AT3G18165 : Modifier of snc1,4
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G18165
Description modifier of snc1,4
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G18165 modifier of snc1,4 Modifier of snc1,4 1 0.33 -0.3
2 AT1G54770 Fcf2 pre-rRNA processing protein 0.85 0.3 -0.32
3 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.85 0.31 -0.3
4 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.85 0.29 -0.33
5 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 0.85 0.32 -0.3
6 AT2G44860 Ribosomal protein L24e family protein 0.85 0.33 -0.32
7 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.84 0.33 -0.3
8 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.84 0.32 -0.3
9 AT1G66070 Translation initiation factor eIF3 subunit 0.83 0.31 -0.29
10 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.83 0.32 -0.35
11 AT1G71430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 28 species: Archae - 0;
Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.83 0.31 -0.3
12 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.83 0.32 -0.32
13 AT2G46230 PIN domain-like family protein 0.83 0.34 -0.33
14 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 0.83 0.32 -0.32
15 AT2G16500 arginine decarboxylase 1 arginine decarboxylase 1, ARGDC,
ARGDC1, SPE1		 0.83 0.31 -0.33
16 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.83 0.3 -0.3
17 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.83 0.31 -0.32
18 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.82 0.32 -0.33
19 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.82 0.33 -0.3
20 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.82 0.31 -0.33
21 AT5G05010 clathrin adaptor complexes medium subunit family protein 0.82 0.31 -0.31
22 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.82 0.33 -0.32
23 AT4G39920 C-CAP/cofactor C-like domain-containing protein PORCINO, TUBULIN-FOLDING COFACTOR
C		 0.82 0.32 -0.31
24 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.81 0.34 -0.32
25 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.81 0.31 -0.32
26 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.81 0.29 -0.29
27 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.81 0.33 -0.31
28 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.81 0.31 -0.29
29 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.8 0.31 -0.3
30 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.8 0.32 -0.32
31 AT5G59180 DNA-directed RNA polymerase II NRPB7 0.8 0.32 -0.31
32 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.8 0.3 -0.3
33 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.8 0.31 -0.33
34 AT1G12270 stress-inducible protein, putative Hop1 0.8 0.32 -0.32
35 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31		 0.8 0.32 -0.31
36 AT3G25940 TFIIB zinc-binding protein 0.79 0.32 -0.33
37 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.79 0.32 -0.3
38 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.79 0.33 -0.34
39 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain		 0.79 0.31 -0.33
40 AT4G13940 S-adenosyl-L-homocysteine hydrolase S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE
1, EMBRYO DEFECTIVE 1395,
HOMOLOGY-DEPENDENT GENE SILENCING
1, MATERNAL EFFECT EMBRYO ARREST
58, S-ADENOSYL-L-HOMOCYSTEIN
HYDROLASE 1		 0.79 0.32 -0.33
41 AT1G13870 calmodulin binding;purine nucleotide binding AtKTI12, DEFORMED ROOTS AND LEAVES
1		 0.79 0.31 -0.32
42 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.32 -0.32
43 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.79 0.31 -0.32
44 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 0.79 0.29 -0.31
45 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.79 0.32 -0.33
46 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.79 0.31 -0.32
47 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.79 0.33 -0.3
48 AT5G06360 Ribosomal protein S8e family protein 0.79 0.33 -0.35
49 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.79 0.32 -0.31
50 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0.79 0.3 -0.32
51 AT2G46170 Reticulon family protein 0.79 0.32 -0.31
52 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.78 0.31 -0.32
53 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 0.78 0.3 -0.31
54 AT3G62940 Cysteine proteinases superfamily protein 0.78 0.31 -0.32
55 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 0.78 0.31 -0.31
56 AT1G14810 semialdehyde dehydrogenase family protein 0.77 0.34 -0.29
