AGICode | AT3G17970 |
Description | translocon at the outer membrane of chloroplasts 64-III |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G17970 | translocon at the outer membrane of chloroplasts 64-III | translocon at the outer membrane of chloroplasts 64-III, translocon at the outer membrane of chloroplasts 64-III |
1 | 0.3 | -0.31 | ||
2 | AT2G29760 | Tetratricopeptide repeat (TPR)-like superfamily protein | ORGANELLE TRANSCRIPT PROCESSING 81 | 0.84 | 0.31 | -0.31 | ||
3 | AT4G34740 | GLN phosphoribosyl pyrophosphate amidotransferase 2 | GLN phosphoribosyl pyrophosphate amidotransferase 2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CHLOROPLAST IMPORT APPARATUS 1 |
0.83 | 0.33 | -0.33 | ||
4 | AT1G17880 | basic transcription factor 3 | ATBTF3, basic transcription factor 3 |
0.82 | 0.31 | -0.32 | ||
5 | AT3G56150 | eukaryotic translation initiation factor 3C | ATEIF3C-1, ATTIF3C1, eukaryotic translation initiation factor 3C, EIF3C-1, TIF3C1 |
0.82 | 0.3 | -0.31 | ||
6 | AT3G54090 | fructokinase-like 1 | fructokinase-like 1 | 0.82 | 0.29 | -0.34 | ||
7 | AT2G40290 | Eukaryotic translation initiation factor 2 subunit 1 | 0.82 | 0.31 | -0.32 | |||
8 | AT3G13230 | RNA-binding KH domain-containing protein | 0.82 | 0.32 | -0.31 | |||
9 | AT1G09830 | Glycinamide ribonucleotide (GAR) synthetase | 0.81 | 0.33 | -0.3 | |||
10 | AT2G24050 | MIF4G domain-containing protein / MA3 domain-containing protein |
eukaryotic translation Initiation Factor isoform 4G2 |
0.81 | 0.34 | -0.32 | ||
11 | AT5G08610 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
PIGMENT DEFECTIVE 340 | 0.8 | 0.33 | -0.31 | ||
12 | AT1G09620 | ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases |
0.8 | 0.31 | -0.32 | |||
13 | AT3G03310 | lecithin:cholesterol acyltransferase 3 | ARABIDOPSIS LECITHIN:CHOLESTEROL ACYLTRANSFERASE 3, lecithin:cholesterol acyltransferase 3 |
-0.8 | 0.32 | -0.34 | ||
14 | AT5G38895 | RING/U-box superfamily protein | -0.79 | 0.31 | -0.31 | |||
15 | AT2G32800 | protein kinase family protein | AP4.3A | -0.79 | 0.31 | -0.34 | ||
16 | AT5G54080 | homogentisate 1,2-dioxygenase | homogentisate 1,2-dioxygenase | -0.79 | 0.3 | -0.3 | ||
17 | AT4G13530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.79 | 0.32 | -0.34 | |||
18 | AT2G35040 | AICARFT/IMPCHase bienzyme family protein | 0.79 | 0.29 | -0.31 | |||
19 | AT1G62390 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein |
CLUMPED CHLOROPLASTS 1, Phox2 | 0.79 | 0.3 | -0.31 | ||
20 | AT1G15510 | Tetratricopeptide repeat (TPR)-like superfamily protein | ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2, EARLY CHLOROPLAST BIOGENESIS2, VANILLA CREAM 1 |
0.78 | 0.31 | -0.3 | ||
21 | AT1G59990 | DEA(D/H)-box RNA helicase family protein | EMBRYO DEFECTIVE 3108, RNA helicase 22 |
0.78 | 0.32 | -0.33 | ||
22 | AT1G50920 | Nucleolar GTP-binding protein | 0.78 | 0.32 | -0.29 | |||
23 | AT1G08610 | Pentatricopeptide repeat (PPR) superfamily protein | 0.78 | 0.3 | -0.32 | |||
24 | AT1G11320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.78 | 0.34 | -0.31 | |||
25 | AT5G65860 | ankyrin repeat family protein | 0.78 | 0.31 | -0.28 | |||
26 | AT1G19450 | Major facilitator superfamily protein | 0.77 | 0.3 | -0.31 | |||
27 | AT3G51000 | alpha/beta-Hydrolases superfamily protein | -0.77 | 0.34 | -0.32 | |||
28 | AT1G79090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.77 | 0.33 | -0.33 | |||
29 | AT3G08860 | PYRIMIDINE 4 | PYRIMIDINE 4 | -0.77 | 0.34 | -0.33 | ||
30 | AT1G60080 | 3'-5'-exoribonuclease family protein | 0.77 | 0.31 | -0.32 | |||
