AGICode | AT3G29080 |
Description | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G29080 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
1 | 0.33 | -0.33 | |||
2 | AT3G05860 | MADS-box transcription factor family protein | 0.76 | 0.31 | -0.32 | |||
3 | AT4G37840 | hexokinase-like 3 | hexokinase-like 3 | -0.74 | 0.33 | -0.31 | ||
4 | AT2G33490 | hydroxyproline-rich glycoprotein family protein | -0.69 | 0.34 | -0.3 | |||
5 | AT1G37537 | transposable element gene | -0.67 | 0.31 | -0.29 | |||
6 | AT5G29100 | transposable element gene | -0.66 | 0.33 | -0.31 | |||
7 | AT5G36990 | transposable element gene | -0.63 | 0.33 | -0.32 | |||
8 | AT5G46010 | Homeodomain-like superfamily protein | 0.63 | 0.31 | -0.32 | |||
9 | AT4G08970 | transposable element gene | 0.62 | 0.3 | -0.32 | |||
10 | AT3G62880 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
ATOEP16-4 | 0.61 | 0.32 | -0.34 | ||
11 | AT5G37900 | TRAF-like superfamily protein | 0.61 | 0.3 | -0.3 | |||
12 | AT3G42600 | transposable element gene | -0.61 | 0.31 | -0.34 | |||
13 | AT5G61720 | Protein of unknown function (DUF1216) | 0.6 | 0.34 | -0.33 | |||
14 | AT4G28700 | ammonium transporter 1;4 | ammonium transporter 1;4 | 0.6 | 0.32 | -0.32 | ||
15 | AT3G12720 | myb domain protein 67 | myb domain protein 67, ATY53, MYB67, myb domain protein 67 |
-0.59 | 0.32 | -0.31 | ||
16 | AT3G45000 | SNF7 family protein | VPS24, VPS24.2 | -0.59 | 0.31 | -0.31 | ||
17 | AT3G28140 | RNA ligase/cyclic nucleotide phosphodiesterase family protein |
0.58 | 0.28 | -0.32 | |||
18 | AT1G19390 | Wall-associated kinase family protein | -0.58 | 0.33 | -0.32 | |||
19 | AT3G47130 | F-box associated ubiquitination effector family protein | -0.57 | 0.31 | -0.32 | |||
20 | AT1G74320 | Protein kinase superfamily protein | 0.57 | 0.31 | -0.29 | |||
21 | AT1G80330 | gibberellin 3-oxidase 4 | ARABIDOPSIS THALIANA GIBBERELLIN 3-OXIDASE 4, gibberellin 3-oxidase 4 |
-0.57 | 0.31 | -0.33 | ||
22 | AT3G27930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35 Blast hits to 35 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.32 | -0.31 | |||
23 | AT3G29796 | unknown protein; Has 28 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.57 | 0.29 | -0.31 | |||
24 | AT4G20250 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.32 | |||
25 | AT3G51200 | SAUR-like auxin-responsive protein family | -0.57 | 0.3 | -0.3 | |||
26 | AT5G59120 | subtilase 4.13 | subtilase 4.13, subtilase 4.13 | 0.57 | 0.3 | -0.33 | ||
27 | AT3G01620 | beta-1,4-N-acetylglucosaminyltransferase family protein | 0.56 | 0.31 | -0.33 | |||
28 | AT3G42330 | transposable element gene | -0.56 | 0.32 | -0.33 | |||
29 | AT1G23570 | Domain of unknown function (DUF220) | 0.56 | 0.3 | -0.31 | |||
30 | AT1G29110 | Cysteine proteinases superfamily protein | 0.55 | 0.33 | -0.33 | |||
31 | AT1G78810 | unknown protein; Has 75 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.55 | 0.3 | -0.32 | |||
32 | AT2G14800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
-0.55 | 0.32 | -0.3 | |||
33 | AT2G18880 | vernalization5/VIN3-like | vernalization5/VIN3-like 2, VIN3-like 3 |
0.54 | 0.3 | -0.31 | ||
34 | AT1G12220 | Disease resistance protein (CC-NBS-LRR class) family | RESISTANT TO P. SYRINGAE 5 | -0.54 | 0.32 | -0.35 | ||
35 | AT3G16120 | Dynein light chain type 1 family protein | 0.54 | 0.33 | -0.32 | |||
36 | AT5G65850 | F-box and associated interaction domains-containing protein | 0.54 | 0.31 | -0.32 | |||
37 | AT2G19500 | cytokinin oxidase 2 | ATCKX2, cytokinin oxidase 2 | -0.54 | 0.31 | -0.3 | ||
38 | AT4G09960 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 11, SEEDSTICK | 0.54 | 0.32 | -0.31 | ||
39 | AT4G31970 | cytochrome P450, family 82, subfamily C, polypeptide 2 | cytochrome P450, family 82, subfamily C, polypeptide 2 |
-0.54 | 0.3 | -0.29 | ||
40 | AT5G48350 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.54 | 0.33 | -0.32 | |||
41 | AT2G44470 | beta glucosidase 29 | beta glucosidase 29 | -0.53 | 0.31 | -0.31 | ||
42 | AT1G69550 | disease resistance protein (TIR-NBS-LRR class) | 0.52 | 0.29 | -0.32 | |||
43 | AT4G30540 | Class I glutamine amidotransferase-like superfamily protein | 0.52 | 0.33 | -0.3 | |||
44 | AT5G64360 | Chaperone DnaJ-domain superfamily protein | EMF1-Interacting Protein 1 | -0.52 | 0.31 | -0.33 | ||
45 | AT2G12520 | transposable element gene | 0.52 | 0.32 | -0.31 | |||
