AT3G22840 : ELIP
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G22840
Description Chlorophyll A-B binding family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G22840 Chlorophyll A-B binding family protein ELIP, EARLY LIGHT-INDUCABLE
PROTEIN		 1 0.32 -0.31
2 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 0.83 0.32 -0.3
3 AT4G17550 Major facilitator superfamily protein glycerol-3-phosphate permease 4,
glycerol-3-phosphate permease 4		 0.79 0.3 -0.33
4 AT5G14570 high affinity nitrate transporter 2.7 high affinity nitrate transporter
2.7, high affinity nitrate
transporter 2.7		 0.78 0.31 -0.3
5 AT5G52640 heat shock protein 90.1 ATHS83, HEAT SHOCK PROTEIN 90-1,
heat shock protein 90.1, HEAT
SHOCK PROTEIN 81-1, HSP81.1, HEAT
SHOCK PROTEIN 83, heat shock
protein 90.1		 0.77 0.32 -0.29
6 AT1G32860 Glycosyl hydrolase superfamily protein 0.76 0.3 -0.32
7 AT4G27940 manganese tracking factor for mitochondrial SOD2 ARABIDOPSIS MANGANESE TRACKING
FACTOR FOR MITOCHONDRIAL SOD2,
manganese tracking factor for
mitochondrial SOD2		 0.75 0.31 -0.32
8 AT4G23630 VIRB2-interacting protein 1 VIRB2-interacting protein 1,
Reticulan like protein B1		 0.73 0.32 -0.32
9 AT2G25530 AFG1-like ATPase family protein 0.72 0.3 -0.3
10 AT3G07390 auxin-responsive family protein Auxin-Induced in Root cultures 12 0.71 0.33 -0.31
11 AT2G16890 UDP-Glycosyltransferase superfamily protein 0.71 0.31 -0.31
12 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 0.7 0.3 -0.32
13 AT5G24460 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.32 -0.29
14 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 0.7 0.3 -0.32
15 AT3G21560 UDP-Glycosyltransferase superfamily protein UGT84A2 0.69 0.31 -0.32
16 AT4G00780 TRAF-like family protein -0.69 0.31 -0.34
17 AT4G11220 VIRB2-interacting protein 2 VIRB2-interacting protein 2,
Reticulan like protein B2		 0.69 0.33 -0.32
18 AT3G52740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits
to 65 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.3 -0.32
19 AT5G20180 Ribosomal protein L36 0.69 0.32 -0.33
20 AT4G03430 pre-mRNA splicing factor-related EMBRYO DEFECTIVE 2770, STABILIZED
1		 0.69 0.32 -0.32
21 AT3G48360 BTB and TAZ domain protein 2 ATBT2, BTB and TAZ domain protein
2		 -0.68 0.31 -0.3
22 AT3G55120 Chalcone-flavanone isomerase family protein A11, CHALCONE FLAVANONE ISOMERASE,
TRANSPARENT TESTA 5		 0.68 0.32 -0.32
23 AT4G30470 NAD(P)-binding Rossmann-fold superfamily protein 0.68 0.32 -0.33
24 AT5G20830 sucrose synthase 1 ASUS1, atsus1, sucrose synthase 1 0.68 0.31 -0.34
25 AT5G47060 Protein of unknown function (DUF581) 0.68 0.32 -0.31
26 AT5G17190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.31 -0.3
27 AT4G02880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03290.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.32 -0.3
28 AT2G31190 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 2, weak auxin
response1		 -0.67 0.29 -0.32
29 AT3G27570 Sucrase/ferredoxin-like family protein 0.67 0.32 -0.3
30 AT1G09415 NIM1-interacting 3 NIM1-interacting 3 -0.67 0.31 -0.32
31 AT5G51410 LUC7 N_terminus domain-containing protein 0.67 0.31 -0.31
32 AT1G02330 CONTAINS InterPro DOMAIN/s: Hepatocellular
carcinoma-associated antigen 59 (InterPro:IPR010756); Has
1239 Blast hits to 998 proteins in 204 species: Archae - 4;
Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87;
Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).		 0.67 0.29 -0.33
33 AT3G09440 Heat shock protein 70 (Hsp 70) family protein 0.67 0.3 -0.31
34 AT1G21120 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 2		 0.67 0.31 -0.3
35 AT1G67360 Rubber elongation factor protein (REF) 0.67 0.33 -0.34
36 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.32
37 AT2G12550 ubiquitin-associated (UBA)/TS-N domain-containing protein homolog of human NUB1 0.66 0.33 -0.29
38 AT4G30935 WRKY DNA-binding protein 32 ATWRKY32, WRKY DNA-binding protein
32		 0.66 0.29 -0.32
39 AT1G21980 phosphatidylinositol-4-phosphate 5-kinase 1 phosphatidylinositol-4-phosphate
5-kinase 1, ATPIPK1,
phosphatidylinositol-4-phosphate
5-kinase 1		 0.66 0.31 -0.31
40 AT4G14900 FRIGIDA-like protein 0.66 0.32 -0.31