31 | AT3G20440 | Alpha amylase family protein | BRANCHING ENZYME 1, EMBRYO DEFECTIVE 2729 |
0.77 | 0.31 | -0.33 | ||
32 | AT4G26270 | phosphofructokinase 3 | phosphofructokinase 3 | -0.77 | 0.3 | -0.31 | ||
33 | AT5G27440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.77 | 0.32 | -0.31 | |||
34 | AT1G05055 | general transcription factor II H2 | ATGTF2H2, general transcription factor II H2 |
0.77 | 0.31 | -0.32 | ||
35 | AT4G39530 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.77 | 0.31 | -0.33 | |||
36 | AT1G72550 | tRNA synthetase beta subunit family protein | 0.77 | 0.31 | -0.32 | |||
37 | AT1G71460 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.77 | 0.31 | -0.33 | |||
38 | AT3G44100 | MD-2-related lipid recognition domain-containing protein | -0.76 | 0.32 | -0.29 | |||
39 | AT5G53620 | unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 28929 Blast hits to 19542 proteins in 1425 species: Archae - 211; Bacteria - 3079; Metazoa - 14558; Fungi - 2157; Plants - 966; Viruses - 80; Other Eukaryotes - 7878 (source: NCBI BLink). |
0.76 | 0.33 | -0.32 | |||
40 | AT2G33290 | SU(VAR)3-9 homolog 2 | ATSUVH2, SET DOMAIN-CONTAINING PROTEIN 3, SU(VAR)3-9 homolog 2 |
0.76 | 0.3 | -0.33 | ||
41 | AT1G48570 | zinc finger (Ran-binding) family protein | 0.76 | 0.31 | -0.3 | |||
42 | AT4G31210 | DNA topoisomerase, type IA, core | 0.76 | 0.31 | -0.32 | |||
43 | AT1G66520 | formyltransferase, putative | pigment defective 194 | 0.76 | 0.31 | -0.31 | ||
44 | AT2G24120 | DNA/RNA polymerases superfamily protein | PIGMENT DEFECTIVE 319, SCABRA 3 | 0.76 | 0.32 | -0.33 | ||
45 | AT1G13640 | Phosphatidylinositol 3- and 4-kinase family protein | 0.76 | 0.32 | -0.3 | |||
46 | AT1G76400 | Ribophorin I | 0.76 | 0.31 | -0.31 | |||
47 | AT1G69950 | transposable element gene | 0.76 | 0.3 | -0.33 | |||
48 | AT3G17970 | translocon at the outer membrane of chloroplasts 64-III | translocon at the outer membrane of chloroplasts 64-III, translocon at the outer membrane of chloroplasts 64-III |
0.76 | 0.32 | -0.32 | ||
49 | AT2G17820 | histidine kinase 1 | AHK1, histidine kinase 1, histidine kinase 1 |
0.76 | 0.32 | -0.32 | ||
50 | AT1G09810 | evolutionarily conserved C-terminal region 11 | evolutionarily conserved C-terminal region 11 |
0.76 | 0.31 | -0.32 | ||
51 | AT2G28050 | Pentatricopeptide repeat (PPR) superfamily protein | 0.76 | 0.3 | -0.3 | |||
52 | AT3G51320 | Pentatricopeptide repeat (PPR) superfamily protein | 0.75 | 0.31 | -0.29 | |||
53 | AT1G06380 | Ribosomal protein L1p/L10e family | 0.75 | 0.35 | -0.32 | |||
54 | AT4G02510 | translocon at the outer envelope membrane of chloroplasts 159 |
ATTOC159, PLASTID PROTEIN IMPORT 2, translocon at the outer envelope membrane of chloroplasts 159, TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 160, TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 86 |
0.75 | 0.32 | -0.31 | ||
55 | AT1G01720 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Arabidopsis NAC domain containing protein 2, ATAF1 |
-0.75 | 0.3 | -0.33 | ||
56 | AT5G48180 | nitrile specifier protein 5 | nitrile specifier protein 5 | -0.75 | 0.3 | -0.3 | ||
57 | AT3G26460 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.75 | 0.32 | -0.29 | |||
58 | AT3G25120 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
0.74 | 0.32 | -0.29 | |||
59 | AT3G01610 | cell division cycle 48C | cell division cycle 48C, embryo defective 1354 |
0.74 | 0.32 | -0.31 | ||
60 | AT3G58470 | nucleic acid binding;methyltransferases | 0.74 | 0.3 | -0.31 | |||
