AGICode | AT3G15630 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G15630 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.3 | -0.33 | |||
2 | AT3G49940 | LOB domain-containing protein 38 | LOB domain-containing protein 38 | 0.8 | 0.33 | -0.31 | ||
3 | AT5G22920 | CHY-type/CTCHY-type/RING-type Zinc finger protein | 0.79 | 0.32 | -0.29 | |||
4 | AT5G56870 | beta-galactosidase 4 | beta-galactosidase 4 | 0.79 | 0.3 | -0.33 | ||
5 | AT5G11700 | LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.78 | 0.31 | -0.31 | |||
6 | AT5G20250 | Raffinose synthase family protein | DARK INDUCIBLE 10, raffinose synthase 6 |
0.78 | 0.31 | -0.31 | ||
7 | AT4G33040 | Thioredoxin superfamily protein | -0.78 | 0.32 | -0.31 | |||
8 | AT5G24810 | ABC1 family protein | -0.77 | 0.32 | -0.31 | |||
9 | AT1G69610 | Protein of unknown function (DUF1666) | -0.76 | 0.35 | -0.33 | |||
10 | AT3G04030 | Homeodomain-like superfamily protein | -0.76 | 0.3 | -0.33 | |||
11 | AT3G62930 | Thioredoxin superfamily protein | 0.76 | 0.32 | -0.32 | |||
12 | AT3G14720 | MAP kinase 19 | ARABIDOPSIS THALIANA MAP KINASE 19, MAP kinase 19 |
-0.76 | 0.32 | -0.33 | ||
13 | AT2G43760 | molybdopterin biosynthesis MoaE family protein | 0.76 | 0.31 | -0.32 | |||
14 | AT5G51770 | Protein kinase superfamily protein | -0.72 | 0.33 | -0.32 | |||
15 | AT3G07160 | glucan synthase-like 10 | glucan synthase-like 10, CALS9, gsl10, glucan synthase-like 10 |
-0.71 | 0.34 | -0.3 | ||
16 | AT5G21170 | 5'-AMP-activated protein kinase beta-2 subunit protein | AKINBETA1 | 0.71 | 0.32 | -0.33 | ||
17 | AT2G43500 | Plant regulator RWP-RK family protein | -0.7 | 0.32 | -0.35 | |||
18 | AT5G58090 | O-Glycosyl hydrolases family 17 protein | 0.7 | 0.31 | -0.3 | |||
19 | AT5G53160 | regulatory components of ABA receptor 3 | PYR1-like 8, regulatory components of ABA receptor 3 |
0.7 | 0.3 | -0.3 | ||
20 | AT2G26980 | CBL-interacting protein kinase 3 | CBL-interacting protein kinase 3, SNF1-RELATED PROTEIN KINASE 3.17 |
0.7 | 0.29 | -0.33 | ||
21 | AT4G15690 | Thioredoxin superfamily protein | 0.69 | 0.32 | -0.31 | |||
22 | AT1G66390 | myb domain protein 90 | ATMYB90, myb domain protein 90, PRODUCTION OF ANTHOCYANIN PIGMENT 2 |
-0.69 | 0.3 | -0.31 | ||
23 | AT2G28320 | Pleckstrin homology (PH) and lipid-binding START domains-containing protein |
-0.69 | 0.35 | -0.31 | |||
24 | AT4G11240 | Calcineurin-like metallo-phosphoesterase superfamily protein |
TOPP7 | 0.68 | 0.3 | -0.33 | ||
25 | AT4G15700 | Thioredoxin superfamily protein | 0.68 | 0.31 | -0.31 | |||
26 | AT2G31810 | ACT domain-containing small subunit of acetolactate synthase protein |
0.68 | 0.3 | -0.31 | |||
27 | AT4G15660 | Thioredoxin superfamily protein | 0.68 | 0.29 | -0.3 | |||
28 | AT1G25550 | myb-like transcription factor family protein | 0.68 | 0.31 | -0.32 | |||
29 | AT3G47060 | FTSH protease 7 | FTSH protease 7 | -0.67 | 0.3 | -0.32 | ||
30 | AT1G09575 | Protein of unknown function (DUF607) | 0.67 | 0.33 | -0.34 | |||
31 | AT4G15680 | Thioredoxin superfamily protein | 0.67 | 0.33 | -0.31 | |||
32 | AT1G80460 | Actin-like ATPase superfamily protein | GLI1, nonhost resistance to P. s. phaseolicola 1 |
0.67 | 0.31 | -0.32 | ||
33 | AT5G61810 | Mitochondrial substrate carrier family protein | ATP/phosphate carrier 1 | -0.67 | 0.31 | -0.32 | ||
34 | AT1G65570 | Pectin lyase-like superfamily protein | 0.66 | 0.33 | -0.34 | |||