41 AT2G23910 NAD(P)-binding Rossmann-fold superfamily protein 0.66 0.35 -0.3
42 AT3G12580 heat shock protein 70 ARABIDOPSIS HEAT SHOCK PROTEIN 70,
heat shock protein 70		 0.66 0.31 -0.31
43 AT2G39570 ACT domain-containing protein ACT domain repeats 9 -0.66 0.33 -0.32
44 AT2G41000 Chaperone DnaJ-domain superfamily protein 0.65 0.31 -0.32
45 AT1G32870 NAC domain protein 13 Arabidopsis NAC domain containing
protein 13, NAC domain protein 13,
NAC domain protein 13		 0.65 0.3 -0.3
46 AT3G60910 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.31 -0.32
47 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 -0.65 0.31 -0.31
48 AT1G71990 fucosyltransferase 13 ARABIDOPSIS FUCOSYLTRANSFERASE 4,
ATFUT13, FT4-M, FUCTC,
fucosyltransferase 13		 -0.65 0.28 -0.3
49 AT3G51240 flavanone 3-hydroxylase F3'H, flavanone 3-hydroxylase,
TRANSPARENT TESTA 6		 0.65 0.3 -0.3
50 AT1G03905 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette I19 0.65 0.33 -0.34
51 AT3G09410 Pectinacetylesterase family protein -0.65 0.34 -0.32
52 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.65 0.32 -0.32
53 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.32
54 AT3G19400 Cysteine proteinases superfamily protein -0.64 0.3 -0.3
55 AT2G33730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.33 -0.31
56 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c 0.64 0.33 -0.31
57 AT5G05270 Chalcone-flavanone isomerase family protein 0.64 0.32 -0.32
58 AT5G64170 dentin sialophosphoprotein-related 0.64 0.31 -0.31
59 AT4G30830 Protein of unknown function, DUF593 0.63 0.3 -0.31
60 AT1G29260 peroxin 7 ARABIDOPSIS PEROXIN 7, peroxin 7 -0.63 0.33 -0.3
61 AT2G25620 DNA-binding protein phosphatase 1 DNA-binding protein phosphatase 1,
DNA-binding protein phosphatase 1		 0.63 0.31 -0.34
62 AT5G02590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.31 -0.33
63 AT4G34990 myb domain protein 32 myb domain protein 32, myb domain
protein 32		 0.63 0.33 -0.33
64 AT5G01600 ferretin 1 ARABIDOPSIS THALIANA FERRETIN 1,
ferretin 1		 0.63 0.32 -0.33
65 AT5G43860 chlorophyllase 2 ARABIDOPSIS THALIANA
CHLOROPHYLLASE 2, chlorophyllase 2		 0.63 0.3 -0.32
66 AT3G19030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pyridoxine biosynthetic process, homoserine
biosynthetic process; LOCATED IN: endomembrane system;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.31 -0.32
67 AT5G54470 B-box type zinc finger family protein 0.62 0.33 -0.3
68 AT3G46880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G59080.1); Has 51 Blast
hits to 51 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.29 -0.32
69 AT5G13930 Chalcone and stilbene synthase family protein ATCHS, CHALCONE SYNTHASE,
TRANSPARENT TESTA 4		 0.62 0.33 -0.32
70 AT2G31790 UDP-Glycosyltransferase superfamily protein -0.62 0.31 -0.3
71 AT3G57050 cystathionine beta-lyase cystathionine beta-lyase -0.62 0.29 -0.32
72 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 0.62 0.32 -0.31
73 AT1G18660 zinc finger (C3HC4-type RING finger) family protein 0.62 0.31 -0.32
74 AT1G74700 tRNAse Z1 NUZ, tRNAse Z1 0.62 0.33 -0.33
75 AT5G51430 conserved oligomeric Golgi complex component-related / COG
complex component-related		 EMBRYO YELLOW 0.61 0.31 -0.31
76 AT5G64880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.3 -0.32
77 AT2G40950 Basic-leucine zipper (bZIP) transcription factor family
protein		 BZIP17 0.61 0.31 -0.32
78 AT1G48160 signal recognition particle 19 kDa protein, putative /
SRP19, putative		 -0.61 0.33 -0.33
79 AT3G11280 Duplicated homeodomain-like superfamily protein -0.61 0.3 -0.31
80 AT4G37760 squalene epoxidase 3 squalene epoxidase 3 0.61 0.31 -0.3
81 AT5G50200 nitrate transmembrane transporters ATNRT3.1, NITRATE TRANSPORTER 3.1,
WOUND-RESPONSIVE 3		 0.61 0.32 -0.31
82 AT1G35470 SPla/RYanodine receptor (SPRY) domain-containing protein -0.61 0.33 -0.34
83 AT4G00880 SAUR-like auxin-responsive protein family -0.61 0.31 -0.31
84 AT5G14220 Flavin containing amine oxidoreductase family HEMG2, MATERNAL EFFECT EMBRYO
ARREST 61, PPO2		 -0.61 0.34 -0.3
85 AT5G22530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G22520.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.31 -0.31
