AT3G16080 : -
Query Information
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AGICode AT3G16080
Description Zinc-binding ribosomal protein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16080 Zinc-binding ribosomal protein family protein 1 0.31 -0.32
2 AT5G47210 Hyaluronan / mRNA binding family 0.9 0.3 -0.3
3 AT3G23390 Zinc-binding ribosomal protein family protein 0.89 0.32 -0.3
4 AT5G56710 Ribosomal protein L31e family protein 0.88 0.32 -0.31
5 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.88 0.31 -0.32
6 AT2G19750 Ribosomal protein S30 family protein 0.87 0.33 -0.31
7 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.87 0.31 -0.3
8 AT1G27400 Ribosomal protein L22p/L17e family protein 0.86 0.33 -0.3
9 AT2G33370 Ribosomal protein L14p/L23e family protein 0.86 0.31 -0.32
10 AT3G59540 Ribosomal L38e protein family 0.86 0.33 -0.31
11 AT5G67510 Translation protein SH3-like family protein 0.86 0.32 -0.3
12 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 0.86 0.32 -0.33
13 AT1G52300 Zinc-binding ribosomal protein family protein 0.86 0.33 -0.34
14 AT4G29410 Ribosomal L28e protein family 0.86 0.31 -0.29
15 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.86 0.31 -0.31
16 AT3G25520 ribosomal protein L5 ribosomal protein L5, OLIGOCELLULA
5, PIGGYBACK3, RIBOSOMAL PROTEIN
L5 A		 0.86 0.32 -0.3
17 AT3G60245 Zinc-binding ribosomal protein family protein 0.86 0.31 -0.29
18 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 0.86 0.33 -0.34
19 AT3G06680 Ribosomal L29e protein family 0.86 0.32 -0.33
20 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.86 0.3 -0.33
21 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.85 0.31 -0.33
22 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.85 0.31 -0.33
23 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.85 0.31 -0.33
24 AT1G26880 Ribosomal protein L34e superfamily protein 0.85 0.32 -0.33
25 AT3G07110 Ribosomal protein L13 family protein 0.85 0.33 -0.35
26 AT3G09630 Ribosomal protein L4/L1 family 0.85 0.32 -0.32
27 AT3G06700 Ribosomal L29e protein family 0.85 0.32 -0.32
28 AT4G34555 Ribosomal protein S25 family protein 0.84 0.32 -0.32
29 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 0.84 0.31 -0.32
30 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.84 0.32 -0.32
31 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.84 0.3 -0.31
32 AT3G28900 Ribosomal protein L34e superfamily protein 0.84 0.31 -0.31
33 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.84 0.33 -0.29
34 AT4G17390 Ribosomal protein L23/L15e family protein 0.84 0.33 -0.31
35 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.84 0.34 -0.32
36 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.83 0.3 -0.3
37 AT3G57490 Ribosomal protein S5 family protein 0.83 0.31 -0.31
38 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.83 0.3 -0.31
39 AT5G59850 Ribosomal protein S8 family protein 0.83 0.31 -0.31
40 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.83 0.29 -0.31
41 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.83 0.3 -0.31
42 AT4G26230 Ribosomal protein L31e family protein 0.83 0.31 -0.33
43 AT3G22230 Ribosomal L27e protein family 0.83 0.33 -0.31
44 AT3G13230 RNA-binding KH domain-containing protein 0.83 0.31 -0.3
45 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.82 0.31 -0.31
46 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.82 0.31 -0.29
47 AT4G25890 60S acidic ribosomal protein family 0.82 0.31 -0.32
48 AT4G17520 Hyaluronan / mRNA binding family 0.82 0.32 -0.33
49 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.82 0.32 -0.31
50 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.82 0.33 -0.32
51 AT5G50310 Galactose oxidase/kelch repeat superfamily protein 0.82 0.32 -0.3
52 AT5G61130 plasmodesmata callose-binding protein 1 plasmodesmata callose-binding
protein 1		 0.81 0.31 -0.31
53 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.81 0.33 -0.32
54 AT2G37600 Ribosomal protein L36e family protein 0.81 0.31 -0.32
55 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.81 0.32 -0.32
56 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.81 0.31 -0.32
57 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.81 0.3 -0.33
58 AT5G27440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.81 0.3 -0.3
59 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.81 0.32 -0.3
60 AT4G30840 Transducin/WD40 repeat-like superfamily protein 0.81 0.31 -0.29
61 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.8 0.33 -0.34
62 AT3G10250 Plant protein 1589 of unknown function -0.8 0.32 -0.3
63 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.8 0.31 -0.32
64 AT5G16130 Ribosomal protein S7e family protein 0.8 0.31 -0.3
65 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.8 0.31 -0.3
66 AT5G02870 Ribosomal protein L4/L1 family 0.8 0.31 -0.31
67 AT4G33865 Ribosomal protein S14p/S29e family protein 0.8 0.32 -0.32
68 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.8 0.32 -0.31
69 AT5G42050 DCD (Development and Cell Death) domain protein -0.8 0.34 -0.32
70 AT3G06610 DNA-binding enhancer protein-related 0.8 0.31 -0.31
71 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.8 0.3 -0.33
72 AT1G72550 tRNA synthetase beta subunit family protein 0.8 0.3 -0.3
