AT3G13960 : growth-regulating factor 5
Query Information
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AGICode AT3G13960
Description growth-regulating factor 5
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13960 growth-regulating factor 5 growth-regulating factor 5,
growth-regulating factor 5		 1 0.33 -0.31
2 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 0.84 0.3 -0.32
3 AT2G31400 genomes uncoupled 1 genomes uncoupled 1 0.78 0.3 -0.32
4 AT1G04620 coenzyme F420 hydrogenase family / dehydrogenase, beta
subunit family		 7-hydroxymethyl chlorophyll a
(HMChl) reductase		 0.77 0.32 -0.31
5 AT4G23940 FtsH extracellular protease family 0.76 0.34 -0.34
6 AT5G65640 beta HLH protein 93 beta HLH protein 93 -0.74 0.3 -0.34
7 AT3G15520 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.74 0.31 -0.31
8 AT3G01680 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28
(InterPro:IPR021640); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast
hits to 112 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 sieve element occlusion b,
Sieve-Element-Occlusion-Related 1		 0.73 0.3 -0.3
9 AT2G31070 TCP domain protein 10 TCP domain protein 10 0.73 0.3 -0.31
10 AT5G16540 zinc finger nuclease 3 zinc finger nuclease 3 0.73 0.32 -0.33
11 AT5G12150 Rho GTPase activation protein (RhoGAP) with PH domain 0.72 0.3 -0.3
12 AT5G02860 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.3 -0.31
13 AT3G01670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits
to 111 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 sieve element occlusion a 0.72 0.31 -0.34
14 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.31
15 AT1G54350 ABC transporter family protein ATP-binding cassette D2 0.71 0.32 -0.32
16 AT3G17750 Protein kinase superfamily protein 0.71 0.29 -0.31
17 AT1G53230 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
3		 TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 3		 0.71 0.33 -0.34
18 AT4G10180 light-mediated development protein 1 / deetiolated1 (DET1) ATDET1, DE-ETIOLATED 1, FUSCA 2 0.71 0.3 -0.33
19 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.71 0.32 -0.34
20 AT4G18390 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
2		 TCP2, TEOSINTE BRANCHED 1,
cycloidea and PCF transcription
factor 2		 0.71 0.3 -0.31
21 AT5G53660 growth-regulating factor 7 growth-regulating factor 7,
growth-regulating factor 7		 0.7 0.31 -0.32
22 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 0.7 0.32 -0.34
23 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.7 0.31 -0.3
24 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.7 0.33 -0.29
25 AT2G21380 Kinesin motor family protein 0.69 0.29 -0.31
26 AT1G24400 lysine histidine transporter 2 AMINO ACID TRANSPORTER-LIKE
PROTEIN 2, ARABIDOPSIS LYSINE
HISTIDINE TRANSPORTER 2, lysine
histidine transporter 2		 0.69 0.35 -0.32
27 AT4G32551 LisH dimerisation motif;WD40/YVTN repeat-like-containing
domain		 LEUNIG, ROTUNDA 2 0.69 0.31 -0.34
28 AT2G30150 UDP-Glycosyltransferase superfamily protein 0.69 0.32 -0.31
29 ATCG00760 ribosomal protein L36 ribosomal protein L36 0.68 0.32 -0.33
30 ATCG00780 ribosomal protein L14 ribosomal protein L14 0.68 0.32 -0.32
31 AT1G75310 auxin-like 1 protein auxilin-like 1 0.68 0.31 -0.32
32 AT4G18810 NAD(P)-binding Rossmann-fold superfamily protein 0.68 0.32 -0.32
33 AT2G22190 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
E		 0.67 0.31 -0.32
34 AT1G27850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G40070.1); Has 9215
Blast hits to 5316 proteins in 473 species: Archae - 6;
Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539;
Viruses - 143; Other Eukaryotes - 2652 (source: NCBI
BLink).		 0.67 0.31 -0.32
35 AT3G06220 AP2/B3-like transcriptional factor family protein 0.67 0.31 -0.3
36 AT3G16630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATKINESIN-13A, KINESIN-13A 0.67 0.33 -0.33
37 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.67 0.31 -0.3
38 AT2G22840 growth-regulating factor 1 growth-regulating factor 1,
growth-regulating factor 1		 0.66 0.33 -0.31
39 AT1G11790 arogenate dehydratase 1 arogenate dehydratase 1,
Arabidopsis thaliana arogenate
dehydratase 1		 0.66 0.32 -0.32
40 AT3G13225 WW domain-containing protein 0.66 0.33 -0.31
41 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 -0.66 0.3 -0.3
42 AT1G10640 Pectin lyase-like superfamily protein 0.65 0.31 -0.31
43 AT4G33560 Wound-responsive family protein -0.65 0.3 -0.31
44 AT5G07180 ERECTA-like 2 ERECTA-like 2 0.65 0.3 -0.33
45 AT2G43235 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 41 Blast hits to 41 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.65 0.3 -0.35
46 AT4G35780 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
17		 0.65 0.33 -0.29
47 AT4G18130 phytochrome E phytochrome E 0.65 0.33 -0.32
