AT3G24590 : plastidic type i signal peptidase 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G24590
Description plastidic type i signal peptidase 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G24590 plastidic type i signal peptidase 1 plastidic type i signal peptidase
1		 1 0.33 -0.33
2 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.9 0.32 -0.32
3 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.9 0.32 -0.3
4 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.89 0.32 -0.29
5 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.88 0.29 -0.34
6 AT2G33450 Ribosomal L28 family 0.88 0.31 -0.32
7 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.88 0.32 -0.31
8 AT4G01690 Flavin containing amine oxidoreductase family HEMG1, PPO1, PPOX 0.87 0.32 -0.31
9 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3082
(InterPro:IPR021434); Has 77 Blast hits to 77 proteins in
38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi -
0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.87 0.32 -0.31
10 AT5G50250 chloroplast RNA-binding protein 31B chloroplast RNA-binding protein
31B		 0.86 0.33 -0.33
11 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.85 0.3 -0.33
12 AT4G20960 Cytidine/deoxycytidylate deaminase family protein 0.85 0.31 -0.31
13 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.85 0.32 -0.3
14 AT3G46630 Protein of unknown function (DUF3223) 0.85 0.29 -0.31
15 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.85 0.32 -0.33
16 AT4G01310 Ribosomal L5P family protein 0.84 0.33 -0.32
17 AT2G26900 Sodium Bile acid symporter family bile acid:sodium symporter family
protein 2		 0.84 0.35 -0.31
18 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.84 0.35 -0.32
19 AT5G63310 nucleoside diphosphate kinase 2 ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE
KINASE 2, NUCLEOSIDE DIPHOSPHATE
KINASE IA, NDPK IA IA, NDP KINASE
1A, nucleoside diphosphate kinase
2		 0.84 0.32 -0.3
20 AT4G28210 embryo defective 1923 embryo defective 1923 0.84 0.33 -0.28
21 AT1G45474 photosystem I light harvesting complex gene 5 photosystem I light harvesting
complex gene 5		 0.84 0.32 -0.32
22 AT5G48590 Protein of unknown function (DUF760) 0.84 0.3 -0.34
23 AT1G20830 multiple chloroplast division site 1 MULTIPLE CHLOROPLAST DIVISION SITE
1		 0.83 0.32 -0.34
24 AT2G35450 catalytics;hydrolases 0.83 0.31 -0.32
25 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 -0.83 0.31 -0.32
26 AT4G13220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 27 Blast hits to 27 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.31 -0.33
27 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase 0.83 0.31 -0.31
28 AT5G14260 Rubisco methyltransferase family protein 0.82 0.34 -0.3
29 AT4G33680 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 ABERRANT GROWTH AND DEATH 2 0.82 0.32 -0.32
30 AT5G39830 Trypsin family protein with PDZ domain DEG8, DEG PROTEASE 8 0.82 0.32 -0.31
31 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.82 0.29 -0.32
32 AT2G26550 heme oxygenase 2 heme oxygenase 2 0.82 0.32 -0.33
33 AT5G19170 Protein of Unknown Function (DUF239) 0.82 0.3 -0.32
34 AT4G28030 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.81 0.32 -0.32
35 AT3G06950 Pseudouridine synthase family protein 0.81 0.31 -0.32
36 AT3G52960 Thioredoxin superfamily protein 0.81 0.33 -0.29
37 AT4G05090 Inositol monophosphatase family protein 0.81 0.33 -0.29
38 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2499 (InterPro:IPR019634);
Has 319 Blast hits to 317 proteins in 103 species: Archae -
0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).		 0.8 0.3 -0.29
39 AT2G03050 Mitochondrial transcription termination factor family
protein		 EMBRYO DEFECTIVE 93, SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 10		 0.8 0.31 -0.34
40 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARABIDOPSIS SERIN PROTEASE 0.8 0.31 -0.31
41 AT4G38225 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.8 0.32 -0.3
42 AT1G24020 MLP-like protein 423 MLP-like protein 423 0.8 0.33 -0.31
43 AT1G69526 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.8 0.32 -0.32
44 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.77 0.33 -0.31
45 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.76 0.3 -0.32
46 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.32 -0.32
47 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.31 -0.31
48 AT5G49880 mitotic checkpoint family protein -0.74 0.32 -0.32
49 AT5G48940 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.73 0.3 -0.3