35 | AT5G59150 | RAB GTPase homolog A2D | ARABIDOPSIS RAB GTPASE HOMOLOG A2D, RAB GTPase homolog A2D, RAB GTPase homolog A2D |
0.66 | 0.31 | -0.32 | ||
36 | AT5G52410 | CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.66 | 0.31 | -0.32 | |||
37 | AT1G48260 | CBL-interacting protein kinase 17 | CBL-interacting protein kinase 17, SNF1-RELATED PROTEIN KINASE 3.21 |
-0.66 | 0.32 | -0.32 | ||
38 | AT1G13300 | myb-like transcription factor family protein | HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 |
0.66 | 0.29 | -0.3 | ||
39 | AT5G18600 | Thioredoxin superfamily protein | 0.66 | 0.34 | -0.35 | |||
40 | AT3G49790 | Carbohydrate-binding protein | 0.66 | 0.32 | -0.29 | |||
41 | AT3G59770 | sacI homology domain-containing protein / WW domain-containing protein |
ARABIDOPSIS THALIANA SUPPRESSOR OF ACTIN 9, SUPPRESSOR OF ACTIN 9 |
-0.66 | 0.31 | -0.31 | ||
42 | AT1G13920 | Remorin family protein | -0.66 | 0.31 | -0.31 | |||
43 | AT1G53100 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.66 | 0.31 | -0.31 | |||
44 | AT3G21670 | Major facilitator superfamily protein | -0.65 | 0.32 | -0.3 | |||
45 | AT2G03140 | alpha/beta-Hydrolases superfamily protein | -0.64 | 0.31 | -0.31 | |||
46 | AT4G00040 | Chalcone and stilbene synthase family protein | -0.64 | 0.31 | -0.31 | |||
47 | AT1G12780 | UDP-D-glucose/UDP-D-galactose 4-epimerase 1 | A. THALIANA UDP-GLC 4-EPIMERASE 1, UDP-D-glucose/UDP-D-galactose 4-epimerase 1 |
0.64 | 0.29 | -0.35 | ||
48 | AT5G26240 | chloride channel D | ATCLC-D, chloride channel D | -0.64 | 0.32 | -0.31 | ||
49 | AT5G62130 | Per1-like family protein | -0.64 | 0.31 | -0.3 | |||
50 | AT1G17440 | Transcription initiation factor TFIID subunit A | CYTOKININ-HYPERSENSITIVE 1, ENHANCED ETHYLENE RESPONSE 4, TBP-ASSOCIATED FACTOR 12B |
-0.64 | 0.29 | -0.34 | ||
51 | AT3G12580 | heat shock protein 70 | ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 |
-0.64 | 0.31 | -0.34 | ||
52 | AT5G04770 | cationic amino acid transporter 6 | ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6, cationic amino acid transporter 6 |
0.64 | 0.29 | -0.31 | ||
53 | AT4G11800 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.64 | 0.32 | -0.31 | |||
54 | AT1G11260 | sugar transporter 1 | SUGAR TRANSPORTER 1, sugar transporter 1 |
0.64 | 0.33 | -0.31 | ||
55 | AT5G16310 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 | UCH1 | 0.64 | 0.32 | -0.32 | ||
56 | AT3G15450 | Aluminium induced protein with YGL and LRDR motifs | 0.63 | 0.33 | -0.33 | |||
57 | AT5G43520 | Cysteine/Histidine-rich C1 domain family protein | 0.63 | 0.32 | -0.32 | |||
58 | AT5G65890 | ACT domain repeat 1 | ACT domain repeat 1 | -0.63 | 0.34 | -0.32 | ||
59 | AT4G01680 | myb domain protein 55 | myb domain protein 55, myb domain protein 55 |
0.63 | 0.32 | -0.33 | ||
60 | AT5G50800 | Nodulin MtN3 family protein | AtSWEET13, SWEET13 | -0.63 | 0.31 | -0.31 | ||
61 | AT5G51910 | TCP family transcription factor | 0.63 | 0.32 | -0.33 | |||
62 | AT5G56220 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.63 | 0.31 | -0.31 | |||
63 | AT1G48090 | calcium-dependent lipid-binding family protein | -0.63 | 0.33 | -0.31 | |||
64 | AT2G36850 | glucan synthase-like 8 | GLUCAN SYNTHASE-LIKE 8, ATGSL8, CHORUS, GSL08, glucan synthase-like 8 |
-0.63 | 0.31 | -0.31 | ||
65 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
