AT3G16090 : homolog of yeast Hrd1
Query Information
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AGICode AT3G16090
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16090 RING/U-box superfamily protein homolog of yeast Hrd1, homolog of
yeast Hrd1		 1 0.3 -0.34
2 AT5G07730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.7 0.32 -0.32
3 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 0.68 0.31 -0.31
4 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.67 0.32 -0.32
5 AT3G26085 CAAX amino terminal protease family protein 0.66 0.31 -0.3
6 AT5G16640 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.31 -0.31
7 AT3G25420 serine carboxypeptidase-like 21 serine carboxypeptidase-like 21 -0.65 0.3 -0.3
8 AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.63 0.31 -0.3
9 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.62 0.31 -0.32
10 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.62 0.31 -0.34
11 AT4G22640 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.32 -0.32
12 AT5G61910 DCD (Development and Cell Death) domain protein 0.62 0.3 -0.31
13 AT2G17910 transposable element gene -0.62 0.32 -0.32
14 AT5G56290 peroxin 5 ARABIDOPSIS PEROXIN 5, EMBRYO
DEFECTIVE 2790, peroxin 5		 0.61 0.31 -0.32
15 AT4G35230 BR-signaling kinase 1 BR-signaling kinase 1 0.6 0.32 -0.31
16 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 0.6 0.31 -0.35
17 AT2G25760 Protein kinase family protein 0.6 0.32 -0.29
18 AT1G79830 golgin candidate 5 golgin candidate 5 0.6 0.3 -0.3
19 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein 0.6 0.31 -0.31
20 AT5G13020 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML3, EMSY-like 3 0.59 0.3 -0.32
21 AT1G01770 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1446 (InterPro:IPR010839); Has 1597
Blast hits to 1509 proteins in 306 species: Archae - 4;
Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31;
Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).		 0.59 0.31 -0.33
22 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.33 -0.32
23 AT3G19610 Plant protein of unknown function (DUF936) -0.59 0.34 -0.31
24 AT2G18920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: synergid; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.59 0.31 -0.3
25 AT2G03840 tetraspanin13 tetraspanin13 -0.58 0.31 -0.31
26 AT4G24630 DHHC-type zinc finger family protein 0.57 0.31 -0.34
27 AT2G18060 vascular related NAC-domain protein 1 Arabidopsis NAC domain containing
protein 37, vascular related
NAC-domain protein 1		 -0.57 0.32 -0.32
28 AT4G02550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits
to 300 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 0.57 0.33 -0.32
29 AT1G48880 TRICHOME BIREFRINGENCE-LIKE 7 TRICHOME BIREFRINGENCE-LIKE 7 -0.57 0.3 -0.31
30 AT2G18970 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.3 -0.31
31 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.57 0.33 -0.3
32 AT4G12840 Protein of unknown function (DUF707) -0.57 0.33 -0.32
33 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.33 -0.31
34 AT2G46190 Mitochondrial glycoprotein family protein -0.56 0.32 -0.32
35 AT1G76850 exocyst complex component sec5 exocyst complex component sec5 0.56 0.33 -0.31
36 AT3G25840 Protein kinase superfamily protein 0.56 0.33 -0.31
37 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 0.56 0.3 -0.31
38 AT4G36960 RNA-binding (RRM/RBD/RNP motifs) family protein 0.56 0.31 -0.29
39 AT2G30600 BTB/POZ domain-containing protein 0.56 0.3 -0.32
40 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 -0.55 0.3 -0.32
41 AT5G61150 leo1-like family protein VERNALIZATION INDEPENDENCE 4 0.55 0.31 -0.33
42 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 -0.55 0.31 -0.34
43 AT1G29820 Magnesium transporter CorA-like family protein -0.54 0.32 -0.32
44 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.35 -0.31
45 AT2G16110 pseudogene, similar to putative AP endonuclease/reverse
transcriptase, blastp match of 34% identity and 5.9e-45
P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305
putative AP endonuclease/reverse transcriptase {Brassica
napus}		 -0.54 0.31 -0.31
46 AT4G27050 F-box/RNI-like superfamily protein 0.54 0.33 -0.31
47 AT5G52740 Copper transport protein family -0.54 0.31 -0.31
48 AT3G44900 cation/H+ exchanger 4 cation/H+ exchanger 4, cation/H+
exchanger 4		 0.54 0.31 -0.31
49 AT1G67760 TCP-1/cpn60 chaperonin family protein -0.54 0.31 -0.33
50 AT5G12940 Leucine-rich repeat (LRR) family protein -0.53 0.32 -0.32
51 AT4G04590 transposable element gene 0.52 0.34 -0.29
52 AT5G58100 unknown protein; INVOLVED IN: pollen exine formation;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.52 0.3 -0.32
53 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.52 0.31 -0.32
54 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION -0.52 0.31 -0.31
55 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.52 0.29 -0.32
56 AT1G70110 Concanavalin A-like lectin protein kinase family protein -0.52 0.31 -0.3
57 AT4G31740 Sec1/munc18-like (SM) proteins superfamily 0.51 0.32 -0.32
58 AT5G24530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DOWNY MILDEW RESISTANT 6 -0.51 0.32 -0.32
59 AT2G34555 gibberellin 2-oxidase 3 gibberellin 2-oxidase 3,
gibberellin 2-oxidase 3		 -0.51 0.31 -0.29
60 AT2G15540 transposable element gene -0.51 0.32 -0.31
61 AT1G69220 Protein kinase superfamily protein SIK1 0.51 0.32 -0.32
62 AT5G65290 LMBR1-like membrane protein 0.51 0.3 -0.3
63 AT1G16150 wall associated kinase-like 4 wall associated kinase-like 4 -0.51 0.31 -0.31
64 AT2G20660 ralf-like 14 ralf-like 14 -0.5 0.31 -0.32
65 AT1G23590 Domain of unknown function DUF220 -0.5 0.33 -0.33
66 AT4G29050 Concanavalin A-like lectin protein kinase family protein -0.5 0.3 -0.32
67 AT5G09490 Ribosomal protein S19 family protein -0.49 0.31 -0.33
68 AT5G42280 Cysteine/Histidine-rich C1 domain family protein -0.48 0.33 -0.31
69 AT1G72060 serine-type endopeptidase inhibitors -0.48 0.31 -0.32
70 AT1G53010 RING/U-box superfamily protein -0.48 0.32 -0.31
71 AT1G63400 Pentatricopeptide repeat (PPR) superfamily protein -0.48 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
72 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.67 0.51 -0.51 C0151
73 C0127 Isorhamnetin-hexosyl-rhamnoside - - - -0.61 0.46 -0.48