AT3G15980 : -
Query Information
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AGICode AT3G15980
Description Coatomer, beta' subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G15980 Coatomer, beta' subunit 1 0.32 -0.31
2 AT4G11380 Adaptin family protein 0.83 0.33 -0.31
3 AT1G71820 SEC6 SEC6 0.79 0.3 -0.31
4 AT1G79600 Protein kinase superfamily protein 0.79 0.29 -0.33
5 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 0.78 0.34 -0.31
6 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 0.76 0.31 -0.31
7 AT3G07100 Sec23/Sec24 protein transport family protein AtSEC24A, ENDOPLASMIC RETICULUM
MORPHOLOGY 2, SEC24A		 0.75 0.32 -0.32
8 AT5G03610 GDSL-like Lipase/Acylhydrolase superfamily protein 0.75 0.3 -0.33
9 AT4G35020 RAC-like 3 RAC-like 3, ATROP6, RAC-like 3,
RHO1PS, RHO-RELATED PROTEIN FROM
PLANTS 6		 -0.75 0.3 -0.29
10 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.75 0.31 -0.33
11 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 0.75 0.31 -0.32
12 AT2G07360 SH3 domain-containing protein 0.75 0.32 -0.32
13 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 0.75 0.33 -0.33
14 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 0.74 0.32 -0.33
15 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 0.74 0.29 -0.33
16 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.74 0.31 -0.31
17 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.73 0.32 -0.29
18 AT4G21180 DnaJ / Sec63 Brl domains-containing protein ATERDJ2B 0.73 0.32 -0.33
19 AT5G15400 U-box domain-containing protein 0.73 0.32 -0.31
20 AT4G31590 Cellulose-synthase-like C5 CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5,
CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5		 0.72 0.34 -0.31
21 AT4G08180 OSBP(oxysterol binding protein)-related protein 1C OSBP(oxysterol binding
protein)-related protein 1C		 0.72 0.32 -0.31
22 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.72 0.32 -0.32
23 AT4G26690 PLC-like phosphodiesterase family protein Glycerophosphodiester
phosphodiesterase (GDPD) like 3,
GLYCEROPHOSPHODIESTERASE-LIKE 2,
MUTANT ROOT HAIR 5, SHAVEN 3		 0.72 0.31 -0.32
24 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.71 0.29 -0.31
25 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 0.71 0.31 -0.32
26 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 0.71 0.29 -0.31
27 AT2G19880 Nucleotide-diphospho-sugar transferases superfamily protein 0.71 0.31 -0.34
28 AT1G31730 Adaptin family protein 0.71 0.34 -0.29
29 AT3G02740 Eukaryotic aspartyl protease family protein 0.71 0.31 -0.33
30 AT4G34500 Protein kinase superfamily protein -0.7 0.34 -0.31
31 AT2G46520 cellular apoptosis susceptibility protein, putative /
importin-alpha re-exporter, putative		 0.7 0.32 -0.33
32 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 0.7 0.32 -0.31
33 AT4G32640 Sec23/Sec24 protein transport family protein 0.7 0.32 -0.3
34 AT3G18860 transducin family protein / WD-40 repeat family protein 0.7 0.3 -0.33
35 AT4G03550 glucan synthase-like 5 glucan synthase-like 5, ATGSL5,
GSL05, glucan synthase-like 5,
GLUCAN SYNTHASE-LIKE 5, POWDERY
MILDEW RESISTANT 4		 0.7 0.33 -0.32
36 AT3G11960 Cleavage and polyadenylation specificity factor (CPSF) A
subunit protein		 0.69 0.3 -0.32
37 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 0.69 0.34 -0.32
38 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.69 0.33 -0.3
39 AT1G61840 Cysteine/Histidine-rich C1 domain family protein -0.69 0.33 -0.32
40 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1		 0.69 0.28 -0.3
41 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 -0.69 0.31 -0.34
42 AT1G51350 ARM repeat superfamily protein 0.69 0.32 -0.32
43 AT5G53410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.32 -0.32
44 AT3G21640 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 ATFKBP42, FK506-BINDING PROTEIN
42, TWISTED DWARF 1, ULTRACURVATA
2		 -0.68 0.33 -0.29
45 AT3G32940 RNA-binding KH domain-containing protein 0.68 0.33 -0.31
46 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.68 0.29 -0.3
47 AT4G11160 Translation initiation factor 2, small GTP-binding protein 0.68 0.31 -0.32
48 AT2G20010 Protein of unknown function (DUF810) 0.68 0.3 -0.3
49 AT1G75550 glycine-rich protein 0.68 0.29 -0.31
50 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 -0.68 0.3 -0.31
51 AT1G35570 transposable element gene 0.68 0.32 -0.3
52 AT3G23790 AMP-dependent synthetase and ligase family protein acyl activating enzyme 16 0.68 0.31 -0.35
53 AT4G25410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.67 0.3 -0.31
54 AT4G38640 Plasma-membrane choline transporter family protein 0.67 0.33 -0.31
55 AT4G34310 alpha/beta-Hydrolases superfamily protein 0.67 0.31 -0.3
56 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.67 0.32 -0.3
57 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.67 0.3 -0.29
58 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 0.67 0.34 -0.34
59 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B 0.67 0.31 -0.31
60 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.67 0.33 -0.3
61 AT2G16950 transportin 1 TRANSPORTIN 1, transportin 1 0.67 0.3 -0.3
