AT3G18120 : -
Query Information
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AGICode AT3G18120
Description F-box associated ubiquitination effector family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G18120 F-box associated ubiquitination effector family protein 1 0.31 -0.33
2 AT2G24320 alpha/beta-Hydrolases superfamily protein 0.76 0.35 -0.31
3 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 0.74 0.33 -0.31
4 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.74 0.3 -0.31
5 AT5G27190 transposable element gene 0.74 0.31 -0.33
6 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 0.73 0.31 -0.35
7 AT5G17640 Protein of unknown function (DUF1005) -0.72 0.33 -0.33
8 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.3 -0.35
9 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.71 0.31 -0.31
10 AT2G18720 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.71 0.31 -0.31
11 AT1G04670 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.31
12 AT5G65710 HAESA-like 2 HAESA-like 2 0.7 0.33 -0.31
13 AT1G20480 AMP-dependent synthetase and ligase family protein -0.7 0.32 -0.32
14 AT5G46310 WRKY family transcription factor 0.7 0.31 -0.31
15 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.7 0.33 -0.31
16 AT3G17100 sequence-specific DNA binding transcription factors -0.69 0.31 -0.32
17 AT1G26300 BSD domain-containing protein -0.69 0.32 -0.32
18 AT3G53940 Mitochondrial substrate carrier family protein 0.69 0.33 -0.32
19 AT1G36230 unknown protein; Has 5786 Blast hits to 627 proteins in 69
species: Archae - 0; Bacteria - 5701; Metazoa - 46; Fungi -
22; Plants - 13; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.69 0.3 -0.33
20 AT3G19950 RING/U-box superfamily protein -0.68 0.32 -0.3
21 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 -0.68 0.29 -0.32
22 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.68 0.31 -0.31
23 AT1G11270 F-box and associated interaction domains-containing protein -0.68 0.32 -0.31
24 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.68 0.32 -0.31
25 AT2G19200 unknown protein 0.68 0.31 -0.3
26 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.68 0.31 -0.29
27 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 0.68 0.33 -0.32
28 AT1G64820 MATE efflux family protein -0.68 0.31 -0.29
29 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.67 0.33 -0.31
30 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 0.67 0.32 -0.31
31 AT4G37880 LisH/CRA/RING-U-box domains-containing protein -0.67 0.32 -0.33
32 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 0.67 0.31 -0.33
33 AT2G03160 SKP1-like 19 SKP1-like 19, SKP1-like 19 -0.67 0.31 -0.32
34 AT3G13430 RING/U-box superfamily protein -0.67 0.32 -0.32
35 AT5G35420 transposable element gene 0.66 0.32 -0.31
36 AT2G43790 MAP kinase 6 MAP kinase 6, MAP kinase 6, MAP
kinase 6, MAP kinase 6		 -0.66 0.31 -0.3
37 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein -0.66 0.3 -0.31
38 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 0.66 0.33 -0.31
39 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 0.66 0.31 -0.31
40 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 0.66 0.3 -0.33
41 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 0.66 0.32 -0.35
42 AT2G37975 Yos1-like protein -0.66 0.32 -0.31
43 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.65 0.31 -0.31
44 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B -0.65 0.3 -0.31
45 AT5G39560 Galactose oxidase/kelch repeat superfamily protein 0.65 0.32 -0.32
46 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75		 -0.64 0.3 -0.32
47 AT5G39310 expansin A24 ATEXP24, expansin A24, ATHEXP
ALPHA 1.19, EXPANSIN 24, expansin
A24		 -0.64 0.33 -0.32
48 AT3G02140 AFP2 (ABI five-binding protein 2) family protein ABI FIVE BINDING PROTEIN 4, TWO OR
MORE ABRES-CONTAINING GENE 2		 -0.64 0.32 -0.32
49 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 0.64 0.34 -0.3
50 AT4G38930 Ubiquitin fusion degradation UFD1 family protein -0.64 0.33 -0.31
51 AT2G07560 H(+)-ATPase 6 H(+)-ATPase 6, H(+)-ATPase 6 -0.64 0.31 -0.3
52 AT3G60400 Mitochondrial transcription termination factor family
protein		 0.64 0.3 -0.3
53 AT4G39910 ubiquitin-specific protease 3 ubiquitin-specific protease 3,
ubiquitin-specific protease 3		 -0.64 0.29 -0.31
54 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.63 0.3 -0.29
55 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.63 0.3 -0.3
56 AT4G29570 Cytidine/deoxycytidylate deaminase family protein -0.63 0.31 -0.31
57 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 0.63 0.32 -0.32
58 AT2G01710 Chaperone DnaJ-domain superfamily protein -0.63 0.3 -0.32
59 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.63 0.33 -0.32
60 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.63 0.33 -0.32
61 AT5G03250 Phototropic-responsive NPH3 family protein 0.62 0.3 -0.32
62 AT3G13780 SMAD/FHA domain-containing protein -0.62 0.3 -0.31
63 AT2G01740 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.32 -0.29
64 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 -0.62 0.3 -0.3
65 AT2G35590 pseudogene, serpin (serine protease inhibitor), putative,
similar to protein zx (Hordeum vulgare subsp. vulgare)
GI:19071, serpin (Triticum aestivum) GI:1885346; contains
Pfam profile PF00079: Serpin (serine protease inhibitor);
this is very likely a pseudogene.; blastp match of 52%
identity and 2.2e-73 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 -0.62 0.31 -0.31
66 AT1G70650 Ran BP2/NZF zinc finger-like superfamily protein 0.62 0.3 -0.31
67 AT2G06230 transposable element gene 0.62 0.35 -0.3
