AT3G27700 : -
Query Information
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AGICode AT3G27700
Description zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 1 0.29 -0.3
2 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 -0.76 0.3 -0.29
3 AT5G22550 Plant protein of unknown function (DUF247) 0.72 0.32 -0.31
4 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative		 0.72 0.34 -0.35
5 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.32 -0.31
6 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.71 0.31 -0.28
7 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 0.71 0.3 -0.31
8 AT3G15890 Protein kinase superfamily protein -0.7 0.32 -0.3
9 AT1G72960 Root hair defective 3 GTP-binding protein (RHD3) -0.7 0.35 -0.33
10 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 0.7 0.34 -0.34
11 AT1G70180 Sterile alpha motif (SAM) domain-containing protein 0.69 0.33 -0.31
12 AT1G43900 Protein phosphatase 2C family protein 0.69 0.32 -0.31
13 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 0.69 0.32 -0.32
14 AT5G65520 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.3 -0.3
15 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.31 -0.29
16 AT1G35380 transposable element gene -0.67 0.32 -0.32
17 AT2G43420 3-beta hydroxysteroid dehydrogenase/isomerase family
protein		 0.67 0.31 -0.31
18 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.67 0.3 -0.32
19 AT1G51880 root hair specific 6 root hair specific 6 -0.67 0.31 -0.33
20 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.31 -0.31
21 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 0.67 0.31 -0.29
22 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.66 0.31 -0.3
23 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).		 0.66 0.32 -0.3
24 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 0.66 0.33 -0.3
25 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 0.66 0.33 -0.32
26 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 0.66 0.3 -0.32
27 AT4G39160 Homeodomain-like superfamily protein 0.65 0.3 -0.32
28 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.65 0.32 -0.3
29 AT1G46336 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.3
30 AT5G35710 transposable element gene -0.65 0.29 -0.3
31 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein -0.65 0.31 -0.35
32 AT1G26110 decapping 5 decapping 5 0.64 0.28 -0.36
33 AT3G17620 F-box and associated interaction domains-containing protein -0.64 0.31 -0.3
34 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 -0.64 0.32 -0.32
35 AT3G30846 transposable element gene -0.64 0.32 -0.31
36 AT3G11040 Glycosyl hydrolase family 85 AtENGase85B,
Endo-beta-N-acetyglucosaminidase
85B		 0.64 0.31 -0.31
37 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.64 0.31 -0.32
38 AT5G51900 Cytochrome P450 family protein -0.64 0.3 -0.3
39 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.64 0.3 -0.31
40 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.64 0.33 -0.31
41 AT3G32940 RNA-binding KH domain-containing protein 0.63 0.31 -0.34
42 AT5G58850 myb domain protein 119 MYB DOMAIN PROTEIN 119, myb domain
protein 119		 -0.63 0.33 -0.32
43 AT5G66030 Golgi-localized GRIP domain-containing protein ATGRIP, GRIP 0.63 0.32 -0.33
44 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.63 0.29 -0.32
45 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.63 0.28 -0.32
46 AT1G71010 FORMS APLOID AND BINUCLEATE CELLS 1C FORMS APLOID AND BINUCLEATE CELLS
1C		 0.63 0.33 -0.31
47 AT1G32320 MAP kinase kinase 10 MAP kinase kinase 10, MAP kinase
kinase 10		 -0.63 0.33 -0.29
48 AT1G32650 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.63 0.3 -0.32
49 AT4G35930 F-box family protein -0.63 0.33 -0.31
50 AT3G29640 transposable element gene -0.63 0.33 -0.33
51 AT5G34895 transposable element gene -0.62 0.32 -0.32
52 AT2G37650 GRAS family transcription factor 0.62 0.31 -0.33
53 AT2G32850 Protein kinase superfamily protein 0.62 0.34 -0.33
54 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.62 0.34 -0.31
55 AT3G29690 HXXXD-type acyl-transferase family protein -0.62 0.33 -0.31
56 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.34 -0.31
57 AT3G12380 actin-related protein 5 actin-related protein 5,
ACTIN-RELATED PROTEIN 5		 0.62 0.36 -0.31
58 AT3G18650 AGAMOUS-like 103 AGAMOUS-like 103 0.62 0.32 -0.3
59 AT3G62640 Protein of unknown function (DUF3511) 0.62 0.33 -0.33
60 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.62 0.31 -0.3
61 AT4G25970 phosphatidylserine decarboxylase 3 phosphatidylserine decarboxylase 3 0.62 0.32 -0.32
62 AT4G13020 Protein kinase superfamily protein MHK 0.62 0.32 -0.28