46 | AT5G38750 | asparaginyl-tRNA synthetase family | 0.52 | 0.29 | -0.31 | |||
47 | AT5G35090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.52 | 0.33 | -0.29 | |||
48 | AT1G04650 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.52 | 0.33 | -0.32 | |||
49 | AT2G25340 | vesicle-associated membrane protein 712 | vesicle-associated membrane protein 712, VAMP712, vesicle-associated membrane protein 712 |
0.52 | 0.32 | -0.3 | ||
50 | AT4G36560 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.33 | -0.31 | |||
51 | AT2G38300 | myb-like HTH transcriptional regulator family protein | -0.52 | 0.32 | -0.3 | |||
52 | AT3G50180 | Plant protein of unknown function (DUF247) | 0.51 | 0.31 | -0.31 | |||
53 | AT4G11770 | Galactose oxidase/kelch repeat superfamily protein | -0.51 | 0.32 | -0.3 | |||
54 | AT5G25880 | NADP-malic enzyme 3 | Arabidopsis thaliana NADP-malic enzyme 3, NADP-malic enzyme 3 |
0.5 | 0.32 | -0.32 | ||
55 | AT1G02250 | NAC domain containing protein 5 | NAC domain containing protein 5, NAC domain containing protein 5 |
-0.5 | 0.32 | -0.31 | ||
56 | AT5G37090 | transposable element gene | -0.5 | 0.32 | -0.3 | |||
57 | AT2G14160 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.5 | 0.29 | -0.31 | |||
58 | AT5G36080 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G32904.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.49 | 0.34 | -0.34 | |||
59 | AT3G62170 | VANGUARD 1 homolog 2 | VANGUARD 1 homolog 2 | -0.49 | 0.31 | -0.33 | ||
60 | AT4G33290 | F-box and associated interaction domains-containing protein | -0.49 | 0.3 | -0.31 | |||
61 | AT5G26640 | BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). |
-0.49 | 0.32 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
62 | C0101 | Glutamic acid | D,L-Glutamic acid | L-Glutamate; D-Glutamate | tyrosine biosynthesis I, serine biosynthesis, tyrosine degradation I, uridine-5'-phosphate biosynthesis, proline biosynthesis III, glutamate biosynthesis V, glycine biosynthesis, lysine biosynthesis VI, leucine biosynthesis, UDP-N-acetyl-D-glucosamine biosynthesis II, tRNA charging, gamma-glutamyl cycle (plant pathway), L-Ndelta-acetylornithine biosynthesis, tryptophan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, 4-hydroxyphenylpyruvate biosynthesis, proline degradation II, photorespiration, 5-aminoimidazole ribonucleotide biosynthesis I, folate polyglutamylation, ammonia assimilation cycle II, arginine degradation VI (arginase 2 pathway), asparagine biosynthesis III (tRNA-dependent), tetrahydrofolate biosynthesis II, glutamine biosynthesis III, valine degradation I, glucosinolate biosynthesis from dihomomethionine, phenylalanine biosynthesis II, citrulline biosynthesis, gamma-glutamyl cycle, indole-3-acetyl-amino acid biosynthesis, purine nucleotides de novo biosynthesis II, IAA biosynthesis I, NAD biosynthesis I (from aspartate), alanine biosynthesis II, purine nucleotide metabolism (phosphotransfer and nucleotide modification), glucosinolate biosynthesis from homomethionine, phenylalanine degradation III, ornithine biosynthesis, glutathione-mediated detoxification II, pyrimidine ribonucleotides interconversion, indole glucosinolate breakdown (active in intact plant cell), aspartate degradation II, glucosinolate biosynthesis from trihomomethionine, glucosinolate biosynthesis from tetrahomomethionine, L-glutamine biosynthesis II (tRNA-dependent), camalexin biosynthesis, glutathione biosynthesis, aspartate biosynthesis, leucine degradation I, glutathione degradation, pyridine nucleotide cycling (plants), glutamate degradation I, valine biosynthesis, glucosinolate biosynthesis from tryptophan, arginine biosynthesis II (acetyl cycle), isoleucine biosynthesis I (from threonine), arginine biosynthesis I, arginine degradation I (arginase pathway), glucosinolate biosynthesis from hexahomomethionine, tetrapyrrole biosynthesis I, alanine degradation III, pyridoxal 5'-phosphate biosynthesis II, glutamate biosynthesis IV, glutamate degradation IV, asparagine biosynthesis I, histidine biosynthesis, lysine degradation II, pantothenate biosynthesis, isoleucine degradation I, folate polyglutamylation II, glutamine biosynthesis I, glucosinolate biosynthesis from phenylalanine, tyrosine biosynthesis II, nitrate reduction II (assimilatory), alanine degradation II (to D-lactate) |
-0.5 | 0.33 | -0.32 |