73 AT5G65860 ankyrin repeat family protein 0.8 0.31 -0.31
74 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 0.79 0.31 -0.3
75 AT1G08360 Ribosomal protein L1p/L10e family 0.79 0.31 -0.33
76 AT3G17000 ubiquitin-conjugating enzyme 32 ubiquitin-conjugating enzyme 32 -0.79 0.34 -0.31
77 AT3G52580 Ribosomal protein S11 family protein 0.79 0.32 -0.31
78 AT1G01100 60S acidic ribosomal protein family 0.79 0.3 -0.32
79 AT5G04040 Patatin-like phospholipase family protein SUGAR-DEPENDENT1 -0.79 0.32 -0.31
80 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.31 -0.32
81 AT1G50940 electron transfer flavoprotein alpha electron transfer flavoprotein
alpha		 -0.79 0.31 -0.31
82 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.79 0.3 -0.35
83 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.79 0.33 -0.31
84 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 0.79 0.31 -0.3
85 AT3G20240 Mitochondrial substrate carrier family protein 0.79 0.33 -0.28
86 AT3G56090 ferritin 3 ferritin 3, ferritin 3 0.79 0.31 -0.3
87 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.78 0.32 -0.34
88 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 -0.78 0.31 -0.31
89 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.78 0.3 -0.32
90 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.78 0.34 -0.32
91 AT3G44100 MD-2-related lipid recognition domain-containing protein -0.77 0.33 -0.31
92 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.33 -0.31
93 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.77 0.31 -0.32
94 AT1G65430 IBR domain-containing protein ARIADNE 8, ARABIDOPSIS ARIADNE 8 -0.77 0.32 -0.34
95 AT1G09500 NAD(P)-binding Rossmann-fold superfamily protein -0.77 0.3 -0.32
96 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.77 0.31 -0.31
97 AT3G47960 Major facilitator superfamily protein -0.77 0.3 -0.33
98 AT1G12050 fumarylacetoacetase, putative -0.76 0.3 -0.34
99 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.76 0.31 -0.32
100 AT5G10650 RING/U-box superfamily protein -0.76 0.3 -0.33
101 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 -0.76 0.31 -0.29
102 AT1G18270 ketose-bisphosphate aldolase class-II family protein -0.76 0.32 -0.32
103 AT2G27830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits
to 131 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.31
104 AT1G05840 Eukaryotic aspartyl protease family protein -0.75 0.29 -0.34
105 AT5G38895 RING/U-box superfamily protein -0.75 0.33 -0.34
106 AT3G53960 Major facilitator superfamily protein -0.75 0.32 -0.3
107 AT3G52800 A20/AN1-like zinc finger family protein -0.75 0.34 -0.28
108 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.75 0.32 -0.31
109 AT3G55070 LisH/CRA/RING-U-box domains-containing protein -0.74 0.31 -0.32
110 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 -0.74 0.33 -0.3
111 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.74 0.33 -0.33
112 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.74 0.31 -0.35
113 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.74 0.33 -0.32
114 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a -0.74 0.31 -0.31
115 AT1G71080 RNA polymerase II transcription elongation factor -0.74 0.31 -0.32
116 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.74 0.33 -0.31
117 AT1G64660 methionine gamma-lyase methionine gamma-lyase, methionine
gamma-lyase		 -0.74 0.31 -0.33
118 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.74 0.3 -0.32
119 AT3G06500 Plant neutral invertase family protein alkaline/neutral invertase C -0.73 0.31 -0.32
120 AT1G01710 Acyl-CoA thioesterase family protein -0.73 0.32 -0.34
121 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.73 0.31 -0.31
122 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 -0.73 0.3 -0.32
123 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.73 0.32 -0.29
124 AT1G52000 Mannose-binding lectin superfamily protein -0.73 0.32 -0.31
125 AT5G58740 HSP20-like chaperones superfamily protein -0.73 0.32 -0.32
126 AT3G14050 RELA/SPOT homolog 2 RELA-SPOT HOMOLOG 2, RELA/SPOT
HOMOLOG 2, RELA/SPOT homolog 2		 -0.72 0.34 -0.33
127 AT5G24420 6-phosphogluconolactonase 5 6-phosphogluconolactonase 5 -0.72 0.33 -0.32
128 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.72 0.3 -0.33
129 AT1G49670 ARP protein (REF) NQR -0.71 0.3 -0.34
130 AT1G74920 aldehyde dehydrogenase 10A8 aldehyde dehydrogenase 10A8 -0.71 0.33 -0.31
131 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.71 0.3 -0.29
132 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.71 0.31 -0.29
133 AT5G01990 Auxin efflux carrier family protein -0.71 0.32 -0.32
134 AT2G20920 Protein of unknown function (DUF3353) -0.71 0.3 -0.32
135 AT5G13810 Glutaredoxin family protein -0.71 0.32 -0.3
136 AT3G01400 ARM repeat superfamily protein -0.71 0.31 -0.32
137 AT2G22690 zinc ion binding -0.71 0.31 -0.33
138 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.71 0.3 -0.33
139 AT2G28400 Protein of unknown function, DUF584 -0.71 0.32 -0.32
140 AT1G78080 related to AP2 4 related to AP2 4, wound induced
dedifferentiation 1		 -0.71 0.31 -0.33
141 AT5G06370 NC domain-containing protein-related -0.71 0.3 -0.3
142 AT5G66050 Wound-responsive family protein -0.71 0.32 -0.31