-0.62 | 0.33 | -0.33 | |||
66 | AT3G12810 | SNF2 domain-containing protein / helicase domain-containing protein |
chr13, PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SRCAP |
-0.62 | 0.29 | -0.32 | ||
67 | AT5G19340 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink). |
0.62 | 0.32 | -0.31 | |||
68 | AT2G41790 | Insulinase (Peptidase family M16) family protein | -0.62 | 0.3 | -0.32 | |||
69 | AT5G64410 | oligopeptide transporter 4 | ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 4, oligopeptide transporter 4 |
0.62 | 0.3 | -0.31 | ||
70 | AT1G67360 | Rubber elongation factor protein (REF) | -0.62 | 0.29 | -0.31 | |||
71 | AT1G16170 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79660.1); Has 55 Blast hits to 55 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.31 | -0.33 | |||
72 | AT5G04470 | cyclin-dependent protein kinase inhibitors | SIAMESE | 0.62 | 0.31 | -0.33 | ||
73 | AT3G12150 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.62 | 0.31 | -0.33 | |||
74 | AT3G60550 | cyclin p3;2 | cyclin p3;2 | 0.62 | 0.29 | -0.31 | ||
75 | AT1G13670 | unknown protein; Has 22 Blast hits to 22 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.29 | -0.31 | |||
76 | AT1G07170 | PHF5-like protein | 0.61 | 0.31 | -0.28 | |||
77 | AT5G65480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.61 | 0.29 | -0.3 | |||
78 | AT3G61740 | SET domain protein 14 | ATX3, SET domain protein 14 | -0.61 | 0.32 | -0.33 | ||
79 | AT5G35190 | proline-rich extensin-like family protein | extensin 13 | 0.61 | 0.32 | -0.31 | ||
80 | AT1G49170 | Protein of unknown function (DUF167) | 0.61 | 0.3 | -0.33 | |||
81 | AT1G13700 | 6-phosphogluconolactonase 1 | 6-phosphogluconolactonase 1 | 0.61 | 0.31 | -0.32 | ||
82 | AT4G25835 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.61 | 0.32 | -0.32 | |||
83 | AT1G47210 | cyclin-dependent protein kinase 3;2 | cyclin-dependent protein kinase 3;2 |
0.61 | 0.32 | -0.33 | ||
84 | AT2G17880 | Chaperone DnaJ-domain superfamily protein | 0.61 | 0.31 | -0.32 | |||
85 | AT1G03687 | DTW domain-containing protein | 0.6 | 0.31 | -0.31 | |||
86 | AT4G30640 | RNI-like superfamily protein | 0.6 | 0.32 | -0.32 | |||
87 | AT3G48100 | response regulator 5 | response regulator 5, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, INDUCED BY CYTOKININ 6, response regulator 5 |
0.6 | 0.34 | -0.31 | ||
88 | AT2G27300 | NTM1-like 8 | Arabidopsis NAC domain containing protein 40, NTM1-like 8 |
-0.6 | 0.3 | -0.33 | ||
89 | AT2G29190 | pumilio 2 | pumilio 2, pumilio 2 | -0.6 | 0.31 | -0.32 | ||
90 | AT1G11380 | PLAC8 family protein | 0.6 | 0.32 | -0.29 | |||
91 | AT3G60200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.6 | 0.29 | -0.32 | |||
92 | AT1G60450 | galactinol synthase 7 | galactinol synthase 7, galactinol synthase 7 |
-0.6 | 0.3 | -0.32 | ||
93 | AT5G01620 | TRICHOME BIREFRINGENCE-LIKE 35 | TRICHOME BIREFRINGENCE-LIKE 35 | 0.6 | 0.31 | -0.34 | ||
94 | AT5G41330 | BTB/POZ domain with WD40/YVTN repeat-like protein | -0.59 | 0.31 | -0.33 | |||
95 | AT3G07420 | asparaginyl-tRNA synthetase 2 | ASPARAGINYL-TRNA SYNTHETASE 2, asparaginyl-tRNA synthetase 2, SYNTHETASE C2, ASPARAGINYL-TRNA SYNTHETASE 2 |
-0.59 | 0.31 | -0.31 | ||
96 | AT2G25530 | AFG1-like ATPase family protein | -0.59 | 0.32 | -0.31 | |||
97 | AT5G59380 | methyl-CPG-binding domain 6 | ATMBD6, methyl-CPG-binding domain 6 |