68 AT4G20310 Peptidase M50 family protein 0.62 0.3 -0.29
69 AT4G37240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.62 0.32 -0.29
70 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1		 -0.62 0.3 -0.33
71 AT3G49270 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING:
4 anthesis, C globular stage, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: proline-rich family protein (TAIR:AT3G49300.1); Has 63
Blast hits to 43 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 31; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.62 0.28 -0.31
72 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 -0.62 0.32 -0.32
73 AT1G03610 Protein of unknown function (DUF789) -0.62 0.31 -0.29
74 AT2G38710 AMMECR1 family -0.62 0.31 -0.31
75 AT4G04420 transposable element gene 0.62 0.31 -0.32
76 AT1G77820 transposable element gene 0.61 0.33 -0.31
77 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 -0.61 0.32 -0.33
78 AT5G18650 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.61 0.31 -0.31
79 AT2G32360 Ubiquitin-like superfamily protein 0.61 0.3 -0.32
80 AT1G32610 hydroxyproline-rich glycoprotein family protein 0.61 0.32 -0.31
81 AT1G06060 LisH and RanBPM domains containing protein -0.61 0.31 -0.32
82 AT3G06230 MAP kinase kinase 8 MAP kinase kinase 8, MAP kinase
kinase 8		 0.61 0.32 -0.33
83 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.61 0.32 -0.29
84 AT4G38470 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
46		 -0.61 0.31 -0.31
85 AT2G25310 Protein of unknown function (DUF2012) -0.61 0.32 -0.34
86 AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein -0.61 0.34 -0.31
87 AT3G58460 RHOMBOID-like protein 15 RHOMBOID-like protein 15,
RHOMBOID-like protein 15		 -0.61 0.31 -0.32
88 AT2G42670 Protein of unknown function (DUF1637) -0.61 0.31 -0.3
89 AT1G07740 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.34 -0.29
90 AT2G36900 membrin 11 ATMEMB11, membrin 11 -0.61 0.33 -0.3
91 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 0.61 0.32 -0.31
92 AT1G68340 Protein of unknown function (DUF1639) -0.61 0.31 -0.32
93 AT3G50590 Transducin/WD40 repeat-like superfamily protein -0.61 0.31 -0.31
94 AT5G51930 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 0.61 0.32 -0.33
95 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.31 -0.31
96 AT4G00280 BEST Arabidopsis thaliana protein match is: Leucine-rich
repeat transmembrane protein kinase protein
(TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.29
97 AT1G67570 Protein of unknown function (DUF3537) 0.61 0.32 -0.29
98 AT1G61100 disease resistance protein (TIR class), putative -0.61 0.31 -0.34
99 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.6 0.33 -0.32
100 AT3G61170 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.3 -0.33
101 AT5G28820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G27260.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.6 0.31 -0.32
102 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 0.6 0.33 -0.31
103 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 0.6 0.32 -0.3
104 AT1G18940 Nodulin-like / Major Facilitator Superfamily protein -0.6 0.3 -0.35
105 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.6 0.33 -0.32
106 AT1G48640 Transmembrane amino acid transporter family protein -0.6 0.29 -0.33
107 AT3G56670 BEST Arabidopsis thaliana protein match is: F-box and
associated interaction domains-containing protein
(TAIR:AT1G32420.1); Has 58 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.33 -0.31
108 AT1G63960 Copper transport protein family 0.6 0.31 -0.32
109 AT3G18450 PLAC8 family protein -0.6 0.31 -0.31
110 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.6 0.33 -0.29
111 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein 0.6 0.32 -0.32
112 AT5G50020 DHHC-type zinc finger family protein -0.6 0.3 -0.32
113 AT3G16970 Plant self-incompatibility protein S1 family -0.59 0.3 -0.3
114 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION -0.59 0.29 -0.32
115 AT5G02430 Transducin/WD40 repeat-like superfamily protein 0.59 0.32 -0.33
116 AT5G41080 PLC-like phosphodiesterases superfamily protein AtGDPD2, glycerophosphodiester
phosphodiesterase 2		 -0.59 0.31 -0.33
117 AT4G12410 SAUR-like auxin-responsive protein family -0.59 0.31 -0.32
118 AT1G50040 Protein of unknown function (DUF1005) -0.59 0.3 -0.31
119 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.59 0.3 -0.3
120 AT3G48480 Cysteine proteinases superfamily protein 0.59 0.32 -0.32
121 AT4G03790 transposable element gene 0.59 0.31 -0.32
122 AT4G19470 Leucine-rich repeat (LRR) family protein 0.59 0.34 -0.31
123 AT5G07310 Integrase-type DNA-binding superfamily protein 0.59 0.32 -0.33
124 AT3G11380 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.29 -0.32
125 AT4G01440 nodulin MtN21 /EamA-like transporter family protein 0.59 0.31 -0.33
126 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.59 0.31 -0.3
127 AT1G43940 transposable element gene -0.59 0.31 -0.3
128 AT3G19680 Protein of unknown function (DUF1005) -0.59 0.32 -0.31
129 AT5G48780 disease resistance protein (TIR-NBS class) -0.59 0.3 -0.32
130 AT2G35635 ubiquitin 7 RELATED TO UBIQUITIN 2, ubiquitin
7		 -0.59 0.31 -0.31
131 AT4G15430 ERD (early-responsive to dehydration stress) family protein 0.59 0.32 -0.31
132 AT3G02555 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits
to 130 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.31
133 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 0.59 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.66 0.45 -0.45 C0016