AT3G13920 : eukaryotic translation initiation factor 4A1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G13920
Description eukaryotic translation initiation factor 4A1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 1 0.3 -0.31
2 AT5G56670 Ribosomal protein S30 family protein 0.91 0.31 -0.31
3 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.91 0.33 -0.32
4 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.91 0.32 -0.31
5 AT2G34480 Ribosomal protein L18ae/LX family protein 0.9 0.34 -0.31
6 AT3G04840 Ribosomal protein S3Ae 0.89 0.32 -0.32
7 AT3G25520 ribosomal protein L5 ribosomal protein L5, OLIGOCELLULA
5, PIGGYBACK3, RIBOSOMAL PROTEIN
L5 A		 0.89 0.32 -0.3
8 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 0.89 0.32 -0.31
9 AT5G57020 myristoyl-CoA:protein N-myristoyltransferase ARABIDOPSIS THALIANA
MYRISTOYL-COA:PROTEIN
N-MYRISTOYLTRANSFERASE,
myristoyl-CoA:protein
N-myristoyltransferase		 0.88 0.31 -0.32
10 AT3G05560 Ribosomal L22e protein family 0.88 0.32 -0.3
11 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.88 0.32 -0.32
12 AT2G21580 Ribosomal protein S25 family protein 0.88 0.29 -0.31
13 AT4G15000 Ribosomal L27e protein family 0.88 0.32 -0.3
14 AT1G18540 Ribosomal protein L6 family protein 0.88 0.3 -0.32
15 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.88 0.33 -0.31
16 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.87 0.31 -0.3
17 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.87 0.32 -0.33
18 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 0.87 0.31 -0.32
19 AT3G47370 Ribosomal protein S10p/S20e family protein 0.87 0.28 -0.33
20 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.87 0.27 -0.31
21 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.87 0.31 -0.28
22 AT5G47210 Hyaluronan / mRNA binding family 0.87 0.3 -0.32
23 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.87 0.32 -0.31
24 AT3G58700 Ribosomal L5P family protein 0.87 0.31 -0.33
25 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.86 0.31 -0.3
26 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.86 0.31 -0.32
27 AT2G25210 Ribosomal protein L39 family protein 0.86 0.32 -0.34
28 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.86 0.32 -0.32
29 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 0.86 0.31 -0.31
30 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein 0.86 0.31 -0.31
31 AT5G09510 Ribosomal protein S19 family protein 0.86 0.33 -0.32
32 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 0.86 0.31 -0.34
33 AT4G38710 glycine-rich protein 0.86 0.33 -0.32
34 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.32 -0.3
35 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.86 0.32 -0.3
36 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.86 0.28 -0.32
37 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.86 0.31 -0.31
38 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.86 0.33 -0.3
39 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.85 0.31 -0.32
40 AT1G67430 Ribosomal protein L22p/L17e family protein 0.85 0.32 -0.33
41 AT2G01250 Ribosomal protein L30/L7 family protein 0.85 0.32 -0.29
42 AT5G27770 Ribosomal L22e protein family 0.85 0.31 -0.33
43 AT3G60770 Ribosomal protein S13/S15 0.85 0.33 -0.28
44 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.85 0.3 -0.35
45 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.85 0.3 -0.29
46 AT3G09500 Ribosomal L29 family protein 0.85 0.33 -0.31
47 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0.85 0.31 -0.31
48 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.85 0.32 -0.32
49 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.85 0.29 -0.31
50 AT3G09630 Ribosomal protein L4/L1 family 0.85 0.34 -0.31
51 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.85 0.31 -0.31
52 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.84 0.32 -0.31
53 AT5G58420 Ribosomal protein S4 (RPS4A) family protein 0.84 0.32 -0.33
54 AT4G17520 Hyaluronan / mRNA binding family 0.84 0.34 -0.29
55 AT1G73230 Nascent polypeptide-associated complex NAC 0.84 0.31 -0.34
56 AT2G41840 Ribosomal protein S5 family protein 0.84 0.33 -0.32
57 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.84 0.3 -0.35
58 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.84 0.3 -0.34
59 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.84 0.31 -0.31
60 AT5G35530 Ribosomal protein S3 family protein 0.83 0.31 -0.3
61 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.83 0.31 -0.31
62 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.83 0.32 -0.32
63 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.83 0.34 -0.32
64 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.83 0.3 -0.3
65 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.83 0.32 -0.32
66 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 0.83 0.31 -0.34
67 AT3G60245 Zinc-binding ribosomal protein family protein 0.83 0.3 -0.32
68 AT1G12270 stress-inducible protein, putative Hop1 0.83 0.34 -0.31
69 AT2G40290 Eukaryotic translation initiation factor 2 subunit 1 0.83 0.31 -0.32
70 AT5G41970 Metal-dependent protein hydrolase 0.82 0.33 -0.32
71 AT2G27710 60S acidic ribosomal protein family 0.82 0.31 -0.31
72 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.82 0.3 -0.3
73 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.82 0.32 -0.31
74 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.82 0.31 -0.31
75 AT5G66410 phosducin-like protein 3 homolog phosducin-like protein 3 homolog 0.82 0.32 -0.3