61 | AT4G38740 | rotamase CYP 1 | rotamase CYP 1 | -0.74 | 0.32 | -0.33 | ||
62 | AT5G57900 | SKP1 interacting partner 1 | SKP1 interacting partner 1 | -0.74 | 0.31 | -0.31 | ||
63 | AT2G34780 | maternal effect embryo arrest 22 | EMBRYO DEFECTIVE 1611, MATERNAL EFFECT EMBRYO ARREST 22 |
0.74 | 0.31 | -0.31 | ||
64 | AT5G15760 | Ribosomal protein PSRP-3/Ycf65 | 0.74 | 0.32 | -0.3 | |||
65 | AT1G56070 | Ribosomal protein S5/Elongation factor G/III/V family protein |
LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 |
0.74 | 0.32 | -0.3 | ||
66 | AT1G47960 | cell wall / vacuolar inhibitor of fructosidase 1 | CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1, cell wall / vacuolar inhibitor of fructosidase 1 |
-0.74 | 0.33 | -0.31 | ||
67 | AT4G20980 | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) |
0.74 | 0.34 | -0.31 | |||
68 | AT3G51130 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
-0.74 | 0.31 | -0.34 | |||
69 | AT1G58180 | beta carbonic anhydrase 6 | A. THALIANA BETA CARBONIC ANHYDRASE 6, beta carbonic anhydrase 6 |
-0.73 | 0.34 | -0.34 | ||
70 | AT5G66250 | kinectin-related | -0.72 | 0.33 | -0.31 | |||
71 | AT4G01070 | UDP-Glycosyltransferase superfamily protein | GT72B1, UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1 |
-0.72 | 0.31 | -0.34 | ||
72 | AT1G06800 | alpha/beta-Hydrolases superfamily protein | phospholipase A I gamma 1 | -0.72 | 0.33 | -0.32 | ||
73 | AT3G06170 | Serinc-domain containing serine and sphingolipid biosynthesis protein |
-0.71 | 0.31 | -0.32 | |||
74 | AT2G24040 | Low temperature and salt responsive protein family | -0.71 | 0.32 | -0.32 | |||
75 | AT2G38740 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.71 | 0.32 | -0.32 | |||
76 | AT1G75280 | NmrA-like negative transcriptional regulator family protein | -0.7 | 0.34 | -0.32 | |||
77 | AT4G36830 | GNS1/SUR4 membrane protein family | HOS3-1 | -0.7 | 0.33 | -0.29 | ||
78 | AT5G40670 | PQ-loop repeat family protein / transmembrane family protein |
-0.7 | 0.32 | -0.32 | |||
79 | AT5G58740 | HSP20-like chaperones superfamily protein | -0.7 | 0.33 | -0.34 | |||
80 | AT1G54210 | Ubiquitin-like superfamily protein | AUTOPHAGY 12, ATATG12, AUTOPHAGY 12 A |
-0.69 | 0.32 | -0.3 | ||
81 | AT4G27470 | RING membrane-anchor 3 | ATRMA3, RING membrane-anchor 3 | -0.68 | 0.31 | -0.28 | ||
82 | AT4G05530 | indole-3-butyric acid response 1 | indole-3-butyric acid response 1, SHORT-CHAIN DEHYDROGENASE/REDUCTASE A |
-0.68 | 0.31 | -0.33 | ||
83 | AT5G63080 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.68 | 0.31 | -0.31 | |||
84 | AT1G66900 | alpha/beta-Hydrolases superfamily protein | -0.68 | 0.3 | -0.33 | |||
85 | AT1G24440 | RING/U-box superfamily protein | -0.68 | 0.31 | -0.33 | |||
86 | AT2G39450 | Cation efflux family protein | ATMTP11, MTP11 | -0.68 | 0.34 | -0.34 | ||
87 | AT5G05230 | RING/U-box superfamily protein | -0.67 | 0.3 | -0.31 | |||
88 | AT5G18170 | glutamate dehydrogenase 1 | glutamate dehydrogenase 1 | -0.67 | 0.32 | -0.3 | ||
89 | AT1G12200 | Flavin-binding monooxygenase family protein | flavin monooxygenase | -0.67 | 0.32 | -0.33 | ||
90 | AT4G17940 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.67 | 0.32 | -0.3 | |||
91 | AT1G50740 | Transmembrane proteins 14C | -0.67 | 0.32 | -0.32 | |||
92 | AT1G74590 | glutathione S-transferase TAU 10 | GLUTATHIONE S-TRANSFERASE TAU 10, glutathione S-transferase TAU 10 |
-0.67 | 0.33 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
93 | C0134 | Kaempferol-7-O-neohesperidoside | - | - | - | 0.8 | 0.46 | -0.44 |