62 AT5G06190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.29 -0.32
63 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.67 0.31 -0.3
64 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.67 0.32 -0.34
65 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS -0.67 0.33 -0.3
66 AT1G34260 FORMS APLOID AND BINUCLEATE CELLS 1A FORMS APLOID AND BINUCLEATE CELLS
1A		 0.66 0.34 -0.31
67 AT4G14220 RING-H2 group F1A RING-H2 group F1A 0.66 0.33 -0.29
68 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.66 0.31 -0.32
69 AT3G52640 Zn-dependent exopeptidases superfamily protein 0.66 0.31 -0.32
70 AT5G24860 flowering promoting factor 1 ARABIDOPSIS FLOWERING PROMOTING
FACTOR 1, FLOWERING PROMOTING
FACTOR 1		 0.66 0.32 -0.31
71 AT1G13700 6-phosphogluconolactonase 1 6-phosphogluconolactonase 1 -0.66 0.34 -0.29
72 AT2G42100 Actin-like ATPase superfamily protein -0.66 0.3 -0.32
73 AT1G47240 NRAMP metal ion transporter 2 ATNRAMP2, NRAMP metal ion
transporter 2		 0.66 0.31 -0.32
74 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.66 0.32 -0.31
75 AT2G42120 DNA polymerase delta small subunit DNA polymerase delta small subunit -0.65 0.31 -0.34
76 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.65 0.31 -0.32
77 AT5G67470 formin homolog 6 ARABIDOPSIS FORMIN HOMOLOG 6,
formin homolog 6		 0.65 0.33 -0.31
78 AT4G04910 AAA-type ATPase family protein N-ethylmaleimide sensitive factor 0.65 0.32 -0.32
79 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.65 0.32 -0.29
80 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.31 -0.3
81 AT4G14160 Sec23/Sec24 protein transport family protein 0.65 0.33 -0.33
82 AT3G63180 TIC-like TICKLE, TIC-like 0.65 0.32 -0.33
83 AT1G29140 Pollen Ole e 1 allergen and extensin family protein 0.64 0.33 -0.32
84 AT2G45540 WD-40 repeat family protein / beige-related 0.64 0.32 -0.33
85 AT1G21630 Calcium-binding EF hand family protein 0.64 0.33 -0.34
86 AT1G23350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.64 0.32 -0.32
87 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.64 0.33 -0.31
88 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 -0.64 0.31 -0.32
89 AT5G62900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.34 -0.32
90 AT3G12670 CTP synthase family protein embryo defective 2742 0.64 0.3 -0.3
91 AT1G06340 Plant Tudor-like protein 0.64 0.33 -0.31
92 AT1G75770 unknown protein; Has 6 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.33 -0.31
93 AT5G57410 Afadin/alpha-actinin-binding protein -0.63 0.31 -0.29
94 AT5G08580 Calcium-binding EF hand family protein -0.63 0.33 -0.32
95 AT5G23550 Got1/Sft2-like vescicle transport protein family -0.63 0.31 -0.33
96 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.62 0.33 -0.29
97 AT5G03970 F-box associated ubiquitination effector family protein -0.61 0.33 -0.31
98 AT5G38700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible, LP.12 twelve leaves visible; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.34 -0.33
99 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.34 -0.3
100 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 -0.61 0.32 -0.34
101 AT4G04530 transposable element gene -0.61 0.32 -0.3
102 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 -0.61 0.31 -0.3
103 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.6 0.32 -0.31
104 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.6 0.32 -0.31
105 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 -0.6 0.3 -0.31
106 AT4G37770 1-amino-cyclopropane-1-carboxylate synthase 8 1-amino-cyclopropane-1-carboxylate
synthase 8		 -0.6 0.29 -0.31
107 AT3G13062 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.6 0.33 -0.32
108 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein -0.59 0.31 -0.31
109 AT1G13470 Protein of unknown function (DUF1262) -0.59 0.32 -0.31
110 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.59 0.32 -0.33
111 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.3
112 AT2G07180 Protein kinase superfamily protein -0.59 0.32 -0.31
113 AT1G60010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.58 0.35 -0.34
114 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.58 0.31 -0.32
115 AT1G49350 pfkB-like carbohydrate kinase family protein -0.58 0.33 -0.32
116 AT3G58620 tetratricopetide-repeat thioredoxin-like 4 tetratricopetide-repeat
thioredoxin-like 4		 -0.58 0.3 -0.32
117 ATMG00740 hypothetical protein ORF100A -0.58 0.29 -0.3
118 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.58 0.32 -0.33
119 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.58 0.33 -0.32
120 AT5G55780 Cysteine/Histidine-rich C1 domain family protein -0.57 0.33 -0.32
121 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.57 0.34 -0.31
122 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.32
123 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.57 0.32 -0.34
124 AT5G25210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0074 Cystine L-Cystine L-Cystine protein precursor 0.85 0.44 -0.43 C0074
126 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.68 0.43 -0.47 C0233