63 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily -0.61 0.31 -0.36
64 AT5G26330 Cupredoxin superfamily protein -0.61 0.3 -0.32
65 AT3G26614 transposable element gene 0.61 0.32 -0.29
66 AT3G44760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.61 0.32 -0.3
67 AT3G08890 Protein of unknown function, DUF538 -0.61 0.29 -0.3
68 AT2G34440 AGAMOUS-like 29 AGAMOUS-like 29 -0.61 0.32 -0.32
69 AT3G10820 Transcription elongation factor (TFIIS) family protein -0.61 0.34 -0.31
70 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.61 0.31 -0.33
71 AT2G02380 glutathione S-transferase (class zeta) 2 glutathione S-transferase (class
zeta) 2, glutathione S-transferase
(class zeta) 2		 0.61 0.31 -0.32
72 AT1G55450 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.6 0.33 -0.32
73 AT3G59910 Ankyrin repeat family protein 0.6 0.33 -0.29
74 AT1G62260 mitochondrial editing factor 9 mitochondrial editing factor 9 0.6 0.34 -0.33
75 AT4G29340 profilin 4 profilin 4 -0.6 0.3 -0.31
76 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.6 0.34 -0.3
77 AT1G13680 PLC-like phosphodiesterases superfamily protein 0.6 0.31 -0.34
78 AT3G03510 Phototropic-responsive NPH3 family protein 0.6 0.33 -0.32
79 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein 0.6 0.32 -0.3
80 AT1G79830 golgin candidate 5 golgin candidate 5 0.6 0.32 -0.31
81 AT5G52760 Copper transport protein family -0.6 0.3 -0.31
82 AT2G14570 transposable element gene 0.6 0.31 -0.32
83 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.6 0.32 -0.31
84 AT2G23160 F-box family protein 0.6 0.31 -0.32
85 AT1G64290 F-box protein-related -0.59 0.32 -0.31
86 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein 0.59 0.31 -0.34
87 AT1G57650 ATP binding 0.59 0.32 -0.31
88 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 0.59 0.32 -0.32
89 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.59 0.32 -0.31
90 AT5G26920 Cam-binding protein 60-like G Cam-binding protein 60-like G -0.59 0.33 -0.29
91 ATMG01410 open reading frame 204 open reading frame 204 -0.59 0.31 -0.32
92 AT3G06250 FAR1-related sequence 7 FAR1-related sequence 7 0.59 0.31 -0.33
93 AT2G26850 F-box family protein -0.59 0.31 -0.33
94 AT2G43270 F-box and associated interaction domains-containing protein -0.59 0.32 -0.33
95 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 -0.59 0.31 -0.29
96 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 -0.58 0.32 -0.32
97 AT3G51920 calmodulin 9 ATCML9, calmodulin 9, CALMODULIN
LIKE PROTEIN 9		 -0.58 0.34 -0.31
98 AT3G58080 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.32 -0.31
99 AT3G09735 S1FA-like DNA-binding protein -0.58 0.32 -0.31
100 AT5G48710 Ubiquitin-like superfamily protein -0.58 0.31 -0.31
101 AT1G26310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 10, CAULIFLOWER, CAL1 -0.58 0.32 -0.32
102 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.3 -0.3
103 AT5G07040 RING/U-box superfamily protein -0.58 0.32 -0.32
104 AT4G04120 transposable element gene -0.58 0.3 -0.29
105 AT1G05990 EF hand calcium-binding protein family ROOT HAIR SPECIFIC 1 -0.57 0.3 -0.34
106 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 -0.57 0.33 -0.31
107 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 -0.57 0.31 -0.32
108 AT1G71760 unknown protein; Has 92 Blast hits to 92 proteins in 41
species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).		 -0.57 0.32 -0.33
109 AT3G46900 copper transporter 2 copper transporter 2 -0.57 0.34 -0.29
110 AT5G28210 mRNA capping enzyme family protein -0.57 0.31 -0.32
111 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.3 -0.32
112 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family -0.57 0.31 -0.31
113 AT1G05770 Mannose-binding lectin superfamily protein -0.57 0.3 -0.32
114 AT4G09960 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 11, SEEDSTICK -0.57 0.29 -0.31
115 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.57 0.32 -0.32
116 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.57 0.3 -0.32
117 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 -0.57 0.31 -0.32
118 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.56 0.32 -0.32
119 AT3G23680 F-box associated ubiquitination effector family protein -0.56 0.31 -0.3
120 AT2G17950 Homeodomain-like superfamily protein PGA6, WUSCHEL, WUSCHEL 1 -0.56 0.32 -0.31
121 ATMG00050 hypothetical protein ORF131 -0.56 0.31 -0.32
122 AT3G48650 pseudogene, At14a-related protein, similar to At14a
(GI:11994571 and GI:11994573) (Arabidopsis thaliana)		 -0.56 0.31 -0.32
123 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein -0.56 0.32 -0.32
124 AT5G44880 transposable element gene -0.56 0.32 -0.31