76 AT5G46290 3-ketoacyl-acyl carrier protein synthase I KETOACYL-ACP SYNTHASE 1,
3-ketoacyl-acyl carrier protein
synthase I		 0.82 0.3 -0.32
77 AT1G08360 Ribosomal protein L1p/L10e family 0.82 0.31 -0.34
78 AT4G33865 Ribosomal protein S14p/S29e family protein 0.82 0.3 -0.29
79 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 0.82 0.32 -0.31
80 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.82 0.3 -0.33
81 AT1G50920 Nucleolar GTP-binding protein 0.82 0.31 -0.32
82 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.82 0.29 -0.32
83 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.81 0.32 -0.31
84 AT1G66070 Translation initiation factor eIF3 subunit 0.81 0.32 -0.3
85 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.81 0.34 -0.34
86 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.81 0.31 -0.31
87 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.81 0.29 -0.32
88 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.81 0.31 -0.3
89 AT3G16180 Major facilitator superfamily protein 0.81 0.34 -0.33
90 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.81 0.28 -0.3
91 AT2G44860 Ribosomal protein L24e family protein 0.81 0.32 -0.33
92 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 0.81 0.29 -0.31
93 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.81 0.31 -0.3
94 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.81 0.32 -0.31
95 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.81 0.33 -0.31
96 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.81 0.32 -0.31
97 AT1G43710 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 embryo defective 1075 0.81 0.3 -0.31
98 AT3G02560 Ribosomal protein S7e family protein 0.81 0.3 -0.31
99 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.79 0.3 -0.31
100 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.79 0.3 -0.31
101 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.78 0.3 -0.33
102 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.78 0.3 -0.32
103 AT4G36210 Protein of unknown function (DUF726) -0.78 0.32 -0.3
104 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.78 0.33 -0.32
105 AT1G77450 NAC domain containing protein 32 NAC domain containing protein 32,
NAC domain containing protein 32		 -0.77 0.31 -0.32
106 AT1G74410 RING/U-box superfamily protein -0.77 0.3 -0.32
107 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 -0.77 0.32 -0.32
108 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.77 0.34 -0.32
109 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.76 0.3 -0.3
110 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.76 0.36 -0.33
111 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.76 0.32 -0.32
112 AT5G47070 Protein kinase superfamily protein -0.76 0.32 -0.32
113 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.75 0.31 -0.3
114 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.75 0.31 -0.31
115 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.75 0.31 -0.32
116 AT5G12200 pyrimidine 2 pyrimidine 2 -0.74 0.34 -0.3
117 AT5G24380 YELLOW STRIPE like 2 YELLOW STRIPE LIKE 2, YELLOW
STRIPE like 2		 -0.74 0.3 -0.3
118 AT2G25950 Protein of unknown function (DUF1000) -0.74 0.33 -0.32
119 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.74 0.31 -0.32
120 AT5G03490 UDP-Glycosyltransferase superfamily protein -0.74 0.32 -0.3
121 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.73 0.33 -0.3
122 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 -0.73 0.29 -0.31
123 AT5G38895 RING/U-box superfamily protein -0.73 0.3 -0.32
124 AT3G27110 Peptidase family M48 family protein -0.73 0.31 -0.34
125 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 -0.73 0.3 -0.31
126 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.73 0.3 -0.31
127 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B -0.73 0.34 -0.32
128 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.73 0.32 -0.33
129 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.72 0.31 -0.33
130 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.72 0.32 -0.28
131 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.71 0.33 -0.31
132 AT3G60140 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 30, DARK
INDUCIBLE 2, SENESCENCE-RELATED
GENE 2		 -0.71 0.3 -0.31
133 AT3G16230 Predicted eukaryotic LigT -0.71 0.31 -0.34
134 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.71 0.3 -0.32
135 AT2G42950 Magnesium transporter CorA-like family protein -0.71 0.3 -0.32
136 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.29 -0.3
137 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.71 0.32 -0.31
138 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 -0.71 0.33 -0.31
139 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.7 0.34 -0.3
140 AT2G32800 protein kinase family protein AP4.3A -0.7 0.32 -0.32
141 AT1G70590 F-box family protein -0.7 0.33 -0.31
142 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.34 -0.33
143 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 -0.7 0.32 -0.3
144 AT4G02120 CTP synthase family protein -0.69 0.32 -0.33
145 AT1G70790 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.69 0.32 -0.32
146 AT2G33580 Protein kinase superfamily protein -0.69 0.31 -0.3
147 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.69 0.34 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
148 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.72 0.45 -0.43 C0107
149 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.69 0.3 -0.34 C0054