50 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.73 0.32 -0.28
51 AT5G63930 Leucine-rich repeat protein kinase family protein -0.73 0.31 -0.33
52 AT1G30760 FAD-binding Berberine family protein -0.73 0.3 -0.33
53 AT4G23690 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.73 0.32 -0.32
54 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.73 0.29 -0.32
55 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.71 0.3 -0.32
56 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.71 0.31 -0.34
57 AT4G34600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane
system; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: M germinated pollen stage, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.71 0.32 -0.31
58 AT1G22440 Zinc-binding alcohol dehydrogenase family protein -0.71 0.3 -0.29
59 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.32 -0.33
60 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16		 -0.71 0.31 -0.31
61 AT1G09460 Carbohydrate-binding X8 domain superfamily protein -0.7 0.31 -0.32
62 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.7 0.29 -0.33
63 AT2G34500 cytochrome P450, family 710, subfamily A, polypeptide 1 cytochrome P450, family 710,
subfamily A, polypeptide 1		 -0.7 0.31 -0.29
64 AT1G09380 nodulin MtN21 /EamA-like transporter family protein -0.69 0.32 -0.32
65 AT5G47750 D6 protein kinase like 2 D6 protein kinase like 2, PK5 -0.69 0.32 -0.32
66 AT3G62270 HCO3- transporter family -0.69 0.32 -0.32
67 AT1G05577 Domain of unknown function (DUF966) -0.69 0.31 -0.31
68 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.32 -0.34
69 AT1G31950 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.68 0.32 -0.33
70 AT1G15210 pleiotropic drug resistance 7 ATP-binding cassette G35,
PLEIOTROPIC DRUG RESISTANCE 7,
pleiotropic drug resistance 7		 -0.68 0.29 -0.31
71 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.68 0.3 -0.3
72 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.67 0.3 -0.31
73 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 -0.67 0.3 -0.34
74 AT5G59530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.31 -0.31
75 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 -0.67 0.33 -0.31
76 AT3G24240 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.66 0.32 -0.32
77 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.66 0.3 -0.33
78 AT5G05640 nucleoprotein-related -0.66 0.34 -0.32
79 AT3G52830 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: Ankyrin
repeat family protein (TAIR:AT5G54700.1); Has 6 Blast hits
to 6 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.66 0.31 -0.32
80 AT4G10380 NOD26-like intrinsic protein 5;1 AtNIP5;1, NOD26-like intrinsic
protein 5;1, NOD26-LIKE MIP 6,
NOD26-LIKE MIP 8		 -0.65 0.34 -0.3
81 AT2G38370 Plant protein of unknown function (DUF827) -0.65 0.32 -0.3
82 AT1G67030 zinc finger protein 6 zinc finger protein 6 -0.65 0.31 -0.32
83 AT3G15300 VQ motif-containing protein -0.65 0.31 -0.34
84 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.65 0.32 -0.34
85 AT1G53180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.65 0.31 -0.33
86 AT1G44970 Peroxidase superfamily protein -0.64 0.32 -0.33
87 AT4G13235 embryo sac development arrest 21 embryo sac development arrest 21 -0.64 0.3 -0.33
88 AT5G01160 RING/U-box superfamily protein -0.64 0.32 -0.32
89 AT1G66950 pleiotropic drug resistance 11 ATP-binding cassette G39,
PLEIOTROPIC DRUG RESISTANCE 11,
pleiotropic drug resistance 11		 -0.64 0.31 -0.32
90 AT2G35330 RING/U-box superfamily protein -0.64 0.3 -0.31
91 AT1G30750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: hypocotyl, root, pollen
tube; Has 1177 Blast hits to 607 proteins in 189 species:
Archae - 0; Bacteria - 312; Metazoa - 195; Fungi - 185;
Plants - 27; Viruses - 16; Other Eukaryotes - 442 (source:
NCBI BLink).		 -0.64 0.33 -0.3
92 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.64 0.32 -0.33
93 AT3G04570 AT-hook motif nuclear-localized protein 19 AT-hook motif nuclear-localized
protein 19		 -0.63 0.33 -0.3
94 AT3G50230 Leucine-rich repeat protein kinase family protein -0.63 0.32 -0.31
95 AT5G09400 K+ uptake permease 7 K+ uptake permease 7 -0.63 0.32 -0.33
96 AT1G18980 RmlC-like cupins superfamily protein -0.63 0.34 -0.33
97 AT2G39300 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G55060.1); Has 46416 Blast
hits to 28308 proteins in 1743 species: Archae - 734;
Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants -
2267; Viruses - 163; Other Eukaryotes - 10445 (source: NCBI
BLink).		 -0.63 0.3 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.75 0.42 -0.43 C0051