48 AT3G61250 myb domain protein 17 myb domain protein 17, LATE
MERISTEM IDENTITY2, myb domain
protein 17		 0.65 0.3 -0.31
49 AT5G14720 Protein kinase superfamily protein 0.65 0.33 -0.33
50 AT2G34090 maternal effect embryo arrest 18 maternal effect embryo arrest 18 0.64 0.32 -0.31
51 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.64 0.31 -0.3
52 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.64 0.33 -0.31
53 AT1G13950 eukaryotic elongation factor 5A-1 EUKARYOTIC ELONGATION FACTOR 5A-1,
EIF-5A, EUKARYOTIC ELONGATION
FACTOR 5A, eukaryotic elongation
factor 5A-1		 -0.64 0.32 -0.32
54 AT5G41870 Pectin lyase-like superfamily protein 0.63 0.31 -0.34
55 AT1G17430 alpha/beta-Hydrolases superfamily protein -0.63 0.32 -0.32
56 AT4G26630 DEK domain-containing chromatin associated protein 0.63 0.3 -0.3
57 AT2G32860 beta glucosidase 33 beta glucosidase 33 0.63 0.32 -0.33
58 AT2G02080 indeterminate(ID)-domain 4 indeterminate(ID)-domain 4,
indeterminate(ID)-domain 4		 0.63 0.33 -0.29
59 AT4G28410 Tyrosine transaminase family protein -0.63 0.3 -0.3
60 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 0.63 0.3 -0.32
61 AT2G35120 Single hybrid motif superfamily protein -0.63 0.31 -0.32
62 AT5G55660 DEK domain-containing chromatin associated protein 0.63 0.31 -0.32
63 AT3G26310 cytochrome P450, family 71, subfamily B, polypeptide 35 cytochrome P450, family 71,
subfamily B, polypeptide 35		 0.63 0.32 -0.31
64 AT5G42270 FtsH extracellular protease family FTSH5, VARIEGATED 1 0.63 0.33 -0.3
65 AT2G16060 hemoglobin 1 hemoglobin 1, ARATH GLB1, ATGLB1,
CLASS I HEMOGLOBIN, hemoglobin 1,
NSHB1		 -0.62 0.33 -0.33
66 AT2G17850 Rhodanese/Cell cycle control phosphatase superfamily
protein		 -0.62 0.32 -0.36
67 AT2G14900 Gibberellin-regulated family protein -0.62 0.34 -0.32
68 AT3G26770 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.3 -0.3
69 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor -0.61 0.32 -0.32
70 AT1G74030 enolase 1 enolase 1 -0.61 0.31 -0.3
71 AT1G18570 myb domain protein 51 myb domain protein 51, BW51A,
BW51B, HIGH INDOLIC GLUCOSINOLATE
1, myb domain protein 51		 -0.6 0.32 -0.32
72 AT4G33100 CONTAINS InterPro DOMAIN/s: Mitochondrial
distribution/morphology family 35/apoptosis
(InterPro:IPR007918); Has 214 Blast hits to 214 proteins in
102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi
- 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6
(source: NCBI BLink).		 -0.6 0.3 -0.33
73 AT2G43660 Carbohydrate-binding X8 domain superfamily protein -0.6 0.32 -0.31
74 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 -0.59 0.28 -0.31
75 AT5G09800 ARM repeat superfamily protein -0.59 0.34 -0.3
76 AT3G55720 Protein of unknown function (DUF620) -0.59 0.28 -0.33
77 AT5G02100 Oxysterol-binding family protein OSBP(OXYSTEROL BINDING
PROTEIN)-RELATED PROTEIN 3A,
UNFERTILIZED EMBRYO SAC 18		 -0.59 0.34 -0.31
78 AT1G56680 Chitinase family protein -0.59 0.34 -0.31
79 AT4G19420 Pectinacetylesterase family protein -0.59 0.29 -0.33
80 AT3G13650 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.58 0.31 -0.32
81 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.58 0.31 -0.33
82 AT1G76500 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 29, SUPPRESSOR OF PHYB-4#3		 -0.58 0.32 -0.31
83 AT4G39675 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.34 -0.3
84 AT3G29970 B12D protein -0.57 0.31 -0.32
85 AT2G23630 SKU5 similar 16 SKU5 similar 16 -0.57 0.3 -0.31
86 AT4G23510 Disease resistance protein (TIR-NBS-LRR class) family -0.57 0.31 -0.29
87 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.56 0.32 -0.31
88 AT5G48175 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: hypocotyl, male gametophyte, root;
BEST Arabidopsis thaliana protein match is: Glycosyl
hydrolase superfamily protein (TAIR:AT3G09260.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.32 -0.3
89 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.56 0.32 -0.31
90 AT4G32870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.56 0.32 -0.32
91 AT3G43190 sucrose synthase 4 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 4, sucrose synthase 4		 -0.56 0.32 -0.32
92 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.56 0.32 -0.31
93 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.33 -0.29
94 AT3G24450 Heavy metal transport/detoxification superfamily protein -0.55 0.31 -0.33
95 AT4G31730 glutamine dumper 1 glutamine dumper 1 -0.55 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
96 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		0.72 0.49 -0.44
97 C0089 Fortunellin - - - 0.7 0.42 -0.4
98 C0229 Robinin - - flavone biosynthesis 0.69 0.42 -0.44
99 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.66 0.5 -0.49 C0248
100 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.64 0.42 -0.48 C0233