0.59 | 0.31 | -0.33 | ||
98 | AT1G12910 | Transducin/WD40 repeat-like superfamily protein | ANTHOCYANIN11, LIGHT-REGULATED WD 1 |
0.59 | 0.3 | -0.32 | ||
99 | AT2G46340 | SPA (suppressor of phyA-105) protein family | SUPPRESSOR OF PHYA-105 1 | -0.59 | 0.3 | -0.32 | ||
100 | AT3G55320 | P-glycoprotein 20 | ATP-binding cassette B20, P-glycoprotein 20 |
-0.59 | 0.32 | -0.32 | ||
101 | AT4G24240 | WRKY DNA-binding protein 7 | ATWRKY7, WRKY DNA-binding protein 7 |
0.59 | 0.3 | -0.31 | ||
102 | AT1G17350 | NADH:ubiquinone oxidoreductase intermediate-associated protein 30 |
0.59 | 0.31 | -0.31 | |||
103 | AT3G29760 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.59 | 0.32 | -0.31 | |||
104 | AT4G00900 | ER-type Ca2+-ATPase 2 | ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2, ER-type Ca2+-ATPase 2 |
-0.58 | 0.31 | -0.34 | ||
105 | AT3G14020 | nuclear factor Y, subunit A6 | nuclear factor Y, subunit A6 | -0.58 | 0.31 | -0.31 | ||
106 | AT1G30490 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
ATHB9, PHAVOLUTA | -0.58 | 0.3 | -0.31 | ||
107 | AT3G62860 | alpha/beta-Hydrolases superfamily protein | 0.58 | 0.3 | -0.34 | |||
108 | AT1G15020 | quiescin-sulfhydryl oxidase 1 | quiescin-sulfhydryl oxidase 1, QSO2, quiescin-sulfhydryl oxidase 1 |
0.58 | 0.3 | -0.33 | ||
109 | AT4G00231 | ARM repeat superfamily protein | maternal effect embryo arrest 50 | 0.58 | 0.29 | -0.31 | ||
110 | AT1G36160 | acetyl-CoA carboxylase 1 | acetyl-CoA carboxylase 1, AT-ACC1, EMBRYO DEFECTIVE 22, GURKE, GLOSSYHEAD 1, PASTICCINO 3 |
-0.58 | 0.33 | -0.3 | ||
111 | AT4G18130 | phytochrome E | phytochrome E | -0.58 | 0.35 | -0.33 | ||
112 | AT5G58870 | FTSH protease 9 | FTSH protease 9 | -0.58 | 0.32 | -0.31 | ||
113 | AT1G30110 | nudix hydrolase homolog 25 | nudix hydrolase homolog 25, nudix hydrolase homolog 25 |
0.58 | 0.32 | -0.33 | ||
114 | AT5G63620 | GroES-like zinc-binding alcohol dehydrogenase family protein |
0.58 | 0.32 | -0.33 | |||
115 | AT5G62920 | response regulator 6 | response regulator 6 | 0.58 | 0.3 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
116 | C0225 | Raffinose | D-(+)-Raffinose | Raffinose | ajugose biosynthesis II (galactinol-independent), stachyose biosynthesis, stachyose degradation |
-0.75 | 0.44 | -0.46 | ||
117 | C0168 | MST_2023.2 | - | - | - | -0.7 | 0.45 | -0.44 | ||
118 | C0098 | Glucose | D-Glucose | alpha-D-glucose; beta-D-glucose | trehalose degradation II (trehalase), indole glucosinolate breakdown (active in intact plant cell), coumarin biosynthesis (via 2-coumarate), glucosinolate biosynthesis from tryptophan, sinapate ester biosynthesis, GDP-glucose biosynthesis, coniferin metabolism, melibiose degradation, indole glucosinolate breakdown (insect chewing induced) |
-0.63 | 0.31 | -0.31 | ||
119 | C0092 | Fumaric acid | - | Fumarate | citrulline-nitric oxide cycle, succinate + a ubiquinone -> a ubiquinol + fumarate, superpathway of glyoxylate cycle and fatty acid degradation, tyrosine degradation I, aerobic respiration (alternative oxidase pathway), inosine-5'-phosphate biosynthesis II, arginine biosynthesis I, TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), purine nucleotide metabolism (phosphotransfer and nucleotide modification), purine nucleotides de novo biosynthesis II, arginine biosynthesis II (acetyl cycle), urea cycle, aerobic respiration (cytochrome c) |
-0.62 | 0.31 | -0.31 |