86 AT1G10770 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.6 0.31 -0.31
87 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.6 0.33 -0.33
88 AT1G19140 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ubiquinone biosynthetic process; LOCATED IN: mitochondrion;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: COQ9
(InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9
(InterPro:IPR012762); Has 748 Blast hits to 748 proteins in
260 species: Archae - 0; Bacteria - 218; Metazoa - 126;
Fungi - 101; Plants - 39; Viruses - 0; Other Eukaryotes -
264 (source: NCBI BLink).		 0.6 0.31 -0.3
89 AT2G46330 arabinogalactan protein 16 arabinogalactan protein 16,
ATAGP16		 -0.6 0.29 -0.32
90 AT1G30070 SGS domain-containing protein 0.6 0.33 -0.31
91 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 -0.6 0.29 -0.3
92 AT5G15910 NAD(P)-binding Rossmann-fold superfamily protein 0.6 0.31 -0.32
93 AT5G47430 DWNN domain, a CCHC-type zinc finger 0.6 0.32 -0.32
94 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.32
95 AT3G09470 Major facilitator superfamily protein -0.59 0.3 -0.34
96 AT2G14910 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in
102 species: Archae - 0; Bacteria - 300; Metazoa - 25;
Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191
(source: NCBI BLink).		 -0.59 0.32 -0.3
97 AT5G67150 HXXXD-type acyl-transferase family protein -0.59 0.34 -0.31
98 AT2G23570 methyl esterase 19 ARABIDOPSIS THALIANA METHYL
ESTERASE 19, methyl esterase 19		 -0.58 0.31 -0.3
99 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.34 -0.31
100 AT5G05700 arginine-tRNA protein transferase 1 ATATE1, arginine-tRNA protein
transferase 1, DELAYED LEAF
SENESCENCE 1		 -0.58 0.3 -0.33
101 AT1G12730 GPI transamidase subunit PIG-U -0.58 0.31 -0.32
102 AT1G08980 amidase 1 amidase 1, AMIDASE-LIKE PROTEIN 1,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-I, TRANSLOCON AT THE OUTER
MEMBRANE OF CHLOROPLASTS 64-I		 -0.58 0.31 -0.33
103 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 -0.58 0.32 -0.32
104 AT2G33480 NAC domain containing protein 41 NAC domain containing protein 41,
NAC domain containing protein 41		 -0.58 0.33 -0.31
105 AT2G17530 Protein kinase superfamily protein -0.57 0.35 -0.31
106 AT1G34545 transposable element gene -0.57 0.3 -0.32
107 AT3G58890 RNI-like superfamily protein -0.57 0.31 -0.31
108 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 -0.57 0.31 -0.31
109 AT4G37610 BTB and TAZ domain protein 5 BTB and TAZ domain protein 5 -0.57 0.31 -0.34
110 AT2G41760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function WDYHV (InterPro:IPR019161); Has 201 Blast
hits to 201 proteins in 90 species: Archae - 0; Bacteria -
2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 -0.57 0.32 -0.33
111 AT3G03190 glutathione S-transferase F11 glutathione S-transferase F11,
ARABIDOPSIS
GLUTATHIONE-S-TRANSFERASE 6,
glutathione S-transferase F11		 -0.57 0.33 -0.31
112 AT1G53680 glutathione S-transferase TAU 28 glutathione S-transferase TAU 28,
glutathione S-transferase TAU 28		 -0.56 0.32 -0.31
113 AT1G21440 Phosphoenolpyruvate carboxylase family protein -0.56 0.32 -0.32
114 AT1G19170 Pectin lyase-like superfamily protein -0.56 0.31 -0.28
115 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.56 0.33 -0.31
116 AT1G11160 Transducin/WD40 repeat-like superfamily protein -0.56 0.31 -0.3
117 AT3G18990 AP2/B3-like transcriptional factor family protein REPRODUCTIVE MERISTEM 39, REDUCED
VERNALIZATION RESPONSE 1		 -0.56 0.31 -0.33
118 AT1G68670 myb-like transcription factor family protein -0.55 0.33 -0.32
119 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.34 -0.3
120 AT5G26640 BEST Arabidopsis thaliana protein match is:
anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2);
Has 293 Blast hits to 293 proteins in 137 species: Archae -
0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41;
Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).		 -0.55 0.3 -0.31
121 AT2G07740 transposable element gene -0.55 0.31 -0.32
122 AT1G67860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67865.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0167 MST_1744.8 - - - -0.82 0.44 -0.47