 -0.66 0.32 -0.31
114 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.66 0.33 -0.31
115 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 0.66 0.3 -0.31
116 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 0.66 0.3 -0.31
117 AT3G12180 Cornichon family protein -0.66 0.32 -0.33
118 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 0.65 0.33 -0.34
119 AT4G17370 Oxidoreductase family protein 0.65 0.31 -0.32
120 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.65 0.31 -0.31
121 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 0.65 0.32 -0.32
122 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 0.65 0.32 -0.28
123 AT5G62850 Nodulin MtN3 family protein AtSWEET5, VEGETATIVE CELL
EXPRESSED1, SWEET5		 0.65 0.3 -0.34
124 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 0.64 0.32 -0.32
125 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.3
126 AT1G76020 Thioredoxin superfamily protein 0.64 0.33 -0.32
127 AT1G17790 DNA-binding bromodomain-containing protein 0.64 0.32 -0.3
128 AT1G51340 MATE efflux family protein 0.64 0.32 -0.31
129 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 0.64 0.31 -0.32
130 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.64 0.3 -0.32
131 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 0.63 0.31 -0.29
132 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 0.63 0.31 -0.34
133 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.63 0.3 -0.32
134 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 0.63 0.32 -0.32
135 AT2G38000 chaperone protein dnaJ-related 0.62 0.3 -0.32
136 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 0.62 0.31 -0.33
137 AT2G16070 plastid division2 PLASTID DIVISION2 0.62 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
138 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.81 0.44 -0.47 C0003
139 C0121 Isoheptylglucosinolate - - - -0.74 0.46 -0.46
140 C0176 MST_2406.9 - - - 0.72 0.46 -0.46
141 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		0.7 0.43 -0.45 C0107
142 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine -0.7 0.43 -0.47 C0031
143 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.69 0.47 -0.46 C0010
144 C0180 MST_2539.9 - - - 0.69 0.43 -0.48