57 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 0.77 0.31 -0.32
58 AT5G58030 Transport protein particle (TRAPP) component 0.77 0.32 -0.31
59 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.77 0.32 -0.34
60 AT1G05055 general transcription factor II H2 ATGTF2H2, general transcription
factor II H2		 0.77 0.31 -0.32
61 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.34 -0.32
62 AT2G44510 CDK inhibitor P21 binding protein 0.77 0.32 -0.33
63 AT2G38800 Plant calmodulin-binding protein-related -0.77 0.31 -0.33
64 AT1G72340 NagB/RpiA/CoA transferase-like superfamily protein 0.77 0.33 -0.32
65 AT3G04830 Protein prenylyltransferase superfamily protein 0.76 0.32 -0.32
66 AT3G07230 wound-responsive protein-related 0.76 0.34 -0.31
67 AT2G42710 Ribosomal protein L1p/L10e family 0.76 0.3 -0.31
68 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 0.76 0.31 -0.31
69 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.76 0.31 -0.3
70 AT2G43770 Transducin/WD40 repeat-like superfamily protein 0.76 0.31 -0.33
71 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 0.76 0.31 -0.29
72 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.76 0.31 -0.33
73 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.76 0.34 -0.33
74 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.76 0.31 -0.31
75 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.76 0.32 -0.32
76 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.76 0.32 -0.3
77 AT1G55150 DEA(D/H)-box RNA helicase family protein 0.76 0.32 -0.29
78 AT1G43710 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 embryo defective 1075 0.76 0.3 -0.29
79 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.76 0.31 -0.31
80 AT1G23490 ADP-ribosylation factor 1 ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR,
ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR 1A		 0.76 0.33 -0.31
81 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.75 0.31 -0.34
82 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.32 -0.32
83 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.74 0.33 -0.34
84 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.3 -0.31
85 AT2G25590 Plant Tudor-like protein -0.72 0.33 -0.27
86 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.33 -0.31
87 AT1G09910 Rhamnogalacturonate lyase family protein -0.72 0.3 -0.29
88 AT1G28260 Telomerase activating protein Est1 -0.72 0.32 -0.31
89 AT4G38350 Patched family protein -0.71 0.29 -0.31
90 AT5G37540 Eukaryotic aspartyl protease family protein -0.7 0.32 -0.32
91 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.69 0.3 -0.31
92 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.33 -0.32
93 AT5G63560 HXXXD-type acyl-transferase family protein -0.68 0.31 -0.31
94 AT2G30500 Kinase interacting (KIP1-like) family protein -0.68 0.28 -0.33
95 AT2G25790 Leucine-rich receptor-like protein kinase family protein -0.68 0.29 -0.31
96 AT3G52060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.68 0.32 -0.33
97 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.67 0.34 -0.32
98 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.67 0.3 -0.32
99 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.67 0.3 -0.33
100 AT4G05100 myb domain protein 74 myb domain protein 74, myb domain
protein 74		 -0.67 0.33 -0.32
101 AT3G13672 TRAF-like superfamily protein -0.67 0.34 -0.32
102 AT3G01320 SIN3-like 1 SIN3-like 1 -0.66 0.32 -0.33
103 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.65 0.31 -0.36
104 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.65 0.29 -0.32
105 AT3G57530 calcium-dependent protein kinase 32 ATCPK32, CDPK32, calcium-dependent
protein kinase 32		 -0.64 0.3 -0.32
106 AT1G02390 glycerol-3-phosphate acyltransferase 2 ARABIDOPSIS THALIANA
GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 2,
glycerol-3-phosphate
acyltransferase 2		 -0.64 0.31 -0.32
107 AT5G58160 actin binding -0.63 0.31 -0.31
108 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.32 -0.29
109 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.62 0.33 -0.31
110 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.62 0.3 -0.32
111 AT2G15440 Protein of unknown function (DUF579) -0.61 0.31 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.81 0.43 -0.44 C0123
113 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.78 0.45 -0.47
114 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.63 0.